mRNA_L-elsbetiae_contig6596.15302.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6596.15302.1
Unique NamemRNA_L-elsbetiae_contig6596.15302.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A6H5KGK9_9PHAE (Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK9_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 2.440e-119
Identity = 181/206 (87.86%), Postives = 196/206 (95.15%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGE-EGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            QD QLGTGKT+K+TIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEI VS GWTECVGHADRSCYDLEMHS+KTGVAM+ASCKL EP+VVTEYKL++D+K LGKTFKAEQKKV+AALE+LSEKE ++LAF+AKL+ +GKASLGE  GFEITKGMCSWTKGSKKISEIKFTPSVIEPSFG G
Sbjct:  396 QDAQLGTGKTSKMTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEIQVSDGWTECVGHADRSCYDLEMHSKKTGVAMLASCKLPEPKVVTEYKLQIDRKALGKTFKAEQKKVIAALEALSEKEEDLLAFQAKLEEEGKASLGEGAGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGIG 601
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BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: D7FJG6_ECTSI (Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG6_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 6.220e-115
Identity = 180/206 (87.38%), Postives = 195/206 (94.66%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEG-FEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            QD QLGTGKT+K+TIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEI VS GWTECVGHADRSCYDLEMHS+KTGVAM+ASCKL EP+VVTEYKL++D+K LGKTFKAEQKKV+AALE+LSEKE ++LAF+AKL+ +GKASLGE   FEITKGMCSWTKGSKKISEIKFTPSVIEPSFG G
Sbjct:  793 QDAQLGTGKTSKMTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEIQVSDGWTECVGHADRSCYDLEMHSKKTGVAMLASCKLPEPKVVTEYKLQIDRKALGKTFKAEQKKVIAALEALSEKEEDLLAFQAKLEEEGKASLGEGAVFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGIG 998
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: K0T150_THAOC (HGTP_anticodon domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T150_THAOC)

HSP 1 Score: 260 bits (665), Expect = 3.380e-83
Identity = 125/205 (60.98%), Postives = 160/205 (78.05%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            ++DQLGTGKT  +++G AV  G+V+NETL YFM RTQLF+E IGMDP R+RFRQHL+TEMAHYA DCWD+EI  SYGW ECVGHADR+CYDL++H + T   MVA+ KL+E + +   KL+ D+K LGKTFKA+Q+ V  ALESL+E  ++     + L+ DGKA++  +GFEIT+GM +W K +KK+ EIKFTPSVIEPSFG G
Sbjct:   31 REDQLGTGKTKTISVGDAVSTGIVNNETLAYFMARTQLFMEKIGMDPARLRFRQHLTTEMAHYACDCWDLEIKSSYGWIECVGHADRACYDLDVHGKATKTPMVATLKLDEAKEIEIAKLKFDRKSLGKTFKADQRVVSGALESLAENWADFEPIASALETDGKATV--DGFEITQGMVTWKKTTKKVHEIKFTPSVIEPSFGMG 233
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BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A836C9B2_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B2_9STRA)

HSP 1 Score: 268 bits (685), Expect = 3.210e-82
Identity = 132/205 (64.39%), Postives = 160/205 (78.05%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            ++DQLG+G+T  +TIG AV+ GLV+NETLGYFM RTQLFLE IGMDP RMRFRQHL+TEMAHYAADCWDMEI  S+GW ECVGHADR+CYDL++H++KT VAMVA+ ++ EP + T YK   DKK +G TFKA QK VMAAL++L++    + AFEAKLD DG A L   GF + + M +W K  K + E KFTPSVIEPSFG G
Sbjct:  367 REDQLGSGRTQNITIGDAVRAGLVNNETLGYFMARTQLFLEKIGMDPLRMRFRQHLATEMAHYAADCWDMEIKTSFGWVECVGHADRACYDLQVHAEKTKVAMVAA-RMTEPHMETFYKFNGDKKRMGTTFKANQKAVMAALDALADDHPALEAFEAKLDTDGSAELA--GFTVDRAMIAWKKTEKMVQEEKFTPSVIEPSFGIG 568
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BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A7R9W799_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W799_9STRA)

HSP 1 Score: 253 bits (645), Expect = 7.800e-82
Identity = 121/205 (59.02%), Postives = 154/205 (75.12%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLG+GKT  + IG+AV  GLV+NETLGYFM RTQLF+E IGMDP R+RFRQHL TEMAHYA DCWD+EI  SYGW ECVGHADRSCYDL++H + T   M+A+ KL++P+ V   KL+ D+K+LGK F+ +Q+ V  ALE+L E  ++       L+ +GK ++  +GFE+TK M +W K  K + EIKFTPSVIEPSFG G
Sbjct:   42 RDDQLGSGKTKTLPIGEAVSSGLVNNETLGYFMARTQLFMERIGMDPNRLRFRQHLETEMAHYACDCWDLEIKSSYGWVECVGHADRSCYDLDVHGEVTKTPMLATLKLDKPKEVEVAKLKFDRKLLGKAFRQDQRVVSGALEALGENWADFEPVANALETEGKTTV--DGFEVTKDMVTWKKAKKMVHEIKFTPSVIEPSFGMG 244
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A7S4R2B6_9STRA (Glycine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R2B6_9STRA)

HSP 1 Score: 255 bits (651), Expect = 9.340e-80
Identity = 123/205 (60.00%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLG+GKT  +++G+AV  GLV+NETL YFM RTQLF+E IGMDP ++RFRQHL TEMAHYA DCWD+EI  SYGW ECVGHADR+CYDL++H + T   M+A+ KL+ PQ V   KL+ D+K LGKTFK +Q+ V  ALE+L+E   +     + L+ +GK  +  +GFEITK M +W K SKK+ EIKFTPSVIEPSFG G
Sbjct:  218 RDDQLGSGKTKTLSVGEAVSTGLVNNETLAYFMARTQLFMEKIGMDPTKLRFRQHLKTEMAHYACDCWDLEIKSSYGWVECVGHADRACYDLDVHGKATKTPMLATVKLDTPQDVEVAKLKFDRKALGKTFKKDQRVVSGALEALAENWEDFAKVASDLETEGKTVV--DGFEITKDMVTWKKTSKKVHEIKFTPSVIEPSFGMG 420
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A1Z5KMP6_FISSO (Glycine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMP6_FISSO)

HSP 1 Score: 260 bits (664), Expect = 1.480e-79
Identity = 126/205 (61.46%), Postives = 156/205 (76.10%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLG+GKT  V IG+AVK GLV+NETLGYFM RTQL++E IGMDPKR+RFRQHL+TEMAHYA DCWD+EI  SYGW ECVGHADR+CYDLE+HS+ T   MVA+ K++ P  +   K++ D+K+LG+ FK +Q+ V   L+ L+E           LD DGK ++  +GFEITK M SWTK SKK+ E+KFTPSVIEPSFG G
Sbjct:  327 RDDQLGSGKTKTVAIGEAVKSGLVNNETLGYFMARTQLYMEKIGMDPKRLRFRQHLTTEMAHYATDCWDLEIQSSYGWVECVGHADRACYDLEVHSKATKTPMVATEKVDPPVGIEYAKIKFDRKLLGQAFKQDQRIVSGLLDGLAEDWKNFEPIATALDTDGKTTV--DGFEITKEMVSWTKSSKKVHEVKFTPSVIEPSFGMG 529
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: B8BS17_THAPS (Glycine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS17_THAPS)

HSP 1 Score: 258 bits (658), Expect = 7.180e-79
Identity = 124/205 (60.49%), Postives = 158/205 (77.07%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLG+GKT  + +G AV  GLV+NETL YFM RTQLF+E IGMDP R+RFRQHL+TEMAHYA DCWD+EI  SYGW ECVGHADR+CYDL++H + T   M+A+ KL+E + V   KL+ D+K LGKTFK +Q+ V AALE+L+E  ++       L++DGKA++  +GFEITK M +W K +KK+ EIK+TPSVIEPSFG G
Sbjct:  334 RDDQLGSGKTKTIRVGDAVATGLVNNETLAYFMARTQLFMERIGMDPSRLRFRQHLTTEMAHYACDCWDLEIQSSYGWVECVGHADRACYDLDVHGKATKTPMIATMKLDEAREVEVAKLKFDRKALGKTFKGDQRVVAAALEALAENWADFEPVATTLESDGKATV--DGFEITKEMVTWKKETKKVHEIKYTPSVIEPSFGMG 536
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: B7FX58_PHATC (Glycine--tRNA ligase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX58_PHATC)

HSP 1 Score: 258 bits (659), Expect = 7.450e-79
Identity = 124/205 (60.49%), Postives = 159/205 (77.56%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLG+GKT  +  G+AV+ GL++NETL YFM RTQL++E IGMDP+R+RFRQHL+TEMAHYAADCWD+EI  SYGW ECVGHADR+CYDLE+HS+ T  +MVA+ K++ PQ +   KL+ D+K+LG+ FK +Q+ V   LESL+E  ++      KL+ DGK ++  EGFEITK M +WTK  K + EIKFTPSVIEPSFG G
Sbjct:  326 RDDQLGSGKTKTIACGEAVESGLINNETLAYFMARTQLYMEKIGMDPQRLRFRQHLATEMAHYAADCWDLEIKSSYGWQECVGHADRACYDLEVHSRATKTSMVATQKVDPPQEMEVAKLKFDRKLLGQAFKGDQRVVSGMLESLAESWTDFEPIATKLENDGKTTV--EGFEITKEMMTWTKQKKTVHEIKFTPSVIEPSFGMG 528
[Close]
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Match: A0A448Z3E7_9STRA (Glycine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3E7_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.790e-78
Identity = 120/205 (58.54%), Postives = 157/205 (76.59%), Query Frame = 1 
Query:    1 QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRMRFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTGVAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKESEVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGEG 615
            +DDQLGTGKT  + IG+AVK GLV+NETLGYFM RTQL++E IGMDP+R+RFRQHL+TEMAHYAADCWD+EI  SYGW ECVGHADR+CYDL++H++ T  +MVA+ K + P+ +   KL+ D+K +G  FK + + V  AL+ L+E   +       L+ADGK ++  +GFE+TK M SW + +KK+ E+KFTPSVIEPSFG G
Sbjct:  218 RDDQLGTGKTKTLKIGEAVKGGLVNNETLGYFMARTQLYMEKIGMDPERLRFRQHLATEMAHYAADCWDLEIKSSYGWVECVGHADRACYDLDVHAKATNTSMVATVKYDTPKEIEVAKLKFDRKKIGMVFKKDARTVSGALDKLAESWKDFEPIAKALEADGKVTV--DGFEVTKDMVSWEQSTKKVHELKFTPSVIEPSFGMG 420
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6596.15302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGK9_9PHAE2.440e-11987.86Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FJG6_ECTSI6.220e-11587.38Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculo... [more]
K0T150_THAOC3.380e-8360.98HGTP_anticodon domain-containing protein n=1 Tax=T... [more]
A0A836C9B2_9STRA3.210e-8264.39Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7R9W799_9STRA7.800e-8259.02Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4R2B6_9STRA9.340e-8060.00Glycine--tRNA ligase n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5KMP6_FISSO1.480e-7961.46Glycine--tRNA ligase n=2 Tax=Fistulifera solaris T... [more]
B8BS17_THAPS7.180e-7960.49Glycine--tRNA ligase n=1 Tax=Thalassiosira pseudon... [more]
B7FX58_PHATC7.450e-7960.49Glycine--tRNA ligase n=3 Tax=Phaeodactylum tricorn... [more]
A0A448Z3E7_9STRA1.790e-7858.54Glycine--tRNA ligase n=1 Tax=Pseudo-nitzschia mult... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6596contigL-elsbetiae_contig6596:2459..4327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.8
Seed ortholog evalue2.7e-98
Seed eggNOG ortholog2880.D7FJG6
Preferred namePRMT7
KEGG rclassRC00003,RC00055,RC00523,RC02120
KEGG koko:K01880,ko:K11438
KEGG ReactionR03654,R11216
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000287,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000902,GO:0000904,GO:0000959,GO:0001650,GO:0002164,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004081,GO:0004551,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006082,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006349,GO:0006351,GO:0006353,GO:0006355,GO:0006396,GO:0006397,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006464,GO:0006479,GO:0006518,GO:0006520,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007275,GO:0007276,GO:0007399,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008380,GO:0008469,GO:0008757,GO:0008796,GO:0009058,GO:0009059,GO:0009117,GO:0009165,GO:0009345,GO:0009653,GO:0009791,GO:0009889,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0012505,GO:0015959,GO:0015960,GO:0015965,GO:0015966,GO:0016043,GO:0016070,GO:0016071,GO:0016273,GO:0016274,GO:0016277,GO:0016358,GO:0016462,GO:0016569,GO:0016570,GO:0016571,GO:0016594,GO:0016597,GO:0016740,GO:0016741,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016875,GO:0017076,GO:0018130,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0019918,GO:0019919,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030097,GO:0030141,GO:0030154,GO:0030182,GO:0030424,GO:0030554,GO:0031175,GO:0031323,GO:0031326,GO:0031406,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032259,GO:0032501,GO:0032502,GO:0032504,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032989,GO:0032990,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034969,GO:0035166,GO:0035167,GO:0035241,GO:0035242,GO:0035243,GO:0035246,GO:0035247,GO:0035639,GO:0036094,GO:0036211,GO:0040029,GO:0042054,GO:0042165,GO:0042221,GO:0042393,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043021,GO:0043038,GO:0043039,GO:0043043,GO:0043046,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0043985,GO:0044020,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044431,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044703,GO:0044728,GO:0044877,GO:0046483,GO:0046686,GO:0046872,GO:0046983,GO:0048468,GO:0048513,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051171,GO:0051252,GO:0051276,GO:0051704,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070062,GO:0070127,GO:0070150,GO:0071514,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0097659,GO:0097708,GO:0098791,GO:0099503,GO:0120025,GO:0120036,GO:0120039,GO:0140053,GO:0140096,GO:0140098,GO:0140101,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903506,GO:1903561,GO:2000112,GO:2001141
EggNOG free text desc.peptidyl-arginine methylation, to symmetrical-dimethyl arginine
EggNOG OGsCOG0423@1,COG0500@1,KOG1501@2759,KOG2298@2759
EC2.1.1.321,6.1.1.14
COG Functional cat.Q
BiGG ReactioniMM904.YPR081C,iND750.YPR081C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko03036
Exons4
Model size615
Cds size615
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6596.15302.1prot_L-elsbetiae_contig6596.15302.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6596 2459..4327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.7033935-CDS-L-elsbetiae_contig6596:2458..26621622816728.7033935-CDS-L-elsbetiae_contig6596:2458..2662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 2459..2662 -
1691683769.973427-CDS-L-elsbetiae_contig6596:2458..26621691683769.973427-CDS-L-elsbetiae_contig6596:2458..2662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 2459..2662 -
1622816728.7181745-CDS-L-elsbetiae_contig6596:3160..33111622816728.7181745-CDS-L-elsbetiae_contig6596:3160..3311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 3161..3311 -
1691683769.9869447-CDS-L-elsbetiae_contig6596:3160..33111691683769.9869447-CDS-L-elsbetiae_contig6596:3160..3311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 3161..3311 -
1622816728.7297373-CDS-L-elsbetiae_contig6596:3644..37781622816728.7297373-CDS-L-elsbetiae_contig6596:3644..3778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 3645..3778 -
1691683769.9969733-CDS-L-elsbetiae_contig6596:3644..37781691683769.9969733-CDS-L-elsbetiae_contig6596:3644..3778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 3645..3778 -
1622816728.7412758-CDS-L-elsbetiae_contig6596:4201..43271622816728.7412758-CDS-L-elsbetiae_contig6596:4201..4327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 4202..4327 -
1691683770.0094922-CDS-L-elsbetiae_contig6596:4201..43271691683770.0094922-CDS-L-elsbetiae_contig6596:4201..4327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 4202..4327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6596.15302.1

>prot_L-elsbetiae_contig6596.15302.1 ID=prot_L-elsbetiae_contig6596.15302.1|Name=mRNA_L-elsbetiae_contig6596.15302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
QDDQLGTGKTTKVTIGQAVKDGLVDNETLGYFMTRTQLFLEMIGMDPKRM
RFRQHLSTEMAHYAADCWDMEILVSYGWTECVGHADRSCYDLEMHSQKTG
VAMVASCKLNEPQVVTEYKLRVDKKVLGKTFKAEQKKVMAALESLSEKES
EVLAFEAKLDADGKASLGEEGFEITKGMCSWTKGSKKISEIKFTPSVIEP
SFGEG
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mRNA from alignment at L-elsbetiae_contig6596:2459..4327-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6596.15302.1 ID=mRNA_L-elsbetiae_contig6596.15302.1|Name=mRNA_L-elsbetiae_contig6596.15302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1869bp|location=Sequence derived from alignment at L-elsbetiae_contig6596:2459..4327- (Laminarionema elsbetiae ELsaHSoW15)
CAGGACGACCAACTCGGCACGGGCAAGACAACGAAAGTGACCATCGGACA
GGCGGTGAAAGACGGGCTTGTGGACAACGAGACCCTTGGGTACTTCATGA
CCCGCACCCAGCTCTTCTTGGAAATGGTATGTATATAGAAGTGCATGTGC
GTTCAAAACGTCTATGGTACGAAGTAGCGTATGTGCATCGATACATTTAC
GTTCAATTTGCTTCAGACAAGTGGGAGTTGAGTCTATCGACCGAAAAACA
TTGTTCTGAAGGTGCCCTGGTGAAGATGCAGCAATCCCTCCCCGATGTGT
GCGGCCTCTTCGTCGAAGTTTTTTTTCCTCGTGAAGACGAGAGAACGAAA
CAAGCCCGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTG
TAAACCACTTTAAACCGCTCGCTGACAGGTGCAGCGCTGTGTGACCTTGG
CTTTATTTTGTCGATCTCCGTACACAGCAACCCACAAAAACCTTACACTC
CTTTATATTTATTTTTGTCCAATCGAAACGAATGTAATATTGTAACCAGA
TCGGGATGGACCCGAAGCGCATGCGTTTCCGGCAGCACCTCTCTACGGAG
ATGGCGCACTACGCCGCCGACTGCTGGGACATGGAGATCCTCGTGTCGTA
CGGATGGACGGAGTGCGTGGGGCACGCTGACAGGTATGTATGTAAAGCAG
GTACCTGGTATGTAGTAAAACAGGAAACGTGCCACGGGGAGGGGGGGGGT
CTTAGTTGTGTAGCACCGTGGTGGGCAGAGTTTAAGATGATGAGGAGTTA
GGCTTGTGATGTCTTCCTTTATCTTTGTCGAGAACCCTGGGAAGATTCCC
ATGTGTTGTTTCGGAACAAAAGGAGAAGAAAAAAATGCCCTTGCCATTCC
ACGAGTAGGAAGATTTAATAGAGGCCAAGCCCCTTCGTCGCGTTTGAAGG
TGACGGTAGTGACACGCATTTTGCGCACGTTGCTGGCGCCACTTTTACTA
CCGATGGACAACTCAGATCGTGCTACGACCTAGAGATGCACTCCCAGAAG
ACCGGAGTGGCGATGGTGGCGTCCTGCAAGCTTAACGAGCCTCAGGTGGT
GACGGAGTACAAGCTGCGGGTCGACAAAAAGGTCCTTGGGAAGACCTTCA
AGGCAGAGCAAAAGAAGGTGAACCCATGGGTTGTTGAAGAACATGTAGAT
GGATGGGTACATAGGTAGTAAATTATCAAAAATTGCGCCAGGCTACGGAA
GGGTGATCGCCTGTGCTTGTGGCTTGAACGCAGACGTTGTGATGATGCAC
GCAACCAAGCGTATTGATGAAGAAGTCTTTCGATGCGCGACGCACGCGGC
ATCACCGGCGTGACGCACGTAGACCTCTGGCTAGACCTGTAGCCCAGACT
ATATATAGCTAGCTAGACGTGGGGCCCGGTTGTTTATTTCAGCACGAACA
TCGAGGCCAGCAGGCACGCCATACATATACGTACAACACGCCTGTTCATG
GCAAGACCTCCGGAAGAGGTATGTGCGTGGACGTAATGTATCGTGTGCAA
GGCGAAGCCGCAGTTGTCGTGCCACTACTATATTGTGCCGTGGAGTACTG
CTGTACAGTAACAATGCTGTCGTGACGTCGTTGTGGCTTATTTCATGGTG
ATGGTGGTGATGCAGGTGATGGCCGCACTGGAGTCTCTCTCCGAGAAGGA
GTCGGAGGTGCTGGCGTTCGAGGCGAAGCTAGACGCGGATGGGAAGGCTT
CTCTCGGCGAAGAGGGCTTCGAGATCACCAAGGGCATGTGCTCGTGGACG
AAGGGCAGCAAGAAGATCTCAGAGATCAAGTTTACGCCCAGTGTTATCGA
GCCTTCGTTCGGTGAGGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6596:2459..4327-

>mRNA_L-elsbetiae_contig6596.15302.1 ID=mRNA_L-elsbetiae_contig6596.15302.1|Name=mRNA_L-elsbetiae_contig6596.15302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig6596:2459..4327- (Laminarionema elsbetiae ELsaHSoW15)
CAGGACGACCAACTCGGCACGGGCAAGACAACGAAAGTGACCATCGGACA
GGCGGTGAAAGACGGGCTTGTGGACAACGAGACCCTTGGGTACTTCATGA
CCCGCACCCAGCTCTTCTTGGAAATGCAGGACGACCAACTCGGCACGGGC
AAGACAACGAAAGTGACCATCGGACAGGCGGTGAAAGACGGGCTTGTGGA
CAACGAGACCCTTGGGTACTTCATGACCCGCACCCAGCTCTTCTTGGAAA
TGATCGGGATGGACCCGAAGCGCATGCGTTTCCGGCAGCACCTCTCTACG
GAGATGGCGCACTACGCCGCCGACTGCTGGGACATGGAGATCCTCGTGTC
GTACGGATGGACGGAGTGCGTGGGGCACGCTGACAGATCGGGATGGACCC
GAAGCGCATGCGTTTCCGGCAGCACCTCTCTACGGAGATGGCGCACTACG
CCGCCGACTGCTGGGACATGGAGATCCTCGTGTCGTACGGATGGACGGAG
TGCGTGGGGCACGCTGACAGATCGTGCTACGACCTAGAGATGCACTCCCA
GAAGACCGGAGTGGCGATGGTGGCGTCCTGCAAGCTTAACGAGCCTCAGG
TGGTGACGGAGTACAAGCTGCGGGTCGACAAAAAGGTCCTTGGGAAGACC
TTCAAGGCAGAGCAAAAGAAGATCGTGCTACGACCTAGAGATGCACTCCC
AGAAGACCGGAGTGGCGATGGTGGCGTCCTGCAAGCTTAACGAGCCTCAG
GTGGTGACGGAGTACAAGCTGCGGGTCGACAAAAAGGTCCTTGGGAAGAC
CTTCAAGGCAGAGCAAAAGAAGGTGATGGCCGCACTGGAGTCTCTCTCCG
AGAAGGAGTCGGAGGTGCTGGCGTTCGAGGCGAAGCTAGACGCGGATGGG
AAGGCTTCTCTCGGCGAAGAGGGCTTCGAGATCACCAAGGGCATGTGCTC
GTGGACGAAGGGCAGCAAGAAGATCTCAGAGATCAAGTTTACGCCCAGTG
TTATCGAGCCTTCGTTCGGTGAGGGAGTGATGGCCGCACTGGAGTCTCTC
TCCGAGAAGGAGTCGGAGGTGCTGGCGTTCGAGGCGAAGCTAGACGCGGA
TGGGAAGGCTTCTCTCGGCGAAGAGGGCTTCGAGATCACCAAGGGCATGT
GCTCGTGGACGAAGGGCAGCAAGAAGATCTCAGAGATCAAGTTTACGCCC
AGTGTTATCGAGCCTTCGTTCGGTGAGGGA
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