mRNA_L-elsbetiae_contig6633.15358.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: UPI000BA81ED7 (exportin-6-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA81ED7) HSP 1 Score: 98.2 bits (243), Expect = 2.650e-20 Identity = 45/132 (34.09%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 28 FVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLAEV 423 +V+ +C T +E I +RW + +++ +R L+++L + H+S+P ++ KLGK +VD+G++ WP PDF T ++QL T +GL LL SEE P L RK+EL+ L+ +P++L ++ + Sbjct: 59 YVIMYCLTMLEQLINKRWVGMLGQDKGEIRSTLYRFLLSHHSSVPPFIRNKLGKLVVDIGRLDWPHFYPDFFTNILQLTQSSETISVGLMLLQTASEELACPREDLSVSRKEELQRLLLEQVPTVLSIITNI 190
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: UPI0015ADE4D6 (exportin-6-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADE4D6) HSP 1 Score: 94.0 bits (232), Expect = 3.130e-20 Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 28 FVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLA 417 +VL +C T +E I + W +P ++ +R L +++ + H +P ++ KLGK +VD+G++ WP PDF + QLA T LGL L+ EEF P L RK+EL ++ +P +L +LA Sbjct: 59 YVLMYCLTVLEHIINKVWIRMPGPDKAELRTRLHRFMISHHLKVPNFICNKLGKLVVDIGRLDWPHFFPDFFMNIHQLAQAPETAPLGLMLIQTAFEEFTSPREDLAVTRKEELHRLMLEQVPVVLNILA 188
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A4Y2H3X4_ARAVE (Exportin-6 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H3X4_ARAVE) HSP 1 Score: 94.4 bits (233), Expect = 5.440e-19 Identity = 45/130 (34.62%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 28 FVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLA 417 FV+ +C T +E I + W +P ++ +R L ++ +H +P ++ KLGK +VD+G++ WP PDF + QLA T LGL L+ EEF P L RK+EL ++ +P +L +LA Sbjct: 59 FVMMYCLTVVEHIINQMWIRMPAPDKAELRTTLRIFMTTNHQKVPTFICNKLGKLIVDIGRLDWPHFYPDFFMNIHQLAQAPETAPLGLMLIQTAFEEFTSPREDLAVTRKEELHRLMLEQVPIVLNILA 188
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A087UFN4_STEMI (Exportin-6 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087UFN4_STEMI) HSP 1 Score: 90.9 bits (224), Expect = 2.660e-18 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 40 FCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLA 417 +C T +E I++ W +P ++ +R L +++ + H +P ++ KLGK +VD+G++ WP PDF + QLA T LGL L+ EEF P L RK+EL ++ +P +L +LA Sbjct: 2 YCLTVLEHIIKKVWIRMPGPDKAELRTRLHRFMISHHLKVPNFICNKLGKLVVDIGRLDWPHFFPDFFMNIHQLAQAPETAPLGLMLIQTAFEEFTSPREDLAVTRKEELHRLMLEQVPVVLNILA 127
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A1D1W415_RAMVA (Xpo1 domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W415_RAMVA) HSP 1 Score: 84.7 bits (208), Expect = 1.240e-15 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 28 FVLYFCGTTIEGAIRRRWSTIPKEERLN-VRKFLFQYLAASHAS--LPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVL 414 +V++FC + + WST EE+ N +++ L Y++ H S P +++TKL K VD+G+ WP++ PDFL+ + R GL +L LVSEEF+ + + RK L+A+L IP+ ++++ Sbjct: 66 YVVWFCLNCLNDFVSNFWSTWALEEQKNYIKQRLLWYMSTKHVSTSFPSFILTKLLKVFVDIGRNDWPEKYPDFLSHIESFVKEAELRSTGLRMLRLVSEEFISSRTDMSQSRKSILKANLSQRIPTWMELV 197
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A6B2KXC9_9EUKA (Xpo1 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXC9_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 4.140e-15 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 31 VLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLAEVFA 429 V ++ + ++ +++ WS + +R+ +++ + L + P +++ ++ K VD+G+V WP E P+FL E++ G T VLGL +L +VSEEF +P RK E+++ L+ IP+I +L + A Sbjct: 53 VFFYMVSLLDEWVKKAWSHLAAADRVEIKRCVGTMLQ-HYKQFPSFILVQVVKLHVDIGRVEWPNEYPEFLNEILNYIKGGETTVLGLIILKVVSEEFGTSKEDIPYARKIEIKSLLISRIPTIFSILTNILA 184
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: D7FPD5_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD5_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 5.340e-15 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 Query: 1 GQRREQQDLFVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQ 132 GQRREQ++LFVLYFCGTTIEG I +RW+ IPKEERL+VRK LFQ Sbjct: 49 GQRREQENLFVLYFCGTTIEGGIPKRWNAIPKEERLHVRKTLFQ 92
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A1W0X612_HYPDU (Exportin-6 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X612_HYPDU) HSP 1 Score: 81.6 bits (200), Expect = 1.440e-14 Identity = 59/199 (29.65%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 19 QDLFVLYFCGTTIEGAIRRRWST-IPKEERLNVRKFLFQYLAASH---------ASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHGATRVLGLGLLSLVSEEFVRPDSPLPDVRKKELRASLVWAIPSILQVLAEVFAASRDTAAGVGQGVTADTVRAAREAVLEAARCMLVIVSWAPLTEHLTIDLFRS 585 Q+ FV+ C + + W+T E++ ++ L YL S + LP +VVTKL K +VD+G+ WP P+F + +L V+GL +L LVSEEF+ P L RK EL+ L +P I +L V D G G + D +A ++A + + I++W P +L +L + Sbjct: 58 QNQFVIMQCLNLLGDFVANFWATWATTEQKEYIKNRLLHYLDQSGNFQSSILAPSPLPNFVVTKLMKLVVDIGRSDWPGAYPNFFDHIEELVRDPRRSVMGLRMLKLVSEEFMHPKEDLRRSRKDELKNGLTQRVPVIFGLLHGVLQPFLDVMKG-GSALPVDAQKALVARCVDALQVLNDILTWIPAKYYLPPELLSA 255
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A2R5G6T3_9STRA (Exportin-6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6T3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.660e-14 Identity = 53/189 (28.04%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 13 EQQDLFVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHA-SLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHG--ATRVLGLGLLSLVSEEFVRPDSP--LPDVRKKELRASLVWAIPSILQVLAEVFAASRDTAAGVGQGVTADTVRAAREAVLEAARCMLVIVSWAPLTEHL 564 + ++ + ++F ++E ++ RW+++ K + VR F+ +Y H +LP+++VTKL K +V++ K WP+ P FL ++M + T GL +L L EEF +S + R+KELR L +P I+ +++ V T+ V +G T V A + + +++WA L++ L Sbjct: 50 DSKNEYAIWFACLSLEHVVQTRWTSVTKRD--EVRSFVMRYALRQHGGALPKYIVTKLAKVVVEMAKHDWPKRYPSFLQDIMSACAQSDETTSTAGLQILLLAIEEFALENSKAVVTSTRQKELRELLKRELPGIINIVSNVLRHGLGTS-NVTEGRTLPRVSLAFSILQQ-------VLAWAQLSQVL 228
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Match: A0A835Z2S8_9STRA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.420e-12 Identity = 30/60 (50.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 22 DLFVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHASLPRWVVTKLGKALVD 201 DL++LYF G +E + RRW + ++ER +R+FLF ++ S +LPRWV+TK+GKALVD Sbjct: 59 DLYLLYFAGAILEELVLRRWDSTQRDERRQLRQFLFAFVVDSWRTLPRWVLTKVGKALVD 118 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6633.15358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6633.15358.1 >prot_L-elsbetiae_contig6633.15358.1 ID=prot_L-elsbetiae_contig6633.15358.1|Name=mRNA_L-elsbetiae_contig6633.15358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp GQRREQQDLFVLYFCGTTIEGAIRRRWSTIPKEERLNVRKFLFQYLAASHback to top mRNA from alignment at L-elsbetiae_contig6633:259..4712+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6633.15358.1 ID=mRNA_L-elsbetiae_contig6633.15358.1|Name=mRNA_L-elsbetiae_contig6633.15358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4454bp|location=Sequence derived from alignment at L-elsbetiae_contig6633:259..4712+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6633:259..4712+ >mRNA_L-elsbetiae_contig6633.15358.1 ID=mRNA_L-elsbetiae_contig6633.15358.1|Name=mRNA_L-elsbetiae_contig6633.15358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig6633:259..4712+ (Laminarionema elsbetiae ELsaHSoW15)back to top |