prot_L-elsbetiae_contig1010.154.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1010.154.1
Unique Name	prot_L-elsbetiae_contig1010.154.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	340

Homology

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BLAST of mRNA_L-elsbetiae_contig1010.154.1 vs. uniprot
Match: D7FP77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP77_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 4.170e-107
Identity = 202/371 (54.45%), Postives = 230/371 (61.99%), Query Frame = 0

Query:    1 MAG-TQVSPRVSLTSSIESSHAFSVSRVLSNGNGGVVSSVIWLTISAGLCFPWLLEQPSATKAGETPKSVAWFLVLALDLLIGTMSVFSLWFQRSTLSIMLLVWGTGGILATFVMGSFAMLPAVATICCCAEEFCVMGAADTTPLDDSYCLAPVDLCMETKWALWCYFGGILLAMISIVLLVNSVALHHKTLLDCERQRNEAAKAIRAANRSRRRRQELWEQEIYGGSYTGSNGGGMRATHGRRDGPDGSTTA------MPHRADRSTPRHA----TVAPSFGSPAHSHRPPPQAPATRLELG--RVTPPGPFASFGLRGDTDVDIEMSRLGSPTSAPMSLAGGD------------------FAIGAYTG 340
            MAG  + S R S TSS  SS  FS SRVLSNG  GVVSSVIW+ ISAGLCFPWLLEQPSA+KAG++PKSVAWF+VLA+DLLIG MSVFSLWF+RSTLSIMLL+WG GGI+ TF+MGSFAMLPAVATICCCAEE CV+GAAD +PLDDS+C   ++LCMETKW+LWCY+GGILLAM SIVLLVNSVALHHKTLLDCER                                                              + + A+ S+ R       +APSF SP   +   P+ P    E+G  RVTPP  FA+    G TD  IEMSRLGSPTSA MS +G D                  F IGAYTG
Sbjct:    1 MAGPAEASSRASPTSSFNSSQEFSASRVLSNGTCGVVSSVIWIIISAGLCFPWLLEQPSASKAGDSPKSVAWFVVLAIDLLIGAMSVFSLWFRRSTLSIMLLIWGAGGIVVTFLMGSFAMLPAVATICCCAEELCVLGAADISPLDDSFCHTTLELCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKTLLDCERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNPAETSSSRGRGGAPAIAPSFESPTRGY---PRKPVATAEVGGGRVTPPVEFAALDPTGGTD--IEMSRLGSPTSAAMSQSGQDEGDGNFGGEXXXXXXXXXFTIGAYTG 366

[Close]

BLAST of mRNA_L-elsbetiae_contig1010.154.1 vs. uniprot
Match: A0A6H5JN85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN85_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 7.110e-96
Identity = 215/485 (44.33%), Postives = 247/485 (50.93%), Query Frame = 0

Query:    1 MAG-TQVSPRVSLTSSIESSHAFSVSRVLSNGNGGVVSSVIWLTISAGLCFPWLLEQPSATKAGETPKSVAWFLVLALDLLIGTMSVFSLWFQRSTLSIMLLVWGTGGILATFVMGSFAMLPAVATI----------------------CCCAEEFCVMGAADTTPLDDSYCLAPVDLCMETKWALWCYFGGILLAMISIVLLVNSVALHHK---------------------------------------------------------------------------------------------TLLDCERQRNEAAKAIRAANRSRRRRQELWEQEIYGGSYTGSNGGGMRATHGRRDGPDGST------TAMPHRADRSTPRHA----TVAPSFGSPAHSHRPPPQAPATRLEL--GRVTPPGPFASFGLRGDTDVDIEMSRLGSPTSAPMSLAGGD-----------------FAIGAYTG 340
            MAG  + S R S TSS  SS  FS SRVLSNG  GVVSSVIW+ ISAGLCFPWLLEQP A+KAG++PKSVAWF+VLA+DL IG MSVFSLWF+RSTLSIMLL+WG GGI+ATF++GSFAMLPAVAT+                      CCCAEE CV+GAAD +PLDDS+C   ++LCMETKW+LWCY+GGILLAM SIVLLVNSVALHHK                                                                                             TLLDCER+ NEAAKAIRAANRSRR                                           T + + A+ ++ R       VAPSF SPA  +   P+ P    E+   RVTPP  FA+     DTD  IEMSRLGSPTSA MS +G D                 F+IGAYTG
Sbjct:    1 MAGPAEASSRASSTSSFNSSQEFSASRVLSNGACGVVSSVIWIIISAGLCFPWLLEQPPASKAGDSPKSVAWFVVLAIDLSIGAMSVFSLWFRRSTLSIMLLIWGAGGIVATFLVGSFAMLPAVATMSTSSFTMSTSCATANPVDLGGRCCCAEELCVLGAADISPLDDSFCYTTLELCMETKWSLWCYYGGILLAMTSIVLLVNSVALHHKVLGRKEIVHLVQTQHDLLSKTQKNVPQQIIMRSSLTDVVGSGVVENLVGMEEVEEVDVADTVKTKQGRVRSEPHKARTHRTQDTLQSNRPIEETLLDCERRWNEAAKAIRAANRSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLLNPAETASSRGRGGAPAVAPSFESPARGY---PRKPVATAEVCGDRVTPPVEFAALYPARDTD--IEMSRLGSPTSAAMSQSGQDEGDGNFGXXXXXXXXXXFSIGAYTG 480

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1010.154.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1010.154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FP77_ECTSI	4.170e-107	54.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JN85_9PHAE	7.110e-96	44.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 194..214
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..117
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 161..181
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 182..340
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 69..91
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 118..160
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 55..68
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..54
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 92..97
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 98..120
None	No IPR available	TMHMM	TMhelix		coord: 32..54
None	No IPR available	TMHMM	TMhelix		coord: 164..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1010	contig	L-elsbetiae_contig1010:11509..14342 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1010.154.1	mRNA_L-elsbetiae_contig1010.154.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1010 11509..14342 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1010.154.1 ID=prot_L-elsbetiae_contig1010.154.1|Name=mRNA_L-elsbetiae_contig1010.154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
MAGTQVSPRVSLTSSIESSHAFSVSRVLSNGNGGVVSSVIWLTISAGLCF
PWLLEQPSATKAGETPKSVAWFLVLALDLLIGTMSVFSLWFQRSTLSIML
LVWGTGGILATFVMGSFAMLPAVATICCCAEEFCVMGAADTTPLDDSYCL
APVDLCMETKWALWCYFGGILLAMISIVLLVNSVALHHKTLLDCERQRNE
AAKAIRAANRSRRRRQELWEQEIYGGSYTGSNGGGMRATHGRRDGPDGST
TAMPHRADRSTPRHATVAPSFGSPAHSHRPPPQAPATRLELGRVTPPGPF
ASFGLRGDTDVDIEMSRLGSPTSAPMSLAGGDFAIGAYTG