mRNA_L-elsbetiae_contig66.15312.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig66.15312.1
Unique NamemRNA_L-elsbetiae_contig66.15312.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A6H5KTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 6.200e-149
Identity = 221/263 (84.03%), Postives = 235/263 (89.35%), Query Frame = 3 
Query:  276 MVEGGKENKA-----KRATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERRSPHTVTESLCPQTLGVARAAL--QLLPRVWVG 1043
            MVEG KE+KA     +RATLVLV+KYPTPGSSKTRLIPA G  LAAQLAMAMLQDLL RFSIEDP GEFRKVFVYAPPSAGP+VNKML+DLGLDK WDAEPVS+GT LRESGLTTILEAALASARS ERDGAVIFVGMDTPELPWSEV+AA+SSAEK+GKAYICPASDGGYTLLGLPP A RGTFEGVKWSD+LTCKSQ LALAS G+ TR GGTYHDVDEADDVAGLE+RSP  +  S CPQTLG+AR AL  QLLPRVWVG
Sbjct:    1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKAWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPASDGGYTLLGLPPKAGRGTFEGVKWSDSLTCKSQTLALASRGVSTRTGGTYHDVDEADDVAGLEKRSPRGLEGSPCPQTLGIARTALRRQLLPRVWVG 263
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: D8LGD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD1_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 7.320e-90
Identity = 143/165 (86.67%), Postives = 152/165 (92.12%), Query Frame = 3 
Query:  276 MVEGGKENKA-----KRATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICP 755
            MVEG KE+KA     +RATLVLV+KYPTPGSSKTRLIPA G  LAAQLAMAMLQDLL RFSIEDP GEFRKVFVYAPPSAGP+VNKML+DLGLDKTWDAEPVS+GT LRESGLTTILEAALASARS ERDGAVIFVGMDTPELPWSEV+AA+SSAEK+GKAYICP
Sbjct:    1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLQRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 165
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A835Z1N4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N4_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.320e-55
Identity = 109/236 (46.19%), Postives = 137/236 (58.05%), Query Frame = 3 
Query:  315 TLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERRSPHTVTES-LCPQTLGVARAALQ 1019
            +LVL+AK P  G SKTRLI  FG     QLA AML DLL RF         R+V VYAPP A     K++R+ G++  W   PV+ GT L+++ LT IL+ AL   R     G V+FVGMDTP LP  E++ A      E  A +CPA+DGGYTLLG+P  A    F+GV WS   TC++QV  L   GI   IG TY D+D A+DV    R +  T   + +CP TL  A AAL+
Sbjct:    5 SLVLIAKCPRMGISKTRLIACFGEEATFQLARAMLLDLLRRFGSSAELRSLRRVLVYAPPEARDEAAKLVREAGVEHEWVLTPVAGGTKLKDADLTAILKDALEGTREEGTTGTVVFVGMDTPHLPSFEIIEACRKGA-EDVALVCPANDGGYTLLGVPRNAPAKIFDGVLWSSPKTCETQVTRLRECGISVMIGATYEDLDTAEDVHSWHRTATATSAAAHICPLTLEAAAAALR 239
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A7S2CAW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAW3_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.010e-41
Identity = 100/263 (38.02%), Postives = 134/263 (50.95%), Query Frame = 3 
Query:  309 RATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDK-TWDAEPVSAGTALRESGLTTILEAALASARSSERD--------------GAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERRS--------PHTVTESLCPQTLGVARAALQLLP 1028
            R  ++LVAK+PT G SKTRL+PA G      +A A++ D L             KV ++AP S+     ++L+DLGLD  TW   P+  G  LR S L   L   L  AR+                  GA +F+GMD PE+   ++  A ++A   G AYICPA+DGGYTLL LPP A    F GV+WS   TC SQ+  +AS GI   +G TY D+D+  D+ GL +R         P  + ES    T  +  A   +LP
Sbjct:   52 RDVIILVAKFPTRGKSKTRLMPALGEDGTLAIARALVSDALYSVGTAPELKAATKVLLFAPESSRSDFQRLLQDLGLDAATWVLIPIQQGDDLRSSDLGGKLAFGLKDARAVPSASFGGDGKMVAGLSRGAALFIGMDAPEVSPLQIAQALATARSRGSAYICPATDGGYTLLALPPGAPDTVFSGVRWSADDTCLSQMSQIASKGIPVLVGPTYDDIDDIHDLRGLSQRLRRQQLSCVPGELNESAPASTSRIFSALATVLP 314
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: K0S136_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC)

HSP 1 Score: 149 bits (375), Expect = 1.910e-38
Identity = 93/235 (39.57%), Postives = 127/235 (54.04%), Query Frame = 3 
Query:  306 KRATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAP--PSAGPAVNKMLRDLGLDK--------------TWDAEPV-SAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEG--KAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERR 953
            +  T+V+ AK P PGSSKTRL P  G   AA LA AML D+LS  +  D   +  K+ VYAP   + G  + K+L  LGL                 W   P+ S  + L  S L   L  +L  AR  +    V+F+GMD+PE+P  E++    +A  +   +AY+CPA+DGGY LL LP  A    F G++WS ALT  SQ+ AL+  GI   IG   +D+DE +DV+ L +R
Sbjct:    3 RNGTIVVFAKCPLPGSSKTRLAPLLGDDGAALLAQAMLSDVLSSLTACDHLQDTLKLLVYAPGDSNTGSRMTKILASLGLSSCSSESYTPRKDTTSNWVLMPMLSDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCPANDGGYGLLALPSCAPTSVFSGIRWSCALTAVSQLKALSDSGIDVSIGRLMYDIDEPEDVSSLAKR 237
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A7S3P7T7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7T7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.210e-37
Identity = 89/228 (39.04%), Postives = 127/228 (55.70%), Query Frame = 3 
Query:  294 ENKAKRATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRF-SIEDPT--GEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERD----GAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAA-ERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERR 953
            E +    T+VLVAK P PG SKTRLIP  G   +A LA AML D+L+   S+++     + + + ++AP      +  +L +LG+   W   P+  G  L+ S L T L  AL  A+  ++     G VIF+GMD+PE P  E+ A  ++      A +CPA DGGY +L +PP+      F GV+WS +LT  SQ+ AL+  GI  RIG   +D+DE +DV  L  R
Sbjct:   10 EREMVDGTIVLVAKCPIPGKSKTRLIPLLGENGSAALASAMLSDILTNLTSLKESVMASKIQLILLFAPAQGRSFMETLLDNLGVSSDWILLPMITGD-LKSSDLGTKLTDALVRAKLEQQSAGLQGPVIFLGMDSPETPLDEIEAVFTNESSLSSALLCPAEDGGYGMLSVPPSVVPEKVFAGVRWSQSLTAVSQLKALSDAGIFARIGRLMYDIDEPEDVLALASR 236
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A6S9DJ27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DJ27_HETAK)

HSP 1 Score: 136 bits (342), Expect = 6.780e-34
Identity = 82/211 (38.86%), Postives = 113/211 (53.55%), Query Frame = 3 
Query:  315 TLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAE-RGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGL 944
            TL+ V K+P+ G+SKTRLIP  G   A  LA AM++DL+ +FS  +      KV  +AP  A       L+   + + W   P+     L+   L   L  A  +       GA  FVGMDTP+LP + V  A +   + G+A++CPA+DGGY LLGLP  A     F GV+WS   TC+ QV A+ +  I    G  Y DVD+A+D+  L
Sbjct:    4 TLIFVTKWPSIGASKTRLIPDLGEEGAFLLAKAMVEDLIIKFSSSESLQNINKVLYFAPEEAKEDACSFLQQNDITEQWVLLPMIQSNELQSPDLGDKLVHAHNTCTQWFGPGATAFVGMDTPQLPAAAVARALTEG-RGGRAFVCPATDGGYVLLGLPAGAPAEACFRGVRWSADTTCEDQVRAINAASIEVVTGDIYTDVDDAEDMEAL 213
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: R1D0W7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D0W7_EMIHU)

HSP 1 Score: 130 bits (327), Expect = 1.990e-31
Identity = 97/262 (37.02%), Postives = 131/262 (50.00%), Query Frame = 3 
Query:  306 KRAT-LVLVAKYPTPGSSKTRLIPAFGTVLA---------AQLAMAMLQDLLSRFSIEDPT--GEFRKVFVYAPPS--AGPAVNKMLRDLGLDKTWDAEPVSAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAA-ERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGL-ERRSPHTVTESLCPQTLGVARAALQLLPRVWVG 1043
            +RAT LVL+AKYP  G SKTRL        A         A    A   DLL RF+    +  G F     YAPP+  A      +L++  ++  W  +PV + ++   S L  IL  A   AR++     V F+G+D P+LP   ++AA S++   G A +CPASDGGYTLL LP  A ER  F  V+WS   TC SQ+ AL   G+ + +  T+ DVDE  D+  L  R +    + S CP T  +  A     P V  G
Sbjct:   33 QRATALVLLAKYPGAGKSKTRLAAQLRPFCASDDAVQAIIANFVRAATLDLLQRFAAATASQGGGFECFLTYAPPTEEARSWFASLLQEGRVEDRWRLQPVLSSSSAASSSLGDILCDAGQRARAARGCARVSFLGVDCPDLPLEALLAAASASSAPGVAAVCPASDGGYTLLALPEGADERLCFSDVRWSAGDTCLSQLQALTRAGLTSAVLETHSDVDELPDLRALWARLAGEPDSTSQCPHTRAMLAALATSAPAVLCG 294
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A8J6CB20_DIALT (Vesicle-fusing ATPase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB20_DIALT)

HSP 1 Score: 134 bits (338), Expect = 9.770e-31
Identity = 100/276 (36.23%), Postives = 135/276 (48.91%), Query Frame = 3 
Query:  300 KAKRATLVLVAKYPTPGSSKTRLIPA-FGTVLAAQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPSAGPAVN--KMLRDLGL-DKTWDAEPVSAGTALRESGLTTILEAALASARSSERD-GAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERRSPHTVTESLCPQTLGVARAALQLLPRVWVG*KARLGYAEGLVARERAGEEDCP 1112
            +A    LVLVAKYPTPG+SKTRL  +  G    A++A AML D+L+R +   P    ++V +++PP    A    ++LR+ G  +  W   P+ + T  R S LT +L  AL   R+        IF+G D P +    V AA   A  +G+A++CPA DGGYTLLG+P  A    F GV+WS A T  SQ   LA  G+   IG T+ DVD+A     L  +             L        L  RVW    A + +     A   AG  D P
Sbjct:   33 RASTPVLVLVAKYPTPGASKTRLAASGLGDARTAEVARAMLLDVLARHARAGP--RVQRVLLFSPPDGAHADKFARLLREAGCAEGDWTLVPMRS-TDARSSNLTAVLMDALTRVRARFAPVSTTIFIGADAPTVGEDAVRAA-IVAGLDGRAHLCPAEDGGYTLLGVPADAPASIFAGVRWSAATTAISQAARLAEAGVRVDIGATFVDVDDAASFEDLREK-------------LAADDGQRALCSRVW----ALIEHGVAAHAEPNAGAADAP 287
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BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Match: A0A7S3X3J9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X3J9_9SPIT)

HSP 1 Score: 126 bits (317), Expect = 2.780e-30
Identity = 95/237 (40.08%), Postives = 122/237 (51.48%), Query Frame = 3 
Query:  303 AKRATLVLVAKYPTPGSSKTRL----IPAFGTVLA----AQLAMAMLQDLLSRFSIEDPTGEFRKVFVYAPPS--AGPAVNKMLRDLGLDKTWDAEPV-SAGTALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSAEKEGKAYICPASDGGYTLLGLPPAAERGT-FEGVKWSDALTCKSQVLALASMGIHTRIGGTYHDVDEADDVAGLERRSPHTVTES 977
            A   TLVL+AK P P  SKTRL    +P  G   A       A++ L DLL RFS++      R+V +YAPP+  +   ++ +L  LG+ K W   PV         S L  IL  A     S+     +IF+GMD+P LP  E+  A         AYICPA DGGY LLGLP  A+    F  V WS + TC+SQV ALA  G    IG TY DVDEA+D+  + ++      ES
Sbjct:   13 APMTTLVLLAKRPGP-KSKTRLAVSLVPLLGPKAAQDFTTDFALSSLSDLLQRFSMDCD----RRVLLYAPPTDVSREHLSSLLDALGVAKAWTLLPVLETPEGSSSSDLGAILMDAAKRCPSASAPN-LIFIGMDSPTLPSKELTKAAQVCSTSSHAYICPAVDGGYVLLGLPADAKAEVAFADVSWSASDTCESQVDALARAGCKCEIGPTYADVDEAEDLRTIGQQLLRESVES 243
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig66.15312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC1_9PHAE6.200e-14984.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGD1_ECTSI7.320e-9086.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1N4_9STRA4.320e-5546.19Nucleotide-diphospho-sugar transferase n=1 Tax=Tri... [more]
A0A7S2CAW3_9STRA2.010e-4138.02Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K0S136_THAOC1.910e-3839.57Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3P7T7_9STRA5.210e-3739.04Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6S9DJ27_HETAK6.780e-3438.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1D0W7_EMIHU1.990e-3137.02Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A8J6CB20_DIALT9.770e-3136.23Vesicle-fusing ATPase n=1 Tax=Diacronema lutheri T... [more]
A0A7S3X3J9_9SPIT2.780e-3040.08Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig66contigL-elsbetiae_contig66:23209..29895 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.7
Seed ortholog evalue5.4e-72
Seed eggNOG ortholog2880.D8LGD1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Uncharacterized protein conserved in bacteria (DUF2064)
EggNOG OGs2S8J2@2759,COG3222@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-06_002550.1
Exons6
Model size1173
Cds size771
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig66.15312.1prot_L-elsbetiae_contig66.15312.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig66 23484..29768 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816729.9216452-UTR-L-elsbetiae_contig66:23208..234831622816729.9216452-UTR-L-elsbetiae_contig66:23208..23483Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig66 23209..23483 +
1691683770.6524153-UTR-L-elsbetiae_contig66:23208..234831691683770.6524153-UTR-L-elsbetiae_contig66:23208..23483Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig66 23209..23483 +
1622816730.0087283-UTR-L-elsbetiae_contig66:29768..298951622816730.0087283-UTR-L-elsbetiae_contig66:29768..29895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig66 29769..29895 +
1691683770.7331913-UTR-L-elsbetiae_contig66:29768..298951691683770.7331913-UTR-L-elsbetiae_contig66:29768..29895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig66 29769..29895 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816729.9346116-CDS-L-elsbetiae_contig66:23483..235351622816729.9346116-CDS-L-elsbetiae_contig66:23483..23535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 23484..23535 +
1691683770.6635594-CDS-L-elsbetiae_contig66:23483..235351691683770.6635594-CDS-L-elsbetiae_contig66:23483..23535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 23484..23535 +
1622816729.945204-CDS-L-elsbetiae_contig66:23679..238011622816729.945204-CDS-L-elsbetiae_contig66:23679..23801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 23680..23801 +
1691683770.6759794-CDS-L-elsbetiae_contig66:23679..238011691683770.6759794-CDS-L-elsbetiae_contig66:23679..23801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 23680..23801 +
1622816729.9613647-CDS-L-elsbetiae_contig66:25815..260121622816729.9613647-CDS-L-elsbetiae_contig66:25815..26012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 25816..26012 +
1691683770.6858058-CDS-L-elsbetiae_contig66:25815..260121691683770.6858058-CDS-L-elsbetiae_contig66:25815..26012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 25816..26012 +
1622816729.9729614-CDS-L-elsbetiae_contig66:27668..277781622816729.9729614-CDS-L-elsbetiae_contig66:27668..27778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 27669..27778 +
1691683770.6979535-CDS-L-elsbetiae_contig66:27668..277781691683770.6979535-CDS-L-elsbetiae_contig66:27668..27778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 27669..27778 +
1622816729.9871023-CDS-L-elsbetiae_contig66:28562..287801622816729.9871023-CDS-L-elsbetiae_contig66:28562..28780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 28563..28780 +
1691683770.7109387-CDS-L-elsbetiae_contig66:28562..287801691683770.7109387-CDS-L-elsbetiae_contig66:28562..28780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 28563..28780 +
1622816729.998026-CDS-L-elsbetiae_contig66:29696..297681622816729.998026-CDS-L-elsbetiae_contig66:29696..29768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 29697..29768 +
1691683770.7213619-CDS-L-elsbetiae_contig66:29696..297681691683770.7213619-CDS-L-elsbetiae_contig66:29696..29768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 29697..29768 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig66.15312.1

>prot_L-elsbetiae_contig66.15312.1 ID=prot_L-elsbetiae_contig66.15312.1|Name=mRNA_L-elsbetiae_contig66.15312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MVEGGKENKAKRATLVLVAKYPTPGSSKTRLIPAFGTVLAAQLAMAMLQD
LLSRFSIEDPTGEFRKVFVYAPPSAGPAVNKMLRDLGLDKTWDAEPVSAG
TALRESGLTTILEAALASARSSERDGAVIFVGMDTPELPWSEVMAAKSSA
EKEGKAYICPASDGGYTLLGLPPAAERGTFEGVKWSDALTCKSQVLALAS
MGIHTRIGGTYHDVDEADDVAGLERRSPHTVTESLCPQTLGVARAALQLL
PRVWVG*
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mRNA from alignment at L-elsbetiae_contig66:23209..29895+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig66.15312.1 ID=mRNA_L-elsbetiae_contig66.15312.1|Name=mRNA_L-elsbetiae_contig66.15312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6687bp|location=Sequence derived from alignment at L-elsbetiae_contig66:23209..29895+ (Laminarionema elsbetiae ELsaHSoW15)
GCCATTTACGCGTCGCCGCTCATCAATCGCACTCCATCGTTGTTGAGCAC
TGGACCACTGGGCTTGAGGTTCAACCGAAGTGTGATCGTGACACTTGATC
CACAAACTTTTACCTTCTGTCTCTGCCGCAGGCTGTTATTGGCTAGCTTT
CTCGCGCGTGCCTGGTGCCACGTACTACAGACGAACGAGCCTGGCCAACC
GGCAAACGTAGGGTGAGCTGAAAAAAGCGCATCTCCGCACGGCGGGCTCA
CACAATCTGTGTTACCAGCGGCAACATGGTGGAGGGCGGTAAGGAGAACA
AGGCCAAGCGTGCGACGTTAGTATTAGGTGAGAGAAACTCGCGAGAAAAA
AGCGCACCCTCCGCCCCTTGCCATCGACGCGTCTTTTTCGCCACGAAAAA
GAAGGCTGATTTGCTGATTTGATTTCCGCATGTATTCCATCTCCTCCGTC
GGCTGTTCCGCGCTCCCCCAGTGGCAAAGTATCCCACACCAGGGTCAAGC
AAGACCAGGCTAATTCCAGCCTTCGGGACGGTGCTCGCGGCGCAGCTCGC
GATGGCCATGCTGCAGGATTTGTTGAGCCGATTCTCGATCGAGGTGAGAG
AGGGACGGAGAGGTTGGTTGGTTGAATGTCCGTACGGGCCGGTATTCAGG
AGTTGGCGCTTCTTTGTTTGAAGGAGGCGAGCATGAATTCGCCGACACGC
ACGGCTTCGTCGCTGCGCTCTTTCCCGCGGTGGCACACACGCGCCAGAGT
AGCCAGCAAGGCCAACGGCTGTCGAAAACAGCGCGCGCGCGCTTGTGTTG
GCGGAGTTAGGATACGCGATTTGCGCGTGTGCGTGATGTTTTGGTTTCCA
GGGCAACCTTGCCTGCAGACGCGCGGCGCGATCGCAGCCACAGTTCGTAG
AGCGCTAGTACTGCTGTGGGAGCACTCAACGTTAATCTGTAGGTTGTACC
TTCGACCTTTTTTTGTGGTGAGCGATTTCGCCGACCGTCGCTGTGTCGCT
TTCGTAGGTAAAAAAAAACATCTTCACGGAGTTCATCTCACAGGGAAGGA
AAGAGTTAAATTTGAAATCCTCTCTCTCCTTCCCCCTCTCCCCCTCTACC
GCTGACTGCTGTGTATCCCGCTTGGCTCAACAGCTTGAGTTCTTGCTACT
TGATAGTCTCTCAAAGGAGAAGTAAACTCCTGGGACTGATGTGTACGTGT
GTGCGCGCAGCGATCTAGCCACACCCATTGTGTCCGGTAATTCGCGGCAT
CCTCATGCGTACTTGATGTTGCTGTTGTGTGGAAATCTGAGATTTCGCCG
AGCTGTAATCTGAGTCGCATGCTTACGTTGGTATGTTATGAACAGCAGAC
AGCAGCAGTTGGGAGTGTGCTGACCGGTATTGAAAACGCTGTTCATTGTG
AGGACAGCGTGTTTGCTCTTACCGCGGGTCGGATTTCCCAACGAATGCAT
GAAAACTAAACAAGCGACCAGGTGACCTTGACGGAATTTGCGGATTCGTG
CCTGCAGCCCGGTACGATACGGGTTGTACAGGTTACTTTTGTACCTACAG
CATAATAGCCTCCCTGTTAACGCCTACAGGGTAGGTCGCTAGCGCCCGTC
TGCAGATGCGAAGTATGTACGTGTGTACACGATCAAGAGCAACAGGTATC
GGACACTTAATTAGTACATCCAATGATAGCATCTCATGCAAGACACGAAA
CGGTTTTTTGTACAACGTATGTACCCTGATACCCCGATACCTGCTAGACT
CGCGTGGTTGCAGTTGCACTGCTGTAGGAGCTGGCCCACCCTTTGTGCGA
GTTTGTGCATATTAGCCCGACCTTATTGTAAATTGTAAAAACCTACCCTG
CTGTACTTGTACATTTGTGTGGATCCACCTGGTAGGCATACCTGTTCTAG
CAGCGAAAACGCAACAATATTTTGTGCACACCCGATAAGAGAGACCTCGA
ATCTCTTTTGCCCCCCCCCTCTCCGGCGTCGAATCTCTTTTGCCTGGCTC
GTTCACTGGGCTCGAGCAGGTTACGTTTTCGTGTCGTGCGAGGGGTTGTT
TTTTCTTCCCTAGATTTGGGGAACAAACCGGTGCAGTGTTCCGACAGTAG
TTATTTTAATTGATTCTTCATGTGTAGCAGGCCTTTGCTCCGTTGGCTTT
TTACGAAATTGCAGACGGACAATGATCCTTTATTATATTGTACTGGTTTT
ATTTTAGAAAACAAGATGTATGTATGTATATACCTCTAAAACGACAAAAA
GTGGCCAACGAGCAAAGGCCTATTCATGTGTGGTAATAAATAGTAAATAA
TTGGTAGCTGATGGCGACTAAATTAATCCGGATTCAATCCGCCCATTGCT
CCCCAAATTTGGCTCCGAGACAAAACACACCGATGGAGAGTACGGTCGTG
AAGTCTAGACTCCAAGCAGGTCTCTGTGAGACGAGCACGCAGCGAAAATG
ACTATTTTCACAGATTCCAACAGAAATAGCCCGCGGAGATATACCCGGAA
CAAAATTGTCAGCGGCCTCCAGGAATTCCAATTTGGGATCTACCTTAAAA
CAATTGGCGTCAAACAACGGCAAATTAATTTAAAAATAAAATCATAATTT
TACACAGGATCCCACTGGCGAGTTTCGGAAGGTTTTCGTCTACGCCCCGC
CTTCCGCGGGGCCCGCCGTTAACAAGATGCTCAGGGACCTGGGTCTGGAC
AAGACTTGGGACGCGGAACCGGTGTCGGCGGGGACGGCGCTGCGGGAGAG
CGGGCTCACCACCATACTCGAGGCGGCGCTGGCGAGCGCAAGATCAAGCG
AGAGGTATGTATACATAGTCTATGAGAGTGTGTGATTTAGTAGTGTGCAC
GTCTCGTTCTTCGGTGGTGTGTGGAATTCGAGACGCAAGAGAGGAGTGGG
TGTGTGGGTTGGTTAGCTGTATGCGACCGTAGTTTTTCAAAGTCTTGAAA
ATAAACCAGGCAACCGAAGAAGGAACCTCCCAACAATAGAGAAGAGACTC
CGTGGTGAACTTACAATTTCAATACAGCTGTTATTAGTGATGTAAACCTG
GCCCGGCCCGAGGTAGAACCACACCCGAAGTATTATAAAAGTTCGAACCA
AGCCTTTTCGTCTGTGTCGTTGTTTCATGGATCACAACAATCCCGCCGCA
GACTATGCTGTGCTGTGCTGTGCTGTGCTGTGCTGAGCTGAGCTGAGCTG
AGCAGGGTGTGTGTGTGTTCAGCTGAGTGAGATCCGAGCGCATACATGCA
TACCAGCATGCTGTTCGATGTAAGATGCTCGGGCGCAAACTGGCACAGCA
GTCACGTCATCATCTTGGTGTCTGCATGTTGTTGTTACTCACATTATTCA
ATCTGTATCCCAAGAACACCGGCCCGTGGTTACAAAATGGCTAGAGCCAA
CAGAAGGTCCGAAAGGGACACAGGCGATATCCCGCCTTACACAGAGCGCA
GAGTAAGTCAGCGCAACCATTAGTTAAACTTGGACTCCCACCATACCGCC
CACACCCTGTGATCTCCATGATAAACTGTGCCCCGGTGAGACATGTGCCC
GAAAGGCAGCGGTACCGATTGACCGCCCCCGCGTGGGAGGTCTTGACAGT
GGGGAGGCACCGGCAACGGAAACGGTACACCGGACACGGGTACAAATACA
CTGCAAATACACCGAGATACACCTAATTTTAGGCAAAAACAATTTTCCGA
TTCCCCACGCGTCCTACTGAACCACGCAAGTTACAAATCTCCTTCGACTG
TAGAGTACTTACACGTCTCCTAGTTTACTTAAACCAATGCACGGTTGCCG
GCTACGGCAAGATAACTACTACTGTATATTGCCTGTGCAAAAAAAAACGT
ACGGATCGTGGTGGATAGTACGGAAAGGGAACGCGAATGCTGTCTGAAGT
GCTCTGCAGCAGTAGTACAAGCAACCGATCCGTTTCGTTCTGCATTGTAC
GTAGGTATATAGTACCCTTGTACCTCGCAGCCACCCTCACTAAAATTCGA
AACTCGATTGAACGTTACTTCGACTTCACCGGAGACAAAGAGAAGGGACT
GCTGAAACCTTGTCGCGATACAAATCTCAGGCAAGCACCGCGGAAGGTGG
GAAGCACCGCGGAAGGTGGGAAGTGGGGGCCTCGGTGAGAGGAACCCTTC
TGTGCGACCACGGTTCAGGGCCTACTCGGGCAAAGAACCCTTGTGGCAAG
AAGCCCGTCGAGCACTAGAAATAAATATTAAGAAGAAAAAAACGTGACTT
CGCCTTGTGACGCCCCCTTAATACCGTTATCGTCAACAAAACCGCGTGTC
CCGTGTAGGGAACCGTTCCTGGTCAAACACGCGAGGTGCGTACGCACATG
GCATTTAGATTCTTCTCCCGCTCATAGTCCGAGCTGTTTGCGCACGCACA
CACCCATACCCGCCCCCCGCCTGTTACTCTTACCGACCCGCGCCGCCCTT
GACTCCACAGAGACGGGGCCGTTATCTTCGTGGGGATGGACACTCCGGAG
TTGCCGTGGTCAGAGGTGATGGCGGCCAAGAGTTCCGCGGAGAAGGAGGG
GAAGGCCTACATTTGCCCAGGTGTGTTTCGGGGGGGGGGTTGGGAGAGCT
TGGCTCGTAGATAATACAAATGCAGCAGTTCTTGTCTTTTTCCTGCTTCG
TTTGACAAGTATCTCGGGGAGCAGCGCTGTCGTATTTTCGTATTCGTTTG
GTTGTTGATCGTTGGTGTCGGTTTTGCTCATGAACGTGTGTGCCGGCCCC
GTGAGACTTGACGTGTGGATTGCAACCGCGGTGCGGCAATTTGTTTTTGT
TTCTTTTGGTGCGGGGCGTCTGTCCGTCATCTGTTGTCCTCGAAACACCT
CCGTGGATAGGTTTGGAATTGGGTTATACGCGCACGTACGTGACCGACCT
AACCCCAACCCTCACGGACGTCCAAACCGGGGCCGTGGTCGCGAGACTGG
CACGAGCGCAGCTGCGCCACGTTCGCGGTCAGCACGGTCAGCATGCTGCG
CGCGCTATTTTGACCGATCACGAGTCGAGTCGTGCATGTTCTTGTTTGCA
CATCTTCGGCCTTATTTAAGGAATAGGCCGTCGGTATACATTTTGGACTG
ACACCAACGACCACCTTGGGGGCGCTCACTCTGCTCGGGCGCTGTCGTGG
CTTCCCCCTCCCCCCCTTGCTGTACGTACGCCTGCACACACAGCAAGCAG
CGTTGGTAGTACGCTTGTTGGCCAGCGTTTACGTATCGCTCCGTCGTGGC
GCCCCCAACTCTTTTAACAACCGCCCCCCCTGACCAACATCTCTTCACGA
CCCCCCCCCACCCCCCCTTCCGCGCGTCCGAACCCAACCCCTGCCCCACC
CCAGCCTCCGACGGGGGCTACACCCTCCTGGGGCTTCCGCCGGCGGCGGA
GCGAGGCACGTTCGAGGGCGTGAAGTGGTCGGACGCGCTGACCTGCAAGA
GCCAGGTGTTGGCCCTTGCGTCGATGGGGATCCACACCAGGATCGGGGGC
ACGTACCACGACGTGGACGAGGCGGACGACGTGGCCGGGCTGGAGAGACG
GTCCCCGCACACGGTAACGGAGGTGAGAGACAAGGGACAGGGACGCAGAG
AGAGAGAGAGAGAGCAGAGCGGAGGACGGAAGTAAGAGGAGTATATAGTA
CGCTGGTCTGTATAGATACGCGGCGAGTTGGCTGGCGGGGGGGACGACCA
AGCGGGCCCCGTGACTGATCGATCCATGGGAGGGAGAGAGGGGCGGCTGA
GAGAGAGAGAAACGGTCCTGCGTGTGCCCGGGGGTTGGCGGAGGTGTTGG
CGGTCGGTAGGCTGGGGGCCGAAAAGTCGCCCGCCTCCTGTGGGCTGCAG
GCATCACTTCGCGCGCTTGACAACATCGCGAGGTTCGTTTTCATTGATGG
ATGTACATGGCTTTGTCATCAGCCGGAACTACGAGGACAGAGCGATATTT
GCGGGGGGCATCAGAAATGGTGTGTCCTGAGAAATTGCTGTTAGTTGTCT
CCTTGCCCCCCCCCTCCTCCCATTCCGCGCTCTCTTGTCTTCTTGGGTTT
GGTAGTTCATACGTTGCCGTTGGCCTCGCCAGCTATATAGGGCTAACCCT
AACCCTAACCCTAACCCTATAGCCTTTTATGGCGACGGGATGTACAGTCA
AGCGATCGGGCAAGCTGATTCACGAACGCCGACTGAAATTGGCCGCGTCA
AACCTGTCGCGATTGGAGGAGCCCCGTGCATGAAATGTCGACACTGACGC
CCCCCCCCCATATAGCCTTTTATGGCGACGGGATGTACAGTCAAGCGATC
GGGCAAGCTGATACACGAACGCCGACTGAAATTGGCCGCGTCAAACCCCT
CGCGATTGGAGGAGCCCCGTGCATGAAATGTCGACACTGACGCCCCCCCC
CCCTCTGCCTTTTTCGCGGCTCGCCCTTTTTGTTGTCTGTGCGCGTATTC
CGTGTTTTCTTCCACGACTCGTTGATCCCCAACGCCAGTCGCTTTGCCCT
CAAACCTTGGGAGTAGCTAGAGCGGCGCTGCAGCTCCTGCCTCGCGTCTG
GGTAGGCTAAAAAGCAAGGCTAGGCTACGCTGAAGGACTTGTCGCGAGGG
AGAGGGCAGGAGAGGAGGACTGTCCAGGACAGCCTATAGGATGTACCCTC
CGAGCTGGGCGGAAGAAAGAAAAGGTAGAAAAGGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig66:23209..29895+

>mRNA_L-elsbetiae_contig66.15312.1 ID=mRNA_L-elsbetiae_contig66.15312.1|Name=mRNA_L-elsbetiae_contig66.15312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig66:23209..29895+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAGGGCGGTAAGGAGAACAAGGCCAAGCGTGCGACGTTAGTATT
AGATGGTGGAGGGCGGTAAGGAGAACAAGGCCAAGCGTGCGACGTTAGTA
TTAGTGGCAAAGTATCCCACACCAGGGTCAAGCAAGACCAGGCTAATTCC
AGCCTTCGGGACGGTGCTCGCGGCGCAGCTCGCGATGGCCATGCTGCAGG
ATTTGTTGAGCCGATTCTCGATCGAGTGGCAAAGTATCCCACACCAGGGT
CAAGCAAGACCAGGCTAATTCCAGCCTTCGGGACGGTGCTCGCGGCGCAG
CTCGCGATGGCCATGCTGCAGGATTTGTTGAGCCGATTCTCGATCGAGGA
TCCCACTGGCGAGTTTCGGAAGGTTTTCGTCTACGCCCCGCCTTCCGCGG
GGCCCGCCGTTAACAAGATGCTCAGGGACCTGGGTCTGGACAAGACTTGG
GACGCGGAACCGGTGTCGGCGGGGACGGCGCTGCGGGAGAGCGGGCTCAC
CACCATACTCGAGGCGGCGCTGGCGAGCGCAAGATCAAGCGAGAGGATCC
CACTGGCGAGTTTCGGAAGGTTTTCGTCTACGCCCCGCCTTCCGCGGGGC
CCGCCGTTAACAAGATGCTCAGGGACCTGGGTCTGGACAAGACTTGGGAC
GCGGAACCGGTGTCGGCGGGGACGGCGCTGCGGGAGAGCGGGCTCACCAC
CATACTCGAGGCGGCGCTGGCGAGCGCAAGATCAAGCGAGAGAGACGGGG
CCGTTATCTTCGTGGGGATGGACACTCCGGAGTTGCCGTGGTCAGAGGTG
ATGGCGGCCAAGAGTTCCGCGGAGAAGGAGGGGAAGGCCTACATTTGCCC
AGAGACGGGGCCGTTATCTTCGTGGGGATGGACACTCCGGAGTTGCCGTG
GTCAGAGGTGATGGCGGCCAAGAGTTCCGCGGAGAAGGAGGGGAAGGCCT
ACATTTGCCCAGCCTCCGACGGGGGCTACACCCTCCTGGGGCTTCCGCCG
GCGGCGGAGCGAGGCACGTTCGAGGGCGTGAAGTGGTCGGACGCGCTGAC
CTGCAAGAGCCAGGTGTTGGCCCTTGCGTCGATGGGGATCCACACCAGGA
TCGGGGGCACGTACCACGACGTGGACGAGGCGGACGACGTGGCCGGGCTG
GAGAGACGGTCCCCGCACACGGTAACGGAGCCTCCGACGGGGGCTACACC
CTCCTGGGGCTTCCGCCGGCGGCGGAGCGAGGCACGTTCGAGGGCGTGAA
GTGGTCGGACGCGCTGACCTGCAAGAGCCAGGTGTTGGCCCTTGCGTCGA
TGGGGATCCACACCAGGATCGGGGGCACGTACCACGACGTGGACGAGGCG
GACGACGTGGCCGGGCTGGAGAGACGGTCCCCGCACACGGTAACGGAGTC
GCTTTGCCCTCAAACCTTGGGAGTAGCTAGAGCGGCGCTGCAGCTCCTGC
CTCGCGTCTGGGTAGGCTAATCGCTTTGCCCTCAAACCTTGGGAGTAGCT
AGAGCGGCGCTGCAGCTCCTGCCTCGCGTCTGGGTAGGCTAA
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