mRNA_L-elsbetiae_contig660.15321.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 495 bits (1275), Expect = 7.280e-156 Identity = 243/262 (92.75%), Postives = 249/262 (95.04%), Query Frame = 1 Query: 157 GAPGADPITSPGLEGVFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPLD 942 GA G DPITSPGLEGVF DSG MHGLRVRGSSYLRDRRKI AGPSFGTL+RADLFRVDG +HHLFRVDHICAHGRMKDRVAF QSG NPPFLFIVNIQMPGDRAHSVVLCWGMRLKEA EA+ AGRLS ED FLRLF+RYI+LDLEGGLP+NDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPLD Sbjct: 1600 GAQGGDPITSPGLEGVFIDSGHMHGLRVRGSSYLRDRRKISAGPSFGTLVRADLFRVDGAKHHLFRVDHICAHGRMKDRVAFFQSGPNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAMEADKAGRLSPEDSNFLRLFTRYISLDLEGGLPLNDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPLD 1861
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A6H5JGP3_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP3_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.570e-55 Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 1 Query: 574 RYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSAR 903 RYI+LDLEGGLP+NDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQ S E + R Sbjct: 11 RYISLDLEGGLPLNDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQVRSSAPTRETAVWMER 120
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.310e-42 Identity = 103/268 (38.43%), Postives = 151/268 (56.34%), Query Frame = 1 Query: 181 TSPGLEGVFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGD--NPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRY---IALDLE---------GGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPL 939 ++P + ++D T H L VRG+ YL D+ K+ P+ L+ +RVD +R R+DHI + GR K + S D PPFL+IVNIQ+PG S+V+ + + A++ +A + KFL LF +Y I + E G P+ +RN+R KL P + EGP++V++AVG KP ++G+KLT RYFR Y E D+ VGSS +A+ L GY K L +++ L+G SE ELPE+LIG R + D+ E L Sbjct: 219 SNPSIIDDWSDGCTDHSLSVRGAFYLEDKAKV-KSPATCRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQRPPFLYIVNIQLPGKPPLSMVMYFLLPTDLAQQDPSA-----DTQKFLDLFQKYYEDIPITTEPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIEAGEDL 480
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: C1MLL2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLL2_MICPC) HSP 1 Score: 162 bits (410), Expect = 3.950e-41 Identity = 96/236 (40.68%), Postives = 134/236 (56.78%), Query Frame = 1 Query: 232 LRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEP 936 RVRGS+YL DR+K+ AG F L+ D F VD R +D+IC+ + + L++ F+F VNIQ+PG R S+V + +R K + LFSR++ D + RN RLKL P V GPWVV++AVG KP ++G+ L Y RP Y EVDID+GSST+A+N GY + LV+D+ F ++G+S+ ELPERLIG++RI + A P Sbjct: 228 FRVRGSNYLHDRKKVPAGQPFAELVAVDWF-VDYRR-----IDNICSRPSGTCQHSLLKNDYQESFVFAVNIQVPGPRHFSIVYYYRLRAPLDKSS---------------LFSRFVHGD-------DAFRNSRLKLIPSVALGPWVVQRAVGTKPLIVGRALKVVYHSRPNYLEVDIDIGSSTVANNVVRFVLGYVRTLVVDMCFLIEGKSDGELPERLIGTSRIAHLEPDAAVP 435
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.460e-40 Identity = 95/274 (34.67%), Postives = 150/274 (54.74%), Query Frame = 1 Query: 172 DPITSPGLEGVFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDG-KFLRLFSRYIALDL---------------EGGL-PVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPL 939 D P LEG + DS H VRG Y+ D+ K+ AG + L+ L+R + +R + R+DH+ A G+ + V L+ + PFLFI+NIQ+PG S+V+ + M A+ R D KF + Y DL E GL P + RN+R KL P++++GP++VR AVG KP ++G+KLT RY+R Y E D+ VGS+ +A++ T ++ Y+K++ +++A ++G E ELPE+L+G + D+ E + Sbjct: 116 DRFRQPQLEGTWQDSSNTHDFHVRGPFYMSDKLKVHAGTAVCPLVLYQLYRNEPSRLN-DRIDHVAAKGKCRRIVEALRELNPAPFLFILNIQVPGHPPMSMVMIFAM------PADYDRRDCSSDAVKFRNMLQTYYQ-DLPVHDPSNPQSPTEEGEAGLSPSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDVHVGSNAVANHITGISRTYSKSVTVEIAITIEGRQEAELPEKLVGVVKFTHTDIEVGEDI 381
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A7S0GW50_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GW50_MICPS) HSP 1 Score: 152 bits (385), Expect = 8.260e-37 Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1 Query: 232 LRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAH--GRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARI--VRPDLGRAEP 936 RVR +YLRDR+K AG F L+ D F VD R VD++C+ G + ++ D F+F +NIQ+PG R HS+V + L E + E+ +F R++ D E R+ RLKL P V GPWVV++AVG KP ++GK L RY RP + EVDID+GSS +A+N GY + LV+D+ F ++G+++ ELPERLIG++R+ + PD A P Sbjct: 349 FRVRDVNYLRDRKKRLAGKPFADLVAVDWF-VDYRR-----VDNVCSRPTGTCQKKILSGPQADGR-FVFCINIQVPGARHHSIV--YYFVLNEPLDRES-------------VFGRFVGGDQE-------YRDARLKLIPHVALGPWVVQRAVGTKPLIVGKALKVRYHSRPNFLEVDIDIGSSAVANNVVRFVLGYVRTLVVDMCFLVEGKTDKELPERLIGTSRVAHLEPDTAVAPP 559
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A067BR04_SAPPC (EDR2_C domain-containing protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BR04_SAPPC) HSP 1 Score: 147 bits (371), Expect = 1.120e-36 Identity = 96/253 (37.94%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 187 PGLEGVFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFR----VDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRA 930 P + +F++ + L VRG SY D +K+ AG GTL+ DL++ + G + H+ +D R +A GD +FIVN+Q+PG VV W + AEA D KF LF+R+ + + E ++ R KL P +++GPW+++ AV KP + G KLT RYF Y EVD+D+GSS +ASN L GYA+ LV+DL+ LQG S+ ELPER+ GS R DL A Sbjct: 84 PSMLDLFSEPSSSETL-VRGLSYATDGKKVPAGDCLGTLLHVDLWKATDDMPGRQDHVAELDLR----RPSSLLATANPGDT---IFIVNLQVPGTPFVHVVSYWRL------SAEALA----SDAKFAGLFTRFRSNEPEA----QSFQDARFKLVPTIVDGPWLIKAAVPQKPAITGTKLTQRYFVGSNYVEVDMDIGSSAIASNIVSLCRGYAERLVVDLSLTLQGNSDVELPERIFGSVRFSHLDLTLA 314
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.430e-36 Identity = 95/258 (36.82%), Postives = 136/258 (52.71%), Query Frame = 1 Query: 202 VFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQS----GDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLE-----------GGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESED-ELPERLIGSARIVRPDLG 924 + D G + RVRG YL DR K AGP G L+ A +FR+ R DHI + GRM + + +Q F F++N Q+PGD S+V + + R EDG F LF R++ ++ G ++D +N+R KL P +++GP +++ AVG KP ++G+KLT RYFR Y EVD+D+ SS LAS L GYAK L +++ LQGE E ELPE+L+G+ I D+ Sbjct: 565 AYYDPGRGNSFRVRGRRYLHDRLKTPAGPPVGELVIAYVFRISPENPGQ-REDHIASRGRMAEILREMQDMKGRDGKHTFFFLLNFQVPGDPPLSMVTVFAL---------PRDRRPAEDGCFWTLFDRFVDFPMDDIKGEGKSDRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDIN 812
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A835Z1B8_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B8_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.340e-36 Identity = 101/287 (35.19%), Postives = 150/287 (52.26%), Query Frame = 1 Query: 178 ITSPGLEGVFTDSGTMHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALD------------LEGGLPVNDIRNRRLKLFPKVLEGPWVVRKA---VGKP-------------CVIGKKLTARYFRRPG-----YFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEPL 939 + S L G F+D HG ++RG +Y+ D+ K AG G L+ DLFR+ + R+D+I + G K +A + LF+++ Q+PG A S+V WG+ L A+G D KF LF+++ L G +P +D R +R KL P + +GPW+VRK +G P ++ +KLT R+F+ Y E+DID+GSST+A N LA G+AK LV+D+ +QG++E ELPERLIG+ R+ D+ EPL Sbjct: 1536 LESDALRGTFSDLRANHGFKLRGLTYMDDQIKQPAGEPVGRLLMCDLFRLPDD---CGRLDNIASAGMCKKNIARISRPGEA--LFVLSYQVPGSPALSLVCVWGVPL-------ASG-----DAKFDALFAKFRDLPSAAAAGEGXXXXXXGRVPGDDFRTQRFKLLPSIKDGPWIVRKVCGYMGAPDLWLGDIVVGSGATLLAQKLTCRHFQGTTAAGMPYSELDIDIGSSTVAYNTVSLAIGHAKALVVDMGICIQGDNESELPERLIGTVRLTNLDMSSCEPL 1805
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Match: A0A7R9TR21_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TR21_MICPS) HSP 1 Score: 147 bits (372), Expect = 3.180e-36 Identity = 96/264 (36.36%), Postives = 135/264 (51.14%), Query Frame = 1 Query: 232 LRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAHGRMKDRVAFLQSGDNPPFLFIVNIQMPGDRAHSVVLCWGMRLKEAKEAEAAGRLSKEDGKFLRLFSRYIALDLEGGLPVNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYA----------------------------KNLVLDLAFALQGESEDELPERLIGSARIVRPDLGRAEP 936 RVRGS+YL DR+K+ AG F L+ D F VD R +D+IC+ + + L++ + F+F VNIQ+PG R S+V + +R K + LFSR++ D + RN RLKL P V GPWVV++AVG KP ++G+ L Y RP Y EVDID+GSST+A+N GY + LV+D+ F ++G+S+ ELPERLIG++RI + A P Sbjct: 145 FRVRGSNYLHDRKKVPAGQPFAELVAVDWF-VDYQR-----IDNICSRPSGTCQHSLLKNDYHESFVFAVNIQVPGPRHFSIVYYYRLRAPLDKSS---------------LFSRFVHGD-------DAFRNSRLKLIPSVALGPWVVQRAVGTKPLIVGRALKVVYHSRPNYLEVDIDIGSSTVANNVVRFVLGYCFPTIFISQKKTTSNLSYILICAFLNRYVRTLVVDMCFLIEGKSDGELPERLIGTSRIAHLEPDAAVP 380 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig660.15321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig660.15321.1 >prot_L-elsbetiae_contig660.15321.1 ID=prot_L-elsbetiae_contig660.15321.1|Name=mRNA_L-elsbetiae_contig660.15321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MHGLRVRGSSYLRDRRKIFAGPSFGTLIRADLFRVDGNRHHLFRVDHICAback to top mRNA from alignment at L-elsbetiae_contig660:25706..30657- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig660.15321.1 ID=mRNA_L-elsbetiae_contig660.15321.1|Name=mRNA_L-elsbetiae_contig660.15321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4952bp|location=Sequence derived from alignment at L-elsbetiae_contig660:25706..30657- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig660:25706..30657- >mRNA_L-elsbetiae_contig660.15321.1 ID=mRNA_L-elsbetiae_contig660.15321.1|Name=mRNA_L-elsbetiae_contig660.15321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig660:25706..30657- (Laminarionema elsbetiae ELsaHSoW15)back to top |