prot_L-elsbetiae_contig11768.1529.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11768.1529.1
Unique Nameprot_L-elsbetiae_contig11768.1529.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length444
Homology
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BLAST of mRNA_L-elsbetiae_contig11768.1529.1 vs. uniprot
Match: A0A6H5L347_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L347_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 5.490e-144
Identity = 273/445 (61.35%), Postives = 317/445 (71.24%), Query Frame = 0 
Query:   14 PTSLRELIERVPQVLGAQAPTALHLEQCASADAVETMARAEARLLKSAETFFEPLFRVSVLDNLGRKEDPFAEPGDEDFPSQAPIEELKTERRRVDAIADRAISEQPPLRASAEKVQQQAAHLQERMEKLALQAEAAXXXXXXXXXXAGLLDTVYAGDGADGAAERARETDRLDDEALRRGAEVLALAEAKKAALVEEAAARRADLARQRREVDALEKEQ-AQALAEAAGPISNAGR--------RAEASREMESLAGVAGMSAAGLERCVREEEALVERNGGIRGWYEATVANVELLGGVRVSHRLLFGTGGGGGGVEGMELMVELGAGQIMEVTVSSVDGGLGSVQLCHAQSGA-----AGVSAPELEELRRTADALPAPQNLRMLVREALGRARCAAVVEEHVRLMRGRYVTAYTAPPREFTVTLNAGLVAGFRLHADYPKV 444
            PTSLREL+ERVPQVL AQ+P ALH++  ASADA+E+++RAEARLLKSAETF    F VSVL+NLGR+ DPF EPGDEDFP QA  ++L+ ERRRVD I DRA+SEQ PLR+SAE+V++QA HLQER++ L LQ EA             ++D VYAGD  D A ER  +  R ++  LR  ++ L   EAK+  L E AAA RA+L  Q+REVD LE+EQ A ALA A    + AG         RAEASREME+L GVAGM  A LE C REE+ALV RN GIR WY ATVA VE LGGVR+SHRLLFG G GG  VEGME MV LG+G  MEVTVS+VDG L S QLCH Q G      AG+S  ELEE+RR ADALPAPQNL  LV EAL RA CAAV EEHVR +R RY+T Y +P RE TVT+ AG+VA F L ADYPKV
Sbjct:   14 PTSLRELLERVPQVLNAQSPGALHMQSRASADAMESVSRAEARLLKSAETFHPHTFSVSVLENLGRR-DPFIEPGDEDFPDQAADDDLEAERRRVDEITDRALSEQQPLRSSAERVEEQAMHLQERIKGLTLQVEADPALRSSGGARLSIMDKVYAGD--DRADEREADI-RNEETLLREDSQALGAVEAKRTVLAERAAAVRAELLLQQREVDLLEREQHAVALAAAETAATGAGGAAAGSNGWRAEASREMENLVGVAGMPEARLEACEREEDALVRRNTGIRDWYAATVAEVENLGGVRLSHRLLFGAGAGGR-VEGMEFMVGLGSGLTMEVTVSAVDGKLSSAQLCHGQGGGGAAGFAGISPSELEEMRRAADALPAPQNLGKLVIEALSRATCAAVREEHVRQVRRRYLTGYRSPSREVTVTMGAGIVACFHLAADYPKV 453
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11768.1529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L347_9PHAE5.490e-14461.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..239
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableCOILSCoilCoilcoord: 126..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11768contigL-elsbetiae_contig11768:2320..5667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11768.1529.1mRNA_L-elsbetiae_contig11768.1529.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11768 2307..5667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11768.1529.1 ID=prot_L-elsbetiae_contig11768.1529.1|Name=mRNA_L-elsbetiae_contig11768.1529.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=444bp
MSTAAVGSTSQRAPTSLRELIERVPQVLGAQAPTALHLEQCASADAVETM
ARAEARLLKSAETFFEPLFRVSVLDNLGRKEDPFAEPGDEDFPSQAPIEE
LKTERRRVDAIADRAISEQPPLRASAEKVQQQAAHLQERMEKLALQAEAA
SSGGGGGGGGAGLLDTVYAGDGADGAAERARETDRLDDEALRRGAEVLAL
AEAKKAALVEEAAARRADLARQRREVDALEKEQAQALAEAAGPISNAGRR
AEASREMESLAGVAGMSAAGLERCVREEEALVERNGGIRGWYEATVANVE
LLGGVRVSHRLLFGTGGGGGGVEGMELMVELGAGQIMEVTVSSVDGGLGS
VQLCHAQSGAAGVSAPELEELRRTADALPAPQNLRMLVREALGRARCAAV
VEEHVRLMRGRYVTAYTAPPREFTVTLNAGLVAGFRLHADYPKV
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