prot_L-elsbetiae_contig6732.15476.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6732.15476.1
Unique Nameprot_L-elsbetiae_contig6732.15476.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A6H5L7D8_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7D8_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 6.480e-110
Identity = 156/198 (78.79%), Postives = 175/198 (88.38%), Query Frame = 0
Query:    2 RIGSRVLTQNSPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPVGNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRAAVKSRGFECALCGCRHGSFPEDRFPTPKGFEAGREVGSSGGG 199
            R  S VL+QNSPSMRRIMSEWKQVQA+GLAMG+G  S++GNSS+TFRLKPVGNMFEWHFTFLGAK +PFEGGLYHGSISLP NYP+SGPSVRLL+ N RFK+GSRICLSASEYHQ+TWQPSWTV SLV+ALVAHMTE A EIG+VRGATPSQKR+AAVKSR F CA CGC H +FPEDRFP PKGF+ G++ G+   G
Sbjct:   28 RRSSHVLSQNSPSMRRIMSEWKQVQADGLAMGQGHWSSKGNSSETFRLKPVGNMFEWHFTFLGAKDSPFEGGLYHGSISLPENYPQSGPSVRLLNTNMRFKVGSRICLSASEYHQETWQPSWTVASLVSALVAHMTEAAVEIGAVRGATPSQKRKAAVKSRSFVCAACGCCHDAFPEDRFPIPKGFDKGKKAGAGADG 225          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: W7TJJ9_9STRA (Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJJ9_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.410e-45
Identity = 78/168 (46.43%), Postives = 116/168 (69.05%), Query Frame = 0
Query:   14 SMRRIMSEWKQVQAEGLAM---GEGASSARGNSSDTFRLKPV-GNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRAAVKSRGFECALCGCRHGSFP 177
            S RR++ EW+ + AEGL +   GEG  S   N+++  RL P  GN+ EWHF+  G  G+ +EGG+YHG + LPANYP++ P +++L+P+ RF++G+ ICLSA+ +HQ+TWQP WTV +LV+AL +HM  PA E+G +   +  +++  A +SRGF C  CG  H +FP
Sbjct:   53 SYRRLIKEWRGIMAEGLVLMDSGEGNCSLS-NNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGME-CSARRRKFLARRSRGFLCRGCGVDHSNFP 218          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A4D9CVX3_9STRA (UBC core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVX3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.020e-41
Identity = 70/154 (45.45%), Postives = 107/154 (69.48%), Query Frame = 0
Query:   27 AEGLAMGE--GASSARGNSSDTFRLKPV-GNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRAAVKSRGFECALCGCRHGSFP 177
            AEGL + +  G + +  N+++  RL P  GN+ EWHF+  G  G+ +EGG+YHG + LPANYP++ P +++L+P+ RF++G+ ICLSA+ +HQ+TWQP WTV +LV+AL +HM  PA E+G +   +  +++  A +SRGF C  CG  H +FP
Sbjct:    2 AEGLVLVDSGGGNCSLSNNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGME-CSARRRKFLARRSRGFLCRGCGVDHSNFP 154          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A7R9YPR8_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPR8_DIALT)

HSP 1 Score: 140 bits (354), Expect = 5.320e-38
Identity = 70/169 (41.42%), Postives = 105/169 (62.13%), Query Frame = 0
Query:   11 NSPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPV-GNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGA--TPSQKRRAAVKSRGFECALCGCRHGSF 176
            N PS++RI+ E ++++ E               SD FR  P+  N+FEWHFT  G  GTPFEGG YHG + +PA+YP   P++ +L+PN RF++  RICLS S++H + WQP+W V +++TAL+A    PA   G++ G   T +++ R AV+S  + C +CG R  +F
Sbjct:   11 NLPSVKRILQETRELELE--------------PSDQFRAAPLEDNLFEWHFTVRGPDGTPFEGGRYHGRLLMPADYPFKPPTIMMLTPNGRFEVRKRICLSISDFHPEQWQPAWGVRTIMTALIAFFPSPAD--GAIGGLDYTAAERERLAVRSAAWHCEMCGERMAAF 163          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A5J4Z378_PORPP (Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z378_PORPP)

HSP 1 Score: 142 bits (358), Expect = 2.890e-37
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 0
Query:   14 SMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPVGN-MFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRA-AVKSRGFECALCGCRHGSFPED 179
            +++RIM E K++Q E    G             F   P+ N +FEWHFT  G   T F+GGLYHG I LPA YP   P + LL+PN RF++G+RICLS + +HQ+TWQPSW + +++TAL+  M   A  +GS+    P++ RRA A KS  F+C +CGC+     ED
Sbjct:    9 AVKRIMLEVKELQREAQLPGS-----------FFHASPLENDLFEWHFTVKGPPDTAFQGGLYHGRIILPAEYPMKAPEIVLLTPNGRFEVGTRICLSITSHHQETWQPSWGIRTILTALIGFMPSKAEGLGSLN--FPAEDRRALAAKSIAFQCPICGCKVKELFED 163          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A7S2Y1G6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1G6_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.120e-37
Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = 0
Query:   41 GNSSDTFRLKPVG-NMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASE-YHQDTWQPS-WTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRA-AVKSRGFECALCGCRHGSFPEDRFPT 183
            G + +  RL P+  N+FEWHFTF G  G+ FEGG+YHG++ LP+NYP S P + +L+P+ RF++G  ICL+    YH + W P  WT+ +LVTAL  HM     EIG +   T S+KRR  A+ SR   C  CGCRH  FP   FP 
Sbjct:    2 GEAEEDIRLAPLTKNLFEWHFTFAGPPGSAFEGGVYHGAVILPSNYPSSAPHIMMLTPSGRFQVGVPICLAGGTGYHPEAWNPGQWTIQALVTALRQHMLTAPTEIGGIH--TSSEKRRQLALLSRMHSCGQCGCRHREFPGKVFPN 146          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A8J6C2I1_DIALT (UBC core domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C2I1_DIALT)

HSP 1 Score: 140 bits (354), Expect = 1.020e-36
Identity = 70/169 (41.42%), Postives = 105/169 (62.13%), Query Frame = 0
Query:   11 NSPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPV-GNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGA--TPSQKRRAAVKSRGFECALCGCRHGSF 176
            N PS++RI+ E ++++ E               SD FR  P+  N+FEWHFT  G  GTPFEGG YHG + +PA+YP   P++ +L+PN RF++  RICLS S++H + WQP+W V +++TAL+A    PA   G++ G   T +++ R AV+S  + C +CG R  +F
Sbjct:   10 NLPSVKRILQETRELELE--------------PSDQFRAAPLEDNLFEWHFTVRGPDGTPFEGGRYHGRLLMPADYPFKPPTIMMLTPNGRFEVRKRICLSISDFHPEQWQPAWGVRTIMTALIAFFPSPAD--GAIGGLDYTAAERERLAVRSAAWHCEMCGERMAAF 162          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: UPI001D06B70F (ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06B70F)

HSP 1 Score: 132 bits (333), Expect = 9.010e-34
Identity = 75/189 (39.68%), Postives = 106/189 (56.08%), Query Frame = 0
Query:   12 SPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPVG-NMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPA-AEIGSVRGATPSQKRRAAVKSRGFECALCG--CRHGSFPEDRFPTPKGFEAGREVGSS 196
            SP ++R+M E  +++                 ++ +  KP+  N+FEWHFT  G  GT FEGGLYHG I LP  YP   P++ LL+PN RF+I  +ICLS S YH ++WQPSW++ + + AL+A M  P    IGS+   TP +++  A KS+ +EC LCG  C H           K  E G  +GS+
Sbjct:   11 SPGVKRLMREAAELR---------------EPTEEYSAKPLDDNLFEWHFTVRGPSGTEFEGGLYHGRILLPTQYPMQPPNIILLTPNGRFEINKKICLSISGYHPESWQPSWSIRTALLALIAFMPSPGRGTIGSL-DYTPEERQILAKKSQTWECELCGKLCDH---------LAKEDEGGHRLGSA 174          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A8J9XM55_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9XM55_BRAAE)

HSP 1 Score: 129 bits (325), Expect = 1.210e-32
Identity = 69/161 (42.86%), Postives = 98/161 (60.87%), Query Frame = 0
Query:   12 SPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLKPV-GNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAA-EIGSVRGATPSQKRRAAVKSRGFECALCG 170
            SP ++R+M E     A  LA          N ++ +   P+  N+FEWHFT  G   T FEGG YHG I LP+ YP   P++ LL+PN RF++  +ICLS S +H +TWQPSW++ + + AL+A M  P+A  IGS+   TP ++R  A+KS+ +EC  CG
Sbjct:   11 SPGVKRLMRE-----AVELA----------NPTEEYFATPLEDNLFEWHFTVRGPSATEFEGGYYHGRILLPSQYPMQPPNIILLTPNGRFEVNKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPSAGTIGSL-DYTPDERRILALKSKNWECTTCG 155          
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Match: A0A0T6BEW5_9SCAR (Ubiquitin-conjugating enzyme n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6BEW5_9SCAR)

HSP 1 Score: 130 bits (326), Expect = 1.350e-32
Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0
Query:   54 NMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQRFKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGATPSQKRRAAVKSRGFECALCG 170
            N+FEWHFT  G  GT F+GGLYHG I LP  YP   P++ LL+PN RF++  +ICLS S YH ++WQPSW++ + + AL+A M  PAA        TP +++  A KS+ F C +CG
Sbjct:   40 NLFEWHFTVRGPPGTEFDGGLYHGRILLPTQYPMQPPNIILLTPNGRFEVNKKICLSISGYHPESWQPSWSIRTALLALIAFMPTPAAGTVGSLDYTPDERKTLARKSKNFVCHVCG 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6732.15476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7D8_9PHAE6.480e-11078.79UBC core domain-containing protein n=2 Tax=Ectocar... [more]
W7TJJ9_9STRA2.410e-4546.43Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannoch... [more]
A0A4D9CVX3_9STRA5.020e-4145.45UBC core domain-containing protein n=1 Tax=Nannoch... [more]
A0A7R9YPR8_DIALT5.320e-3841.42Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A5J4Z378_PORPP2.890e-3744.05Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyr... [more]
A0A7S2Y1G6_9STRA3.120e-3747.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J6C2I1_DIALT1.020e-3641.42UBC core domain-containing protein n=1 Tax=Diacron... [more]
UPI001D06B70F9.010e-3439.68ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Ch... [more]
A0A8J9XM55_BRAAE1.210e-3242.86Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A0T6BEW5_9SCAR1.350e-3248.72Ubiquitin-conjugating enzyme n=1 Tax=Oryctes borbo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 16..177
e-value: 5.0E-16
score: 69.3
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 10..180
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 10..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..267
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 268..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..245
NoneNo IPR availableTMHMMTMhelixcoord: 245..267
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 5..179
e-value: 1.7E-41
score: 143.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 15..171
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 42..142
e-value: 2.6E-14
score: 53.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 16..139
score: 18.104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6732contigL-elsbetiae_contig6732:6796..9713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6732.15476.1mRNA_L-elsbetiae_contig6732.15476.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6732 6796..9713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6732.15476.1 ID=prot_L-elsbetiae_contig6732.15476.1|Name=mRNA_L-elsbetiae_contig6732.15476.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
SRIGSRVLTQNSPSMRRIMSEWKQVQAEGLAMGEGASSARGNSSDTFRLK
PVGNMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLSPNQR
FKIGSRICLSASEYHQDTWQPSWTVTSLVTALVAHMTEPAAEIGSVRGAT
PSQKRRAAVKSRGFECALCGCRHGSFPEDRFPTPKGFEAGREVGSSGGGA
GGARTGGPSGGGGKGLAGVGGAAGAAERAREGPLSRTIVRLLRDVSLLRS
LLLTLALVYASALWLNLPSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2