mRNA_L-elsbetiae_contig660.15322.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 238 bits (608), Expect = 2.540e-70 Identity = 114/127 (89.76%), Postives = 123/127 (96.85%), Query Frame = 2 Query: 8 DAGGGGRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLADNLGASEDPE 388 DAGGGGRLPGDDLRN+RFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAK L VDMGFC+QGE ++E PEV+LGVVR++K+DVLLADNLGA+EDPE Sbjct: 1389 DAGGGGRLPGDDLRNMRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKSLCVDMGFCIQGETDDEFPEVLLGVVRLKKMDVLLADNLGANEDPE 1515
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A6H5JHL0_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL0_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.380e-56 Identity = 93/110 (84.55%), Postives = 96/110 (87.27%), Query Frame = 2 Query: 8 DAGGGGRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQG-----EAENELPEVMLG 322 DAGGGGRLPGDDLRN+RFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAK L VDMGFC+Q E E P +LG Sbjct: 115 DAGGGGRLPGDDLRNMRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKSLCVDMGFCIQVSRKKIEMGKEYPPGILG 224
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A835Z1B8_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B8_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.690e-40 Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 20 GGRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRS----YFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLA 358 GGRLP D RN RFKL P+ILEGPW+V+K VG+ PTLI K+TCRYF + YFEVDIDIGSS VA+ T S+A G+AKGL VDMGFC+QGE E+ELPE+++G + + LD+ LA Sbjct: 1329 GGRLPPHDFRNQRFKLLPSILEGPWLVKKTVGNTPTLIGHKVTCRYFGGNTGGTQYFEVDIDIGSSQVAFKTASMAAGFAKGLTVDMGFCLQGEDESELPELLIGCLCISHLDMSLA 1445
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A7S3XTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTA9_HETAK) HSP 1 Score: 135 bits (339), Expect = 6.290e-38 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 23 GRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLADNLGASEDPEVNGGGG 406 GRLP D +NLRFKL P+I+EGPWI ++AV +KP ++ QK+T RYFRT Y EVD+DIGSSVVA V L GYA LVVD+G ++G+ ELPEV+L R+ ++D+ LA L P+ GGG Sbjct: 33 GRLPADAFQNLRFKLVPSIVEGPWICQRAVKNKPAILGQKITQRYFRTEHYLEVDLDIGSSVVADKIVGLCRGYAVNLVVDIGITLEGQTGAELPEVLLAATRMARVDLALAAPL---RPPDEGEGGG 157
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.780e-33 Identity = 59/115 (51.30%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 23 GRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLADNL 367 G LP DD RN RFKL P+++ GP+IVRKAVG+KP L+ +K++ RYFR Y E D+D+GSS++A VSL GYAK L V++G C++G + ELPE ++GV+R+ +D+ +A+ L Sbjct: 516 GLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDIDMAEPL 630
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.720e-31 Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 2 Query: 38 DDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDV 349 DD RN RFKL P+I+EGP++VR AVG+KP L+ +KLT RY+R Y E D+D+ SS VA + VS+ G + GL VD+G ++G A ELPE LGVVR+ +LD+ Sbjct: 1 DDFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDVDVASSSVAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLNRLDL 104
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A6H5JGP3_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP3_9PHAE) HSP 1 Score: 116 bits (290), Expect = 6.030e-31 Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 23 GRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRK 340 G LP +D+RN R KLFP +LEGPW+VRKAVG KP +I +KLT RYFR YFEVDID+GSS +A N LA GYAK LV+D+ F +Q + E + + R R+ Sbjct: 19 GGLPLNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQVRSSAPTRETAVWMERARE 123
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: E1ZD95_CHLVA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD95_CHLVA) HSP 1 Score: 114 bits (284), Expect = 3.070e-30 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 38 DDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLA 358 D RN +FKL P I+ G WIV+++VG+ P L+ QKLT RYFR +YFEVD+DI S+ VA + SL +G LVVD+ V+G+AE+ELPE ++G VR LD+ A Sbjct: 1 DAARNKKFKLIPRIVRGSWIVKQSVGTTPVLLGQKLTTRYFRGPNYFEVDVDITSNTVANSVTSLVVGAITSLVVDLAPLVEGQAEDELPERLIGSVRFEHLDLKTA 107
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: W9QRB0_9ROSA (EDR2_C domain-containing protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9QRB0_9ROSA) HSP 1 Score: 115 bits (288), Expect = 4.500e-30 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 35 GDDL-RNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLD 346 GDD RN RFKL P I +G WIV+++VG K L+ Q L YFR ++Y E++ID+GSS VA VSL +GY LV++M F +QG E ELPEV+LG R+ LD Sbjct: 56 GDDAYRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEVHYFRGKNYLELEIDVGSSTVARGVVSLVLGYLNNLVIEMAFLIQGNTEEELPEVLLGTCRLNHLD 160
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.700e-30 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 2 Query: 2 TEDAGGGGRLPGDDLRNLRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKGLVVDMGFCVQGEAENELPEVMLGVVRVRKLDVLLADNL 367 T DAG P + LRN RFKL PAI EGP++V++AVG+KP L+ QKLT RYFR Y E D+ +GSS +A V L GY K L V++G ++G +E ELPE ++GV R +K+D+ ++L Sbjct: 362 TPDAG---VYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIEAGEDL 480 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig660.15322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig660.15322.1 >prot_L-elsbetiae_contig660.15322.1 ID=prot_L-elsbetiae_contig660.15322.1|Name=mRNA_L-elsbetiae_contig660.15322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp DGGRRRGRALARRRPPQPEIQAVPRDSGGPVDRAEGGREQADAHCAEADVback to top mRNA from alignment at L-elsbetiae_contig660:31245..34074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig660.15322.1 ID=mRNA_L-elsbetiae_contig660.15322.1|Name=mRNA_L-elsbetiae_contig660.15322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2830bp|location=Sequence derived from alignment at L-elsbetiae_contig660:31245..34074- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig660:31245..34074- >mRNA_L-elsbetiae_contig660.15322.1 ID=mRNA_L-elsbetiae_contig660.15322.1|Name=mRNA_L-elsbetiae_contig660.15322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig660:31245..34074- (Laminarionema elsbetiae ELsaHSoW15)back to top |