prot_L-elsbetiae_contig6735.15479.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6735.15479.1
Unique Nameprot_L-elsbetiae_contig6735.15479.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length519
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6735.15479.1 vs. uniprot
Match: D7FLJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ4_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.770e-6
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:   99 RLANYQRVESIDWAAVDVSMRHVVSWPRRVQRLSFVEEFNQDLRCVL 145
            RLA YQRV  + WAA+ VS++ +VSWP  V+RL+F+E FNQDLR VL
Sbjct:   17 RLARYQRVLHVVWAALGVSIQRIVSWPGGVRRLTFLEGFNQDLRWVL 63
[Close]
BLAST of mRNA_L-elsbetiae_contig6735.15479.1 vs. uniprot
Match: A0A6H5JK24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK24_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.960e-5
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   99 RLANYQRVESIDWAAVDVSMRHVVSWPRRVQRLSFVEEFNQDLRCVL 145
            RLA YQRV  + WAA+ VS++ +VSWP    RL+F+E+F+QDLR VL
Sbjct:   17 RLARYQRVLHVVWAALGVSIQRIVSWPGGEGRLTFLEDFDQDLRWVL 63
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6735.15479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLJ4_ECTSI1.770e-661.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK24_9PHAE1.960e-557.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 379..421
e-value: 4.0E-5
score: 23.7
coord: 159..200
e-value: 2.1E-7
score: 31.0
coord: 225..266
e-value: 1.9E-5
score: 24.7
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 125..290
coord: 286..506
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 125..290
coord: 286..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6735contigL-elsbetiae_contig6735:2498..7100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6735.15479.1mRNA_L-elsbetiae_contig6735.15479.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6735 2498..7100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6735.15479.1 ID=prot_L-elsbetiae_contig6735.15479.1|Name=mRNA_L-elsbetiae_contig6735.15479.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=519bp
MKPSPELSSPSALAALRIAFIWGYGPHQQLQLTSVGLCNACREAIPVRLT
LTDLMPPSLHSLFFHRHHPPTSPLDNCAGSGSRSGVDSSSCLSSAHTSRL
ANYQRVESIDWAAVDVSMRHVVSWPRRVQRLSFVEEFNQDLRCVLWPEGL
RELTFREGFNTPIEGVEFPNGLIKLSLGADFDQPVENVDFPPGLTFLSFG
AAFNHPIEGIKWSNSLSEIIWGDCFNQPIEGVCWPRPLRAIKLGDAFNFP
VEQSVFPRQLESLQMGAAFDQAVEGVRFPPLIENLTFGYHFNHPVAGVSW
PQGLREVSFGFEFDRTLARVDWPPGVESVVVGYRFNKPLDDVHWPPALSR
LSLGESFNLPLQDVRWPRGLKELDLGDDFNQPLEGVNLPAGLERLYLSVF
FNQPVLGMRWPEALLELDFGLSFDMPIEGVTFPRGLQSLCFGRSFNQDVR
RVCWPEGLLRIAFGKAFVGALEGDSWPPPRILVLDLGSKHHAKHPIDESK
LRDGCRVCYLHASNSDDY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP