mRNA_L-elsbetiae_contig6583.15287.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig6583.15287.1
Unique Name	mRNA_L-elsbetiae_contig6583.15287.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 1.340e-89
Identity = 141/232 (60.78%), Postives = 185/232 (79.74%), Query Frame = 2

Query:    2 SGLVLGVCFTLENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGDGARSES 697
            SGLV G+CF +E++MVT+CWT  DL GFIK +KFIE  +SNM+AIT+LAI VNLALI+ SHRT++RV+SVSSP L+ + LAIS+GI SV++P WE + V+GT FW+ ++++  Y  + VS+F++EF+VGICMF I+AWLLL R +EVKECW++  RIRYYF LT LGTAVN+ +GIC T FV+ +  +P L IWSW+ RY+H+ALDT VLYGVL  RE+ MDERG  ARS +
Sbjct:   59 SGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVL--REKDMDERGGNARSSN 288

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 6.530e-85
Identity = 134/246 (54.47%), Postives = 187/246 (76.02%), Query Frame = 2

Query:    2 SGLVLGVCFTLENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGDGARSESDLVVLSSGQTKPST 739
            +G++  +C+ +E++MVT+CW  ++LE  IKT+KF+E ++S+MLA+T+LAI VNLALI+ SHRT+ RV+SVSSP L+ + LAISMG+ + ++P WE ++V+GTSFW+ ++++ +Y  + VS+F++EF+VG+CMF IVAWLLL R +EVKECW++H RIRYY  LT LGT ++LS+GIC T FVL    Q  L IW+W+FRY+HIALDT VLYGVL  RE+ MDER   AR        + G   PST
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVL--REKDMDERVGNARPSDINSNSTVGVPPPST 253

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 4.340e-77
Identity = 135/258 (52.33%), Postives = 186/258 (72.09%), Query Frame = 2

Query:   35 ENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGDGARSESDLVVLSSGQTKPSTRQLRPAQRAGNSRGSRVTNNTNS 808
            +  M+++CW    LEGFIK +K++EQ++SNMLAITNLAI +NLAL++ SHRT+SRV SVS+P L+L+FLAIS+  A+ S+PFW + +V GT+FW+T+ ++A+  +I VS+  +EF+VGICMF IV+WL+  R R +KECWK+H RIRYYF LT +GTAVNL+LGI G ++V    +   LL  +W FRY H+ALDTIVLYGVLG R   MDE G  A S S     SSG+   S+   RP+   G  + S ++N +++
Sbjct:    5 QGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRH--MDEGGGSAASTSGT---SSGRLPASSGLPRPSNHRGMKKQSGLSNTSST 257

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 5.960e-73
Identity = 120/233 (51.50%), Postives = 165/233 (70.82%), Query Frame = 2

Query:    2 SGLVLGVCFTLENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGDGARSESD 700
            SG ++ +    E+VMV+ C+ + +L G IKTI F+  ++SNMLA TNL I +NLALI+ SHRT++RVK+VSSP ++ + L +S  +A+ ++P WE  +VLGT FW T+++  +  FI +S++ +EFLVGICM  IV WL + R  E+KECW+ H RIRYYF LT  GTAVNL LGICG  +V  +  +PL  IWSW+FRY+HI+ DT+VLYG L  RE  +DER +  RS  D
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGAL--REGSIDERAEADRSSQD 239

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 2.010e-71
Identity = 120/226 (53.10%), Postives = 160/226 (70.80%), Query Frame = 2

Query:   44 MVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGDGARSESDLVVLSSG 721
            MV +CW   ++ GF+K +KF+E  ASNMLAITNLAI  NLAL+I+SHRT++RVKS SSP L+ + LA+S+ +A  + PFW+  +V GT F + + ++    ++ VS F++EFLVGICMF IVAWLLL R  EVKECWKVH RIRYYFGLT +GT VNL+LG+CGT +V+    + LL++ +W FR++HIALDT VLYGVLG       + G  A+        + G
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGVPAATGHDEGPDAQRRCSAAAAAPG 226

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 9.260e-71
Identity = 117/212 (55.19%), Postives = 161/212 (75.94%), Query Frame = 2

Query:   44 MVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVLGERERIMDERGD 679
            M+++CW   +L  FIKT+KF+E  ASNMLAITNLAI VNL+LI++S R  S VKS+S+  L+L+FLA+S G+A++++PFW L ++ GT FW    N+ ++ F+ +S F VEFLVGICMF IV+WLLL R  E+KECW +H  +RYYFGLT LGT  NL+LG+CGT +V+++ + PLL+I+SW FR + IALDTIVL+ VL  +   +DER +
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKS--VDERAE 210

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 4.390e-61
Identity = 104/188 (55.32%), Postives = 144/188 (76.60%), Query Frame = 2

Query:    2 SGLVLGVCFTLENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQ 565
            SGL+  + F  E  MV++CW    L   IKT+KF E +ASNMLAITNLAI VNLALI++SHRT+SRV+S S+P LIL+FLA+S+G+A++S+PFW  ++V GT+FW+ +  +A + +I V+ F+VEF VGICM  IV WL++ R+ E+K+ WK+H RIRYYFGLT + T VNL+LGICGT +V+ +  +
Sbjct:   85 SGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.580e-59
Identity = 98/173 (56.65%), Postives = 139/173 (80.35%), Query Frame = 2

Query:   44 MVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNES 562
            M+++CW    LEGFIK +K++EQ++SNMLAITNLAI +NLAL++ SHRT+SRVKSVS+P L+L+FLAIS+  A+ S+PFW + +V GT+FW+T+ ++A+  +I VS+  +EF+VGICMF IV+WL+  R + +KECWK+H RIRYYF LT + TAVNL+LGI G ++V  + +
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDNA 173

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BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 4.520e-51
Identity = 92/179 (51.40%), Postives = 128/179 (71.51%), Query Frame = 2

Query:   32 LENVMVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSR-VKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQ 565
            ++  M+++CWT  +L   IKT KF+E ++ NMLA+TNLAI +NLAL+++SH      V S+SSP LI++ L IS+G A+ + PFWE I++ GT F+  + N+    +I +S FY+EF VGICMF IVAWLLL R  E+KECWK+H RIRYYFGLT + T VNL LGICG  +++ +  +
Sbjct:    1 MQATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179

[Close]

BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.570e-50
Identity = 92/174 (52.87%), Postives = 129/174 (74.14%), Query Frame = 2

Query:   44 MVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTVSRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEYHFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLTALGTAVNLSLGICGTTFVLTNESQ 565
            M+++CW   +L   IK +KF+E +++NMLA+TNLAI VNLAL+++SHRT+SRV S+SSP +I + L +++G A+ ++P W+ I++ GT F   S ++ +  +  VS F  EF+VGICM AIVAWLLL R +E+KECWKVH RIRYYFGLT + T VNL LGI GT +++  E Q
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIV-GEGQ 173

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6583.15287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
D7FTK5_ECTSI	1.340e-89	60.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FTK4_ECTSI	6.530e-85	54.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K8K6_9PHAE	4.340e-77	52.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWL8_9PHAE	5.960e-73	51.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNN1_ECTSI	2.010e-71	53.10	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LNP0_ECTSI	9.260e-71	55.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LNM4_ECTSI	4.390e-61	55.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNN2_ECTSI	1.580e-59	56.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNM5_ECTSI	4.520e-51	51.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRY2_9PHAE	4.570e-50	52.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6583	contig	L-elsbetiae_contig6583:3648..10072 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	5
Model size	1970
Cds size	795
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816727.1882472-UTR-L-elsbetiae_contig6583:3647..3690	1622816727.1882472-UTR-L-elsbetiae_contig6583:3647..3690	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6583 3648..3690 +
1691683768.9056268-UTR-L-elsbetiae_contig6583:3647..3690	1691683768.9056268-UTR-L-elsbetiae_contig6583:3647..3690	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6583 3648..3690 +
1622816727.2664878-UTR-L-elsbetiae_contig6583:8940..10072	1622816727.2664878-UTR-L-elsbetiae_contig6583:8940..10072	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6583 8941..10072 +
1691683768.966454-UTR-L-elsbetiae_contig6583:8940..10072	1691683768.966454-UTR-L-elsbetiae_contig6583:8940..10072	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6583 8941..10072 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816727.2009404-CDS-L-elsbetiae_contig6583:3690..3718	1622816727.2009404-CDS-L-elsbetiae_contig6583:3690..3718	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 3691..3718 +
1691683768.9180744-CDS-L-elsbetiae_contig6583:3690..3718	1691683768.9180744-CDS-L-elsbetiae_contig6583:3690..3718	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 3691..3718 +
1622816727.2154012-CDS-L-elsbetiae_contig6583:4453..4560	1622816727.2154012-CDS-L-elsbetiae_contig6583:4453..4560	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 4454..4560 +
1691683768.927179-CDS-L-elsbetiae_contig6583:4453..4560	1691683768.927179-CDS-L-elsbetiae_contig6583:4453..4560	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 4454..4560 +
1622816727.2303007-CDS-L-elsbetiae_contig6583:5230..5386	1622816727.2303007-CDS-L-elsbetiae_contig6583:5230..5386	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 5231..5386 +
1691683768.9368463-CDS-L-elsbetiae_contig6583:5230..5386	1691683768.9368463-CDS-L-elsbetiae_contig6583:5230..5386	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 5231..5386 +
1622816727.2417634-CDS-L-elsbetiae_contig6583:7469..7699	1622816727.2417634-CDS-L-elsbetiae_contig6583:7469..7699	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 7470..7699 +
1691683768.9470556-CDS-L-elsbetiae_contig6583:7469..7699	1691683768.9470556-CDS-L-elsbetiae_contig6583:7469..7699	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 7470..7699 +
1622816727.2551565-CDS-L-elsbetiae_contig6583:8666..8940	1622816727.2551565-CDS-L-elsbetiae_contig6583:8666..8940	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 8667..8940 +
1691683768.956681-CDS-L-elsbetiae_contig6583:8666..8940	1691683768.956681-CDS-L-elsbetiae_contig6583:8666..8940	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6583 8667..8940 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6583.15287.1	prot_L-elsbetiae_contig6583.15287.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig6583 3691..8940 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig6583:3648..10072+
coding sequence from alignment at L-elsbetiae_contig6583:3648..10072+

protein sequence of mRNA_L-elsbetiae_contig6583.15287.1

>prot_L-elsbetiae_contig6583.15287.1 ID=prot_L-elsbetiae_contig6583.15287.1|Name=mRNA_L-elsbetiae_contig6583.15287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=265bp
MVTLCWTSRDLEGFIKTIKFIEQSASNMLAITNLAISVNLALIILSHRTV
SRVKSVSSPPLILMFLAISMGIASVSIPFWELILVLGTSFWLTSTNEAEY
HFINVSMFYVEFLVGICMFAIVAWLLLCRKREVKECWKVHRRIRYYFGLT
ALGTAVNLSLGICGTTFVLTNESQPLLLIWSWIFRYMHIALDTIVLYGVL
GERERIMDERGDGARSESDLVVLSSGQTKPSTRQLRPAQRAGNSRGSRVT
NNTNSKPVASAPLM*

mRNA from alignment at L-elsbetiae_contig6583:3648..10072+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig6583.15287.1 ID=mRNA_L-elsbetiae_contig6583.15287.1|Name=mRNA_L-elsbetiae_contig6583.15287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6425bp|location=Sequence derived from alignment at L-elsbetiae_contig6583:3648..10072+ (Laminarionema elsbetiae ELsaHSoW15)
CAGCGGGTTGGTGTTGGGCGTCTGCTTCACCCTGGAGAATGTAATGGTCA
CCCTTTGTTGGACCTCACGAGGTGAGCTGCCGACGACGCCATTTGTATCG
GTTACGCCACTCAGCCACACTAGTAAAAAGGATAGCCATTTTCCAGAGTT
GGAGCTTGAGAGAAGGAGCCCCTTGGTGCCCCTCTTTTTTCTCTGGAGCT
TGCCTCCTTGACGCTGAGAGGAGGGCCCCTTGGTGCCCCCCTCTGTCTTA
TGGGACTACCTTCGCGAGAAAAAACGGGGAATATTGGTTTATATGTGAAA
TAGAGTAGTAGGGGTTCTGAAACCCTAACCCTAACCACCGACCCCCCAAA
CATTCCCCGATTCCATACTTTATCCCATATGTTTCGCTGAACAAAAACCT
GCGTAGACTACCTGTCTTTTGTCCGTGGGGGACCTCCTCGACCTTCCGTG
CCCCTCTCCGGAAGTTTTGCTTTTGAGTTTGTGGAGTTTTTCTGTGGCCT
TGAGCCTTGCGATGGACCCAGATCCATCAGCAGCAGCAGCAGCAAAAGTG
TAAGTCCAGTCGCCCAACTGAGGTTTTGTTCCGATTTTGGTCGTTGAGGC
GGTTGGGCAGAACGCGGCGCGTTTTACCTCACGGGTGTGATGATGTCAGG
TTTCCGCCGGACGTACCTAGGCGAAGTTGTTGGGTGTGTTTTGCGCCCCC
ACCCCCATAACGTATTCCTTAGGTTGGTGTCTATGCTTGCCCTGCGTAGC
TGCACCTCCGTATTGCACCCATCCGATCGATTGGTGTCTGTATTTGCCTT
GCCCAGACTTGGAGGGCTTCATCAAGACTATCAAGTTTATCGAGCAATCA
GCGTCTAACATGCTGGCCATCACCAACCTCGCCATCAGCGTCAACCTTGC
CCTCATCATCCTGGTGAGCAACAAAGGCAGCGTTGTTGGGTCCGCAATTC
TAGGAACTTGATCGACATCTGCATCAGGAGGAGGGGGAAGGTACCACTAA
GGCACTACTTTAACGCTCATCTTGTGCTGCCCTGCTTTGTGACTTGCTGT
GCAACTGAGGGACCAGTTAGTCGAATCTGAACCACCATTTCAATGCTGGT
GCAATGCGAGTGCTGCCCACGTAATTTGCCGTGTTTTGCGTATGAACTGC
TTGTTTGCCGGCATAGTACTGCTGCCGCGCGCACCACCACACCCTCATGA
TCCATTGTCACGGCAGCGGGCACTTCGTCGGAGTATAAAGATGGGGCGTG
TGCACATCAGTGTTGAGTGCCGAGCCTGCAAGTTCAGCGGTTGACTGGAC
TAATGTTGCCGAAAGTACAGGCACCTCCTGATTCACCTCGTCTCGACGAA
CTTCTTCGAAAAGTACTCCTGTAGACACCACGCAGCGTTTAGCCCCTTGT
AGTGGGTATGTAGCCATGATAGAGTCATCACCAAAGTGTAATTTACCATA
TGCATTTACTCATCTATAGCGTACCCACCTACGCCGTTTGCTCTTGCCTC
CGGCGGCGTTGCGCGTCGCGTCATCTGCTGTCTTGCGGTGACCCCTTAAT
GACTTGGATGATGGTGGCACCCGTGGCGAACAGTCTCACCGGACAGTGAG
CCGTGTCAAGAGCGTCAGCTCGCCCCCGCTGATCCTGATGTTCCTGGCGA
TCTCTATGGGCATAGCGTCGGTCTCTATTCCTTTCTGGGAGTTAATTCTT
GTCCTGGGGACCAGCTTTTGGCTCACCAGCACTAACGAGGTAATTTTTTT
CTAGGAGTTCTAACATTATCTTTTGTCTCCCCGTTCGTTATTCCAAGAAA
ATTATCCGGGCTCTCGCACGCGTTCTGTCAGGCCACGTCACTTTTTCACT
TGAATTTAGACTGGATATTCATGGGTCTGAAAGCTCTCCATGCCTGGTGT
GCCGGTTCACGTACGTTTGTTTTTCGTGATTTGTTCAATGGGAGAGCGTT
TCGATCGATCGGGGTTGCTCCATGGTGCTCTCTACTTCGAGCCCATTGCC
CTCTGTCTGTCTGTCTGTCTGTCTCCTTTCTCTTTTCCGGCTGCATGCCG
CTGGGCGACGCATTCCGCTTCTCGCTGGCTGTATGTGCGGTTCGAACACG
TTGGACGAGTGCGTGTCAATGTATACGCATGCGTTTTATACGCGGCGCGC
GTTCATTTCCCGGTTCTAGGGAGGTCGTTTCGATCGATCAGGGTTGCTCC
ACGGTGCCCTCCACCTCGAGACCATTGCTCTCTGTATCTCTCTTTGCCTC
TATCTGTCTCTCTTTTCTCTCTTTCGCTGGGGTGACTGACATACTACTGT
CTCGCTGGCTCTATCATCGGTTCCAAGAGGCGAGCTCGGGTTGTTGGCGT
GAGGCATGATGCGAGTTTCATTCGGTAGTAACTTCACTCCCAGCCCACAT
CGCCGTGTGCTTTCTACGTCTCTGTGTGTGCCGTGTGCTCTCAACATCTC
TGTGTGCGCCATGCTGTCTTCTTTTCTCTGGGAAGTTCACTTCACTCCCA
GCCCATCGTTCTCTACGTCTGTGTGTGTGTCATGTTGCCTTCTCTTCTGC
TCTCTGTTTCTTTTTTGCCCCGGGTGGAGTTACGGTTAATGAGGAATGCG
GTTCTTTTTTTGCGGCTTGCTCCCGTTGAATGTATACCATGGCCCATACG
TGATGAGCGGGGTTATTTTTTTGCGGCTTGCTCCCGTTGAATGTATACCA
TGACCCATACGTGATGAGCGGGGTTATTTTTTTGTGCACGTTGTGCCCGG
AGTTGTTATGCTGTTGTCTTTCAGGTATACACATTTTTCACGCAGGCACG
CACGGAGGTTATTGGAATGCGGTGCTTTTGTGCAGCTCCGTTCGAATGTT
CATGGCATATATGTACGTACCATGCGTGTTTTCGGTTCCTCTTGGTCGAT
TAATTCAGTGCATATCTCTGCATACTTTAGACATGTAGACTAGACTAGAT
ACAAGTATATACATAGAGAGATATATGGCGTTTGAAGGCTGGTTGGCGTT
TTTTACGGCTTACCGTTCTCTCTGAGCAGCACTCGGTGTGCAAGGTGTTT
GCGATACTTACCTTTACATTCTCTAGACAACATTCCAGGTACACACCCAT
GCATTTGAGTCACGTCAATCTCACGCATGTCAACACATCCACATCTCATC
ATGCATCTTGGGACTCGCGAAGTTAGCGTGGCGGCGTAAGCCGCCGAAAA
ACTTGTTTTTTTATCTCTTTATTGATGCGCCACACACGTAGTCTATTGTG
CATTTCGTTTCGTGCCACCTGAACAACACTCCGCGCGCGGCATTTGCGTT
GACGTCTGTCCCATGTATACAACTGCTGTTAGTGTGCTGCTGAACGCATC
TCACCTTTCACGCATGCACTGGCTGGCCTGTGTGCTGTATCCTTTCTCCT
AATTGTATCGGAGTCAGATATATGGTTTGACGAGGTTTCATGAGATGAAC
GAATACCCACCAGGCCGCCGCTGAAGCGGTCTGGTTCAGCTGCACGCACA
CCACACAAGTGAAGACAAGAGTCCCCGCGAGGCACCCGCGTATTTATTGT
GAGCTCTATGTAGGAGAAGGAGCTTGGCCGACCCACCCCAACAATATCGC
TGTGCCCCTCTCCCCACTACCAGCCTCCCATACACGGAGTACCGCGCAGT
ACGCCGGGTTGAATTTTGTGTCAAATCGCGCCTTGGCGGCCTTGACGTGT
ACCGCTGTGCGGTGCGGTGCCGTCCGTGGATGCGCTCTATGTGTTCTGTT
TTGCACGGAAGCCCTAACTCGGGTTGTTCCACATTCCACATCGATGCGGT
GTCGTTTTTCTTTCATGAGCAGGCAGAATACCATTTCATCAATGTGTCCA
TGTTCTACGTCGAGTTCCTCGTGGGGATCTGCATGTTCGCCATCGTGGCC
TGGCTGCTGCTATGCCGGAAGAGAGAGGTGAAGGAGTGCTGGAAAGTGCA
CCGCCGCATCCGCTACTATTTCGGCCTCACTGCCCTTGGCACGGCTGTGA
ACCTGAGCCTCGGCATTTGCGGCACGACTTTCGTCCTCACCAATGAGTCG
CAGTGAGTGCAGACAGGGTGAACGCTTCCGTATGACATATCGGATGGGCT
GGCTATGCTGCATTTGTCCGGGGGAGGTTTGTTGAGCGGCATAGGGCGAA
CGCGGCATGGCATGGCATAGCCTAGCCTAGGGTTACCTTTGCACCTTGCA
TGATCGTAGACAAGTTTAGTTACCGGTGGCGCCAGCCACCCTGGGGTGGC
GCGGTCATCCCCCCCCCCACATTATAACTCCGAGTTTCACAACCAACCTT
CTCTATATTGGTAGTTTCGGAGGAGAGTGCGCAGCAGGCAGTCTCCTTTC
TGATCCAGCCAAGCAAGTGGGAATCAAACTTGCGATGATACATACATACT
CCGTGCTTGGTGGTAGGGTTGCTGTTTGCACGTGCCTTCCCCCCCAAAAC
ATCAACAGATGCGAAATCGCATCTCCTAGAACGAAATTGTGCCCAGGATA
GAAACAAACCACTCGATTACAACGCCTACTGTGTGTACCCTCGCAAAGGT
ATGAATTACGACTGGGGTCAATAGACAACAATTAAAAAAATGGTTTGTCG
CGCTATACGCGCGCCGCTTGGCTTGCTCAATAGCCACCGGTATTCGCACG
CTTGCTGAACTTGTTTGGCGGCCTCAAACCACACTTTAGGAAGACCGCTT
GTCCGGCATGTTTTTCGTTCGAGGCGAAGGAGACCCGCTGCATCAATATA
CCGCTACTTTTCAGAGAGTGTCCTCTTGGTGGAACTGCGGCGAATCGGCG
TTCTTGCTACGGCTGTGCTGCAAAGCACCCACACCCAGTGCGATTTATGC
TCACCGGCGTATAGATGCAATGCCGGGCTGATATTTTCCCGAAACGCTTT
GGTTGGTTTTCCATCGTTATGTAGTTTATGTAAGTTTTAAACAATTGTCC
CCCCCCCCCTCCGCCCGCACACGCGCTCGCCTCGCCTGTTTTGCTCTGGC
ACGATTTTGATGATTTCAGACCGCTCCTACTTATATGGAGCTGGATCTTC
CGGTACATGCACATTGCTTTGGACACCATTGTCTTGTACGGCGTGCTAGG
AGAGAGGGAGAGGATCATGGACGAACGCGGCGATGGCGCGAGATCGGAAT
CGGATCTTGTTGTGTTGTCGTCCGGACAAACCAAGCCATCAACTCGACAA
CTCAGGCCCGCGCAACGCGCCGGCAACAGTAGAGGGTCTAGAGTGACCAA
CAACACGAATAGCAAGCCCGTCGCAAGCGCGCCCCTGATGTAGTCGGAAT
TCATACCCATCACCCGGAATACAAGATTCACCACACGGCGGTTACACTTA
GGCCCCGGGTCTGCTGTCGGCGGGCGAGCAACAGGTTTGGCTGAAAAAAG
GATGCGCATTATTCGAAAGGCGTGCCAGCACCCTTTACGACGAGGCGAAG
AAGCGGCGGGAGTGCGAGTTCTCCTCGTCTCACGGTCGTGTTGCGTGCGT
ATGTATGTATGCATGTCTGCTTTGGTGTGCGCGATGGTTGTTTTGCACAG
CACCGGACCTCTGGTCTTGTCTTCACGAGGGGAGTTTGATGGGTGCGGTT
CGTTTTTGTTTTTGTTTTTTTCCACTATTGTTGGCTTATTCGTCGTCTGC
CTCACTGGCCCCCTTACTTTACTACGATTAGCTGGACGATTGAAAGAAAG
AACGTGCACGACAACAAAAGGTCAAAGCATTATCTGTGTTCGGTGTTGGC
CTTCTTCGTGTGTAGTTATGCTAGGTGGGGTCTTGGGTGGGAGCCCATCT
GTATGCTGATGCAGGGGCTTGTCCTTATCCCCTGGTTGCTGTAGATTATC
CTTGGGTCCCCGTTCTTGTCTATTGCCCTGTCGGTTTTGGCGGATGTTTC
CCTGAATCGGTTGGTCTGCGTAGCGTGTTTTCCCCTAGCGCTGTTGATGT
TGTGGTCGTCGCATTGAACTGTGTGCGGGTTTGGAATGTTGAATGCTGGT
ATCTTACGTACACGAGCGTTGTGTCTGTGTAGGGCGTATAAATGCAGCCA
ATCGCACGTTCTACGGTCATTTACGAATGCGACTGGTGGGTGTAAGCTTA
GGGGTCGAGGTAGGAATCCTTTCATGATTGTAGATATTATATGTGACTTA
AAGGTGCGGATATACATTGGTTATCATATATTCCTTTATGTATGTGCTCC
TTCCGTGCGCAACATTGATATAAATTGTCGTACATTTGCACCCGGTGATG
ACGTCATCAATACAGGCAGGCGCCTTCGCCTGTCTAGCGTACAATACAGT
ACGAATTATATGTTTATGGGGATTATGAACGAACCATTTCCGGCTTAGGC
TCTCTGAAAATGTTTCCACACAGTTTCGATAGGTAACACGGATTATATAC
GAACTTGATTTTTTGTTTATTTGGC

Coding sequence (CDS) from alignment at L-elsbetiae_contig6583:3648..10072+

>mRNA_L-elsbetiae_contig6583.15287.1 ID=mRNA_L-elsbetiae_contig6583.15287.1|Name=mRNA_L-elsbetiae_contig6583.15287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1590bp|location=Sequence derived from alignment at L-elsbetiae_contig6583:3648..10072+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCACCCTTTGTTGGACCTCACGAGATGGTCACCCTTTGTTGGACCT
CACGAGACTTGGAGGGCTTCATCAAGACTATCAAGTTTATCGAGCAATCA
GCGTCTAACATGCTGGCCATCACCAACCTCGCCATCAGCGTCAACCTTGC
CCTCATCATCCTGACTTGGAGGGCTTCATCAAGACTATCAAGTTTATCGA
GCAATCAGCGTCTAACATGCTGGCCATCACCAACCTCGCCATCAGCGTCA
ACCTTGCCCTCATCATCCTGTCTCACCGGACAGTGAGCCGTGTCAAGAGC
GTCAGCTCGCCCCCGCTGATCCTGATGTTCCTGGCGATCTCTATGGGCAT
AGCGTCGGTCTCTATTCCTTTCTGGGAGTTAATTCTTGTCCTGGGGACCA
GCTTTTGGCTCACCAGCACTAACGAGTCTCACCGGACAGTGAGCCGTGTC
AAGAGCGTCAGCTCGCCCCCGCTGATCCTGATGTTCCTGGCGATCTCTAT
GGGCATAGCGTCGGTCTCTATTCCTTTCTGGGAGTTAATTCTTGTCCTGG
GGACCAGCTTTTGGCTCACCAGCACTAACGAGGCAGAATACCATTTCATC
AATGTGTCCATGTTCTACGTCGAGTTCCTCGTGGGGATCTGCATGTTCGC
CATCGTGGCCTGGCTGCTGCTATGCCGGAAGAGAGAGGTGAAGGAGTGCT
GGAAAGTGCACCGCCGCATCCGCTACTATTTCGGCCTCACTGCCCTTGGC
ACGGCTGTGAACCTGAGCCTCGGCATTTGCGGCACGACTTTCGTCCTCAC
CAATGAGTCGCAGCAGAATACCATTTCATCAATGTGTCCATGTTCTACGT
CGAGTTCCTCGTGGGGATCTGCATGTTCGCCATCGTGGCCTGGCTGCTGC
TATGCCGGAAGAGAGAGGTGAAGGAGTGCTGGAAAGTGCACCGCCGCATC
CGCTACTATTTCGGCCTCACTGCCCTTGGCACGGCTGTGAACCTGAGCCT
CGGCATTTGCGGCACGACTTTCGTCCTCACCAATGAGTCGCAACCGCTCC
TACTTATATGGAGCTGGATCTTCCGGTACATGCACATTGCTTTGGACACC
ATTGTCTTGTACGGCGTGCTAGGAGAGAGGGAGAGGATCATGGACGAACG
CGGCGATGGCGCGAGATCGGAATCGGATCTTGTTGTGTTGTCGTCCGGAC
AAACCAAGCCATCAACTCGACAACTCAGGCCCGCGCAACGCGCCGGCAAC
AGTAGAGGGTCTAGAGTGACCAACAACACGAATAGCAAGCCCGTCGCAAG
CGCGCCCCTGATGTAGACCGCTCCTACTTATATGGAGCTGGATCTTCCGG
TACATGCACATTGCTTTGGACACCATTGTCTTGTACGGCGTGCTAGGAGA
GAGGGAGAGGATCATGGACGAACGCGGCGATGGCGCGAGATCGGAATCGG
ATCTTGTTGTGTTGTCGTCCGGACAAACCAAGCCATCAACTCGACAACTC
AGGCCCGCGCAACGCGCCGGCAACAGTAGAGGGTCTAGAGTGACCAACAA
CACGAATAGCAAGCCCGTCGCAAGCGCGCCCCTGATGTAG