mRNA_L-elsbetiae_contig6632.15356.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: D7FNL5_ECTSI (Short-chain alcohol dehydrogenase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL5_ECTSI) HSP 1 Score: 341 bits (875), Expect = 3.700e-117 Identity = 176/202 (87.13%), Postives = 186/202 (92.08%), Query Frame = 1 Query: 1 FIYRRKNTPAASSLFDD-PNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDRNTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 F RRK TP ASSLFD+ PNIHVVDGVDVT D GAGCLV ALEKAG+P+VD+LINNAGVMKRDRNTLDI VLRESMEVNAYGALRI+ LL +++LAAPG KIILITSKMGSMADN+SGGAYGYRMSKAALNAAGVSLAHDLKGDGM+VAILHPGWVRTRMTGDSGLVDT ESVAGMT RIEEL LSNSGTFWGFKGDVIPW Sbjct: 37 FACRRKATPDASSLFDNNPNIHVVDGVDVTMDEGAGCLVSALEKAGSPKVDVLINNAGVMKRDRNTLDIGVLRESMEVNAYGALRITNTLLGKRMLAAPGAKIILITSKMGSMADNSSGGAYGYRMSKAALNAAGVSLAHDLKGDGMAVAILHPGWVRTRMTGDSGLVDTHESVAGMTDRIEELDLSNSGTFWGFKGDVIPW 238
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: A0A7Z9G4R6_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Z9G4R6_9DELT) HSP 1 Score: 188 bits (477), Expect = 6.110e-57 Identity = 105/198 (53.03%), Postives = 140/198 (70.71%), Query Frame = 1 Query: 13 RKNTPAASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 RK++P SL + V GVDV++D L L G+ ++D+LINNAG+++R+ LD+D + E +VN+ G LR+ TA L ++ A G K+ +I+S+MGS+ADN+SG YGYRMSKAA+N AGVSLA DLK G++VAILHPGWVRT MTG++GLVD ES AG+ ARIEEL L NSGTFW G+++PW Sbjct: 33 RKSSPDLDSL----KLRTVCGVDVSSDEAVQMLDAEL---GDTQLDLLINNAGILRRESLEELDMDSMLEQFKVNSLGPLRV-TATLRHRMSA--GAKVAIISSRMGSIADNSSGSRYGYRMSKAAVNIAGVSLARDLKPQGIAVAILHPGWVRTDMTGNTGLVDAKESAAGLIARIEELTLENSGTFWHMNGEILPW 220
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: A0A2E9QWS4_9DELT (Short-chain dehydrogenase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9QWS4_9DELT) HSP 1 Score: 187 bits (475), Expect = 1.230e-56 Identity = 100/193 (51.81%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 28 AASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 ++S D + VV GVDV++ A +L G+ ++DILINNAG++KR+ +D D + + EVN+ G LR++ LL + G K+ L+TS+MGS+ADNTSG YGYRMSKAALN AGVSLAHDLK +SVAILHPG+VRT MTG G++D +S AG+ RI+EL+L NSGTFW G+V+PW Sbjct: 34 SSSEALDALGVRVVTGVDVSDQASLDTFAASL---GDEKIDILINNAGILKRETLEEMDYDTIFKQFEVNSVGPLRVTHTLLPH---LSEGAKVALVTSRMGSIADNTSGSRYGYRMSKAALNMAGVSLAHDLKDRSISVAILHPGFVRTDMTGRQGMIDADQSAAGLIQRIDELNLDNSGTFWHTNGEVLPW 220
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: UPI001CBCA980 (SDR family oxidoreductase n=1 Tax=Pseudomonas nanhaiensis TaxID=2830842 RepID=UPI001CBCA980) HSP 1 Score: 182 bits (462), Expect = 1.140e-54 Identity = 100/192 (52.08%), Postives = 132/192 (68.75%), Query Frame = 1 Query: 31 ASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 +S+ D V+ VDVT D LV AL+ +D+LINNAG+++ +R T+D D +R+ MEVNAY LR++ ALL L G K+ ITS+MGSMADN SGG YGYR SKAALNA G SLA DLKG G++VA+LHPG+V+TRMTG++G + ES AG+ ARI+ L L N+G+FW G+++PW Sbjct: 35 SSAALDQIAARVISSVDVTRDEDVRKLVEALD---GESIDLLINNAGLLRDERLGTIDFDSIRQQMEVNAYAPLRVTEALLP---LLGQGAKVANITSRMGSMADNDSGGRYGYRASKAALNAFGKSLAMDLKGRGIAVALLHPGYVQTRMTGNTGQMTPEESAAGIAARIDALTLDNTGSFWHSNGELLPW 220
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: UPI001688FB54 (SDR family oxidoreductase n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001688FB54) HSP 1 Score: 181 bits (460), Expect = 2.350e-54 Identity = 99/184 (53.80%), Postives = 129/184 (70.11%), Query Frame = 1 Query: 58 IHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKR-DRNTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTG-DSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 + V GVD+T+DA L ++ GN +D+LINNAG+++R LD D +R+ EVNA GALR++ LL R G K++LITS+MGS+ADNTSGG+YGYRMSK AL+ AG SLAHDLK G++VA+LHPG V+TRMT SG + SV G+ ARI++L L NSGTFW G+V+PW Sbjct: 44 VQVETGVDITDDASVASLS---DRLGNQSIDVLINNAGILQRVTLEDLDFDSIRQQFEVNALGALRVTHTLLPR---LKAGSKVVLITSRMGSIADNTSGGSYGYRMSKVALSMAGKSLAHDLKSRGIAVAVLHPGLVQTRMTNFTSGGISAETSVKGLLARIDQLTLDNSGTFWHSNGEVLPW 221
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: A0A523MPW3_9GAMM (SDR family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MPW3_9GAMM) HSP 1 Score: 181 bits (459), Expect = 3.230e-54 Identity = 99/193 (51.30%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 31 ASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNP-RVDILINNAGVMK-RDRNTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 A P I + G D+T+ G + A + P +D+LINNAG++ + LDI+ +R+ EVNA G LR++ +LL G KI+L+TS+MGS+ADN SGG+YGYRMSKAALNAAG+SLA DL+G G++VAILHPG+VRT MTG SGL+D ESVAG+ RI+ L+L+NSG+FW G+++PW Sbjct: 35 AGDALVSPGIDIHAGYDITD----GVAIEAFARTVEPGTIDLLINNAGILHGMSLDDLDIESVRQQFEVNALGPLRVTRSLLHA---LKDGAKIVLLTSRMGSIADNDSGGSYGYRMSKAALNAAGMSLARDLRGRGIAVAILHPGYVRTDMTGQSGLLDVDESVAGLLERIDGLNLANSGSFWHSNGELLPW 220
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: A0A2D6IUG9_9GAMM (Short-chain dehydrogenase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6IUG9_9GAMM) HSP 1 Score: 180 bits (457), Expect = 6.480e-54 Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 58 IHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 I + + DVT+ A ++E VD+LINNAG+++ + LD+ R+ E+NA G LR++ +LL GGKI L+TS+MGS+ADN SGG+YGYRMSKAALNAAG+SLA DL G++VAILHPG+VRT MTG SGL+DT ESV GM RI+EL+LSNSG+FW G+++PW Sbjct: 44 IEIQENYDVTDGAAIEAFARSVEPG---TVDLLINNAGILRSTSLDNLDLASARQQFEINALGPLRVTQSLLPA---LKDGGKIALVTSRMGSIADNDSGGSYGYRMSKAALNAAGMSLARDLHERGIAVAILHPGYVRTDMTGQSGLIDTDESVDGMLERIDELNLSNSGSFWHTNGELLPW 220
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: A0A1G5SCK4_9PROT (Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Nitrosomonas mobilis TaxID=51642 RepID=A0A1G5SCK4_9PROT) HSP 1 Score: 179 bits (454), Expect = 2.020e-53 Identity = 99/192 (51.56%), Postives = 134/192 (69.79%), Query Frame = 1 Query: 31 ASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 AS+ D VV+GVDVT DAG ++ AL N RVD+LINNAG+++ ++ ++D+D +R+ ME+NAY LR++ AL++ GGKI ITS+MGS+ADN SGG YGYR SKAALNA SLA DLK G++VA+LHPG+V+TRM GL+ ES G+ ARIEEL+L N+G+FW G+++ W Sbjct: 38 ASAELKDVAAKVVEGVDVTQDAGLQAMIAALA---NQRVDLLINNAGLLQDEQLGSIDLDSIRKQMEINAYAPLRVAEALIAN---IPSGGKIANITSRMGSIADNDSGGRYGYRASKAALNAFAKSLAIDLKLKGIAVALLHPGFVKTRMVNFGGLITPEESAKGLAARIEELNLENTGSFWHQNGELLSW 223
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: UPI001C4BA2BF (SDR family oxidoreductase n=3 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001C4BA2BF) HSP 1 Score: 179 bits (453), Expect = 2.860e-53 Identity = 103/192 (53.65%), Postives = 131/192 (68.23%), Query Frame = 1 Query: 31 ASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKRDR-NTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDSGLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 AS+ + V+DGVDVT DAG L ALE G P +D+LINNAG+++ ++ ++D D +R MEVNAY LR++ AL+S GGKI ITS+MGS+ADN SGG YGYR SKAALNA G SLA DLK G++VA LHPG+V+TRM GL+ ES G+ ARIE L+L N+G+FW GD +PW Sbjct: 38 ASAELAEIATRVIDGVDVTTDAGIQTLTSALE--GQP-IDLLINNAGLLQDEKLGSIDFDSIRMQMEVNAYAPLRVAEALVSHM---PSGGKIANITSRMGSIADNDSGGRYGYRASKAALNAFGKSLAMDLKQKGIAVAQLHPGYVQTRMVNFGGLITPEESAKGLAARIEGLNLENTGSFWHSNGDELPW 223
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Match: UPI000B59A8B2 (SDR family oxidoreductase n=1 Tax=Leptolyngbya ohadii TaxID=1962290 RepID=UPI000B59A8B2) HSP 1 Score: 178 bits (452), Expect = 3.810e-53 Identity = 101/193 (52.33%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 31 ASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDILINNAGVMKR-DRNTLDIDVLRESMEVNAYGALRISTALLSRKLLAAPGGKIILITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGDGMSVAILHPGWVRTRMTGDS-GLVDTSESVAGMTARIEELHLSNSGTFWGFKGDVIPW 603 AS I + +G+D+T+DA L + L GN +D+LINNAG++KR LDID +RE EVNA GALR++ ALL G KI+L+TS+MGS+ DNTSG +YGYRMSK AL+ AG SL+HDLK G++VAILHPG V+TRMT + G + ESV G+ ARI+EL L N+GTFW G+++PW Sbjct: 35 ASQELQQLGIQLEEGIDITSDASVANLRNRL---GNQTIDVLINNAGILKRVTLEELDIDCIREQFEVNALGALRVTHALLPN---LKAGSKIVLMTSRMGSIGDNTSGSSYGYRMSKVALSMAGKSLSHDLKPRGIAVAILHPGLVQTRMTNFTRGGITPEESVQGLLARIDELTLENTGTFWHANGEMLPW 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6632.15356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6632.15356.1 >prot_L-elsbetiae_contig6632.15356.1 ID=prot_L-elsbetiae_contig6632.15356.1|Name=mRNA_L-elsbetiae_contig6632.15356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp FIYRRKNTPAASSLFDDPNIHVVDGVDVTNDAGAGCLVHALEKAGNPRVDback to top mRNA from alignment at L-elsbetiae_contig6632:6464..7958+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6632.15356.1 ID=mRNA_L-elsbetiae_contig6632.15356.1|Name=mRNA_L-elsbetiae_contig6632.15356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1495bp|location=Sequence derived from alignment at L-elsbetiae_contig6632:6464..7958+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6632:6464..7958+ >mRNA_L-elsbetiae_contig6632.15356.1 ID=mRNA_L-elsbetiae_contig6632.15356.1|Name=mRNA_L-elsbetiae_contig6632.15356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig6632:6464..7958+ (Laminarionema elsbetiae ELsaHSoW15)back to top |