prot_L-elsbetiae_contig6731.15474.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6731.15474.1
Unique Nameprot_L-elsbetiae_contig6731.15474.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length151
Homology
BLAST of mRNA_L-elsbetiae_contig6731.15474.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-10
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 0
Query:    1 MTAQNLDGTISITTSVPCAAGSSMDICMVQYDVNLPEPTEPLEPSGG----------ASRRLTERSSARQDHTSSHDARDSAPSSRRNLQSTVEVDVMVLYD-EAALERGFVTTPEQMETLIADELPFSTEAAENSRI-NLRFNLVHAGQLPYT 142
            + ++N DG+ SI TSVPC+AGSS ++CMV+ ++   + +E ++ +             SR L E+  +   +T     R     S R+LQ+T  +DV+++Y  EAA  RG      Q+ T I + +    +A  NS I  L + LV   +LPY+
Sbjct:   70 LVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHDESEAVDTTQSXXXXXXXKDQGSRMLKEQRVS-MTYTEEESLRSQGLPSDRSLQATTVIDVLIVYSPEAAYARGIAEA--QLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYS 220          
BLAST of mRNA_L-elsbetiae_contig6731.15474.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.610e-10
Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 0
Query:    1 MTAQNLDGTISITTSVPCAAGSSMDICMVQYDVNLPEPTEPLEPSGG----------ASRRLTERSSARQDHTSSHDARDSAPSSRRNLQSTVEVDVMVLYD-EAALERGFVTTPEQMETLIADELPFSTEAAENSRI-NLRFNLVHAGQLPYT 142
            + ++N DG+ SI TSVPC+AGSS +ICMV+ ++   + +E  +               SR L ER  +   +T     R    SS R LQ T  +DV+++Y  EAA  RG      Q+ T I + +    +A  NS I  L + LV   +LPY+
Sbjct:   81 LVSRNADGSTSIFTSVPCSAGSSNEICMVELEMFFHDESETEDTXXXXXXXXXXKDQGSRMLKERRVSTT-YTEEGSLRSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEA--QLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYS 231          
BLAST of mRNA_L-elsbetiae_contig6731.15474.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.020e-8
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 0
Query:    1 MTAQNLDGTISITTSVPCAAGSSMDICMVQYDVNLPEPTEPLEPSGGAS----------RRLTERSSARQDHTSSHDARDSAPSSRRNLQSTVEVDVMVLYD-EAALERGFVTTPEQMETLIADELPFSTEAAENSRI-NLRFNLVHAGQLPYT 142
            + ++N DG+ SI TSVPC+AGSS +ICMV+      + ++ ++ S  +S          R L ER  +              PS R +LQ T  +DV++ Y  EAA   G   +  Q+ T I + +    +A  NS I +L + LVH  +LPY+
Sbjct:  259 LVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDAVDTSQSSSSSSTSKYQGSRMLKERRVSTTFMEEGSRWSQGIPSDR-SLQGTTVIDVLIFYSPEAASSEGI--SDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYS 409          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6731.15474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTV1_ECTSI1.100e-1032.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRC1_9PHAE4.610e-1034.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE1.020e-833.12LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6731contigL-elsbetiae_contig6731:7810..10699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6731.15474.1mRNA_L-elsbetiae_contig6731.15474.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6731 7810..10716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6731.15474.1 ID=prot_L-elsbetiae_contig6731.15474.1|Name=mRNA_L-elsbetiae_contig6731.15474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
MTAQNLDGTISITTSVPCAAGSSMDICMVQYDVNLPEPTEPLEPSGGASR
RLTERSSARQDHTSSHDARDSAPSSRRNLQSTVEVDVMVLYDEAALERGF
VTTPEQMETLIADELPFSTEAAENSRINLRFNLVHAGQLPYTVGSQNDNT
E
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