mRNA_L-elsbetiae_contig6580.15285.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6580.15285.1
Unique NamemRNA_L-elsbetiae_contig6580.15285.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A6H5L7M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M1_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 8.090e-84
Identity = 182/213 (85.45%), Postives = 186/213 (87.32%), Query Frame = 1
Query:   58 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVA-------RCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVA 675
            MADSKR RISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADK DK+ GTG+A K       XXXXXXXXXXXXXXXXX            RCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIE+LEEERE+ S KVY LEEELR VA
Sbjct:    1 MADSKRARISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGTGAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREMHSTKVYALEEELRLVA 213          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: D7FZA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA5_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 9.020e-81
Identity = 181/216 (83.80%), Postives = 186/216 (86.11%), Query Frame = 1
Query:   58 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVAR--------CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASK 681
            MADSKRVRISKREGALMARLSAKEQE+YEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADK DK+ G G+A         XXXXXXXXXXXXXXXXX              CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIE+LEEEREV S KVY LEEELR VAS+
Sbjct:    1 MADSKRVRISKREGALMARLSAKEQEIYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGKGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRLVASQ 216          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A836CAD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.450e-12
Identity = 39/80 (48.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   64 DSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAEL 303
            + K+ R++ REGA+M RL+AK+ ++ ++Q+   DL  ++ P  DF RQ +TDPA+NVEFQL+ +QL EME  LR  EA+L
Sbjct:    5 EPKKARLTAREGAMMMRLAAKDADMADMQSYVVDLAVSKTPSVDFTRQHFTDPAVNVEFQLMRSQLVEMEKKLRTAEAQL 84          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A7S3ERR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ERR7_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 1.100e-8
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1
Query:   52 ELMADSKRVRIS-----KREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRS 669
            EL A  +R ++      +RE AL+ RL+ KE+E  E+Q   R+L +A RP T    ++  DPA+N E   L  Q+         KEA+  E     + +  +  +GS      GK                     L+ +C+ L+ ENE+L        V +L +E A+ + YA ELK AL E  E++EQ+ EE +V  + +  L  E  S
Sbjct:   29 ELRATERRSQLEVAQQRRRESALLLRLALKEREARELQTQVRELRQAMRPATSQVSKLLLDPAVNAEIMQLRQQV---------KEAQAMEHAAKQELEANQFQSGSIA----GKK--------------------LIQKCKELQAENEQLGKDLSEGSVQKLKTEAALQKEYAQELKKALLETREWVEQMHEELDVSQSMIIQLRRERNS 206          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: UPI0015919C08 (pre-mRNA-splicing regulator WTAP n=2 Tax=Bifurcata TaxID=1329961 RepID=UPI0015919C08)

HSP 1 Score: 62.4 bits (150), Expect = 5.780e-7
Identity = 56/203 (27.59%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRHY 693
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++L+    +   Y
Sbjct:   70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLVQY 239          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A6A4RW61_SCOMX (Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4RW61_SCOMX)

HSP 1 Score: 62.8 bits (151), Expect = 7.380e-7
Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRH 690
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++L+    +  H
Sbjct:   94 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLSH 262          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A8D3B3T0_SCOMX (Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3B3T0_SCOMX)

HSP 1 Score: 62.8 bits (151), Expect = 7.500e-7
Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRH 690
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++L+    +  H
Sbjct:  163 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLSH 331          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A556TT27_BAGYA (Pre-mRNA-splicing regulator WTAP n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TT27_BAGYA)

HSP 1 Score: 62.0 bits (149), Expect = 8.210e-7
Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++LR  
Sbjct:   70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 232          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: FL2D_DANRE (Pre-mRNA-splicing regulator WTAP n=8 Tax=Cyprinoidei TaxID=30727 RepID=FL2D_DANRE)

HSP 1 Score: 62.0 bits (149), Expect = 8.290e-7
Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++LR  
Sbjct:   70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 232          
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A2D0PZM5_ICTPU (Pre-mRNA-splicing regulator WTAP n=11 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0PZM5_ICTPU)

HSP 1 Score: 62.0 bits (149), Expect = 8.380e-7
Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query:   85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
            ++RE  L+ RL+ KEQE+ E     + L + ++P     R    DPAIN+ F  + A+L + ++ L   + EL   + T                PD + G                   L+A+C+ L QEN+EL       ++AQL +E A+ + Y+ ELK++ +E  ++I QL+EE E   + +  L+++LR  
Sbjct:   76 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 238          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7M1_9PHAE8.090e-8485.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA5_ECTSI9.020e-8183.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAD3_9STRA4.450e-1248.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ERR7_9EUKA1.100e-830.33Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
UPI0015919C085.780e-727.59pre-mRNA-splicing regulator WTAP n=2 Tax=Bifurcata... [more]
A0A6A4RW61_SCOMX7.380e-727.72Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthal... [more]
A0A8D3B3T0_SCOMX7.500e-727.72Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthal... [more]
A0A556TT27_BAGYA8.210e-728.57Pre-mRNA-splicing regulator WTAP n=1 Tax=Bagarius ... [more]
FL2D_DANRE8.290e-728.57Pre-mRNA-splicing regulator WTAP n=8 Tax=Cyprinoid... [more]
A0A2D0PZM5_ICTPU8.380e-728.57Pre-mRNA-splicing regulator WTAP n=11 Tax=Siluroid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6580contigL-elsbetiae_contig6580:3730..10452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score272.3
Seed ortholog evalue3.5e-70
Seed eggNOG ortholog2880.D7FZA5
Preferred nameWTAP
KEGG rclassRC00004,RC00326
KEGG koko:K00626
KEGG ReactionR00238,R01177
KEGG Pathwayko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020
KEGG ModuleM00088,M00095,M00373,M00374,M00375
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000381,GO:0001510,GO:0001654,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005911,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007423,GO:0007530,GO:0007538,GO:0007539,GO:0007542,GO:0008150,GO:0008152,GO:0008380,GO:0009451,GO:0009506,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010073,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016556,GO:0016604,GO:0016607,GO:0018992,GO:0018993,GO:0019099,GO:0019219,GO:0019222,GO:0022414,GO:0030054,GO:0030237,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034401,GO:0034641,GO:0034708,GO:0036396,GO:0040029,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043484,GO:0043621,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045293,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048024,GO:0048507,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048749,GO:0048856,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055044,GO:0060255,GO:0065007,GO:0070013,GO:0070828,GO:0070868,GO:0071704,GO:0071840,GO:0080009,GO:0080090,GO:0090304,GO:0097549,GO:1901360,GO:1902494,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA methylation
EggNOG OGsKOG2991@1,KOG2991@2759
EC2.3.1.9
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-19_000190.1
Exons7
Model size1239
Cds size1182
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6580.15285.1prot_L-elsbetiae_contig6580.15285.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6580 3730..10395 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816726.9626455-CDS-L-elsbetiae_contig6580:3729..43481622816726.9626455-CDS-L-elsbetiae_contig6580:3729..4348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 3730..4348 -
1691683768.757817-CDS-L-elsbetiae_contig6580:3729..43481691683768.757817-CDS-L-elsbetiae_contig6580:3729..4348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 3730..4348 -
1622816726.9759555-CDS-L-elsbetiae_contig6580:5906..60121622816726.9759555-CDS-L-elsbetiae_contig6580:5906..6012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 5907..6012 -
1691683768.77117-CDS-L-elsbetiae_contig6580:5906..60121691683768.77117-CDS-L-elsbetiae_contig6580:5906..6012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 5907..6012 -
1622816726.9906466-CDS-L-elsbetiae_contig6580:6908..70831622816726.9906466-CDS-L-elsbetiae_contig6580:6908..7083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 6909..7083 -
1691683768.7839274-CDS-L-elsbetiae_contig6580:6908..70831691683768.7839274-CDS-L-elsbetiae_contig6580:6908..7083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 6909..7083 -
1622816727.002885-CDS-L-elsbetiae_contig6580:8022..80921622816727.002885-CDS-L-elsbetiae_contig6580:8022..8092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 8023..8092 -
1691683768.7951267-CDS-L-elsbetiae_contig6580:8022..80921691683768.7951267-CDS-L-elsbetiae_contig6580:8022..8092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 8023..8092 -
1622816727.0241363-CDS-L-elsbetiae_contig6580:8291..83781622816727.0241363-CDS-L-elsbetiae_contig6580:8291..8378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 8292..8378 -
1691683768.807273-CDS-L-elsbetiae_contig6580:8291..83781691683768.807273-CDS-L-elsbetiae_contig6580:8291..8378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 8292..8378 -
1622816727.0350633-CDS-L-elsbetiae_contig6580:9501..95781622816727.0350633-CDS-L-elsbetiae_contig6580:9501..9578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 9502..9578 -
1691683768.8204274-CDS-L-elsbetiae_contig6580:9501..95781691683768.8204274-CDS-L-elsbetiae_contig6580:9501..9578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 9502..9578 -
1622816727.0480092-CDS-L-elsbetiae_contig6580:10347..103951622816727.0480092-CDS-L-elsbetiae_contig6580:10347..10395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 10348..10395 -
1691683768.8302336-CDS-L-elsbetiae_contig6580:10347..103951691683768.8302336-CDS-L-elsbetiae_contig6580:10347..10395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6580 10348..10395 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816727.0596757-UTR-L-elsbetiae_contig6580:10395..104521622816727.0596757-UTR-L-elsbetiae_contig6580:10395..10452Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6580 10396..10452 -
1691683768.8402677-UTR-L-elsbetiae_contig6580:10395..104521691683768.8402677-UTR-L-elsbetiae_contig6580:10395..10452Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6580 10396..10452 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6580.15285.1

>prot_L-elsbetiae_contig6580.15285.1 ID=prot_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=394bp
MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQ
VYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGS
AVKGPDGKAGAGSGAAGASGESTAARASALVARCQRLEQENEELAASADV
AKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEE
ELRSVASKRRHYEDQQQQQQQQQQQQQQQQQQGNPSWGEDAHDQHEHQQH
QHPHHGGEGHHEGGEEVGKRDSSSRPGSNSSSGYRDRDPDAPPPPPPEAE
AEVEADTAPPGDGDDMDDLYGDMNMDAIGGTFLPDEGGGQAGQEDLVVKD
DPMQQEEEEEEEEEEEEEQEKMEDTPPPPARGRNTRRSTRSRK*
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mRNA from alignment at L-elsbetiae_contig6580:3730..10452-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6580.15285.1 ID=mRNA_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6723bp|location=Sequence derived from alignment at L-elsbetiae_contig6580:3730..10452- (Laminarionema elsbetiae ELsaHSoW15)
GCGGCAACCTAACTTCTGGTCTGTGCGCAGCCACAACAGTCAGGAGCCGG CGAACTCATGGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAG CCCTGGTGAGGAAAATCGGTATATTGTAGCGTATGTACAAGTCCTCTCAC CTCCCGCGACGGTACATACCGTAGGTGACACAATATACCACACCCCCTGG ACCGACTTTTAGAGCTTCATTACTCCGTAGCGAAGAGGGTGTCAGCACCA AGCAACACCTTTTCGGGCAGACTTCGATTATATATTTCCAACGCCATCTC TTTCGGCACTGGCACTCCTCTTGCTGGGGAGGAATCGAGCTTTGAAAAAC TGTCCAGGGGGGGGGGGGGTGGTATCTTGTGCCATGCTCGCGATCCACGG CTCCCTCCCACGCTCTGTGTTTCAATTGTTGCCTGTGGGTGTAATCTATT GATGGCCGGTGTGGGAAAATACCCATGCCAAGAACCAACGCCAGCGCAGA AATCGGCTTTGCTAGTTTTTTCGGGGTGGGGACAGAAACAGCAGTGAAAC AGTTTAGTTTCCGGAGAAGGAGCGCGGGAGATCCGATCTCCCCTCTTGTT GTCAGACCTACTGTAGGTGTAGATAGTGCTGCAGTCTCTGTCGGTGTAAA ATGTATTACACACGATCAAGTCGACTGATATCCTCCCTTCTCCTCGTACC ATGTATGCAGGTGAGGTGCGTGAGTAAATATACAGTTGTGTACGAATAGT AAACAGCAGGTTATAGAGCACGGTGTAGACTATACACACAACAACAACGC TCTTTCACGTTTCGACCCCAAGTCATGTAGACTTGGCAACAACCTTGCAA TGTGTCGGTGTTGGTTTGATTCAGATGGCACGGCTGTCGGCGAAGGAGCA GGAGGTGTACGAGGTGCAGGCATCGGCCCGGGATCTCTACAGAGCCAGAA GGTGTGCACTTGAATTTCCTCTCCATACAAATTACAGCAGGACCGTAGTG CAGCAGCATTACATACCAGTACTACCGTACCTCAAGTTGCATCGGTTTTG TCTCTACGGTTTTCAACCTGTGGGTGGGGTCGCACTAGATATTCACCTCT CTGACTCGTGTGGCGATCACGTCGTGTTGAAATCCACATGTGTACAGCTT GCTTTGCGTGTCGTAGGTGACACAAGATATCACCCCCCCTCGACCGACTT TTAGAGCTCCATTTACTCCGTAACGAAGAGGGTGCCAGCACCAACCGACA TATTTTCGGACAGCCCTCGACTAGGTCTTTTCAACGCCCCCCTATTTCGG CACTGACACTCTTCTTGCTGGGGAGGGATTGAGCTTTGAAAATCTGTCCA GGGGGGGTGGCATCTTGTGTCAACTACGGTAGGCTTATCTCGCACATGCA TTTAGATACTTGCTGGGGGTTTGGTCATGTGATCAAGTCCTTGAAGGGGG GGTGAAGGAGGGGTTACCTCACCCGCTACCTCCTTGCGCCTTAGACCTTT GAAGACTATCGCAGGTTGTACATCTTCCGTGGCACAACCAACTAGCGAAT ACTATTAGATTTAGTTTCGGCCAAAACAGGTGAACGGTTAGATGAGAAAC AACAAGCAGTCTGCGCAGTTTAAACATGGATGGGTCGCGTGTCAGAAAAG ACGCGACCGTTTGTATGATGCCTGCTTGGGACCGTCGGTTCAAAATAGTA CTTGTTGGCCGACCTCGCACATCTTTGCAGGGGTGATGTTGAACTCTTCT GATATTTTGGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCACTGT ATGGAATACCGTTTGAACCCCATATCGAGTCCTTGCTCTAGTGTGGAGTA GGTTCCATCTTTGATTCATTGATTATTTTTATAAAGTTGTGGGGGTGTAC ACCAACCACTCAGCCGCGCATCGACGCGTGTGCCAACACCACGGACAGGT GTTGCCACAGCAGCAGCAGCAGCAGCCACTGTACCTGGTCTACTCAAATT TTCTACCCCGCCCTGGTCTCACGTCTCTGCTTCCCTTGTGCCGGCCACCA TCGTGCCTGTACATTATTACACAGGCCAGTGACAGATTTCGCGCGGCAAG TGTACACGGATCCTGCCATCAACGTAGAGTTTCAGCTTCTGACCGCGCAG CTAGCCGAAATGTGAGTTGCGAAGTCTCCTTCTCTCGCCACTTCCTTGCT TTTTTTCTGAGCACCTCATGAGCACCGGAGACAAGCTGTACCGTGCCGCT TTCCGTCTAGGCGCTTTTGCTTCGATTGACTGCATGGCGCTGCCTTCGCT CCATTTGTTGCACGGCAGTTATCTTCAAAGGTTGGTGTTGGTTTAATTAT CTGATAACAGGGAAAATTCGTTACGGCTGAAAGAGGCGGAGCTGAAGGAG CTTCGCACGACAGCCGACAAGAAGGACAAGGTGTGTGTGTGTGAGCGTGA GCGTGAGTAAGACCGTAGACCACATCGGTATCCGGTAATCTACGCAGGTT TTTGTTCGGCGAAACATATGGGATAAAGTATGGAATCGGGGAATATTTGG GCTGTCGGTGGTTAGGGTTAGGGTTAGGGTTACGGAACCCCTACCACCCT ATTTCACATATAAATCAATATCCCCCGTTTTTTCTCGTGAAGGCAGTCCT CGGTATTCGGTATCGTCCCCATGGATAAATTAGGTATTCAGTCGAATTAA GTGTTGGAATAGGATGCACACAGGGAGGTACTGAGTGGAGACATCGGAAC GGTTTTTAATGTGAAGAAACAGCAATTCGAGACAGCTCGCCATGTATATG GCGGCTGTTCTCGCTGTGGTATTTTTTCTTCTTTTTTTCTTTTTTTTCTT GTTCACGTTTATTTCCAGTGCTCGATGGGCTCCCTGTCGCGAGGACATCT TGCCAGAGTATTGAACCGTGGTCACACAGAAGGGTTCCTTTCCCCAAGGC CCCCACTCCCCCCGTCTGCGGTGGTTGCCTGAGATTTTTTTCGCGAGAAG GGTTCAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTTGAAGT TTTGGCCTTGATCAAATGCCGAGTCGCGCTGCAGGGCCGTCACCCAGGGT ACGCGGGTGCAGTGGTTTGATGTCGTGACGTGCGTGCACGATGCTTGCGT TTGCGGTGCGATGCGAACGTTCTCTGTCCTGCTTGTCGTGCGTGTGGCTG GCTGTCTTATCTACGTTCGATTCCAGCGATGCCCAGGCCCCGTACGAGCT TTCCCCAACACCGCCCCGCTGTGGAGGCAAATCACGGCTAGCTCCAATTG TTTCTTTATACTGCTGTTGTTGCCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCATCCAGGAAACGGGGACAGGGTCTGCGGTCAAGGGAC CCGACGGCAAAGCCGGCGCAGGAAGCGGCGCCGCCGGCGCTAGCGGAGAG AGCACGGCGGCGAGGGCGTCTGCTCTGGTGGCTCGATGTCAGCGGCTGGA GCAGGAAAACGAGGAGCTCGCCGCGTCTGCCGACGTTGCCAAAGGTGCTT TAGTCGTTTGCTGTTTTTGGTGGTGGTGGTGTCTGGGATACTCGATTATT TATCTTGTTTGTTTTTTCTCGTCTTTCCGTTCTTTGTTCCCCTTGTCGTC TGGTGTAGAGTGAGGCTTGAATCATTCGTGTGGTGCGCTTTGTCGGAGAA CCTTCTGGTATATTTGTGTTTTTTCGTGTGTGTTAGTTCAGTCTCCGCCG TCGTTGTTGTTGTTGTGCTGTCTTTCTTAAAAAATAAACAATGAATCAAA GATGGAACCTACCCCACACTAGAGCAAGGACTCCATATGGGGTTCAAACG GTATTCCATACAGAGACGTAATGTTTGGCGAAGCGAGCAGAAAAACAACC TAAACTATCAGAAGAGTTCAACATCCCCCCTGCAAAGGTTGTAAGATTTG CGAGGTCGGCTAACAATTATTCAGGCTGTCTTTATTGTCTCTCTAGCTGC CGAATTAACGAGACAACGACAATGGTATAGTCTATGCGCGCAAGAAGCCA AGCCGTCCAGCATTGAGAGGCTCATGGTGTCACGGTGTCAAGCTCGGGCT TAATTTGTCATATGCGCCCTTTTCTGCCGTGTCCGGTCCTGTCATGTTAG CAAGCGCCATCACATCGCCGTTACGGTCGTGCCCAGTAGTGTGAGTTGCA TAACCCTGCAGCTGCTTCTATCAGCGCGATGTACGAACGGCATGTCCGAG CCGAGACACCAGAAGACGAACCCTAACCTTTCTGCCGCGTTCTTCGAGTT GACCCGTATCGATACCCATGCCCATTCCCGTACCCGTGTTGTAACCGCTG CTGGTTGCTTTCGTTGCCGTTGCCGGGCTGGTTCCCTTGCACCGCCTTGC ATACCACCGCACCACCACCACCACCACCACGCCGGTGCAGTGGCACAGCT CACAAGCGAAAAGGCTGTCGCGGAAGCCTACGCAGGAGAGCTCAAGACCG CTCTCGAGGAGGCGTACGAGTACATCGAGCAGCTCGAAGAGGAGAGGTGC GTAGATACAGTATATGTGTGTGTGTGTGTGTGATCTTATTATCTTTGGAG CCACCGCTGATCGACCTTCTCGTCCTTAGGTTCCTCCTCGGTGCAGGTGG TGACTACATACCATCCTCTCGAGCGATATCCCAGCACTTAGCATGATACT CGGGTAGCGGGAGTTGAAGTCCACCGAGATGACACCCTTGGCTACATACT TATGTGTGTATGTGTATGTTGTCTTCACATTAAAACCCGTTCCGATCTCT CCATCCAGTACCTCTCCATGTCCGGACTAATCCAACACTTGATGCGGCCT ATCCCGTGGTCATAGGCTAACTTATACCCAAGAAAAGGTACACGAAACAT CTGTACATACCTTTATCTTTGCGCAAGTCGACCTAACTTATACCCAAGAA AAGGTACACGAAACATCTGTACATACCTTTATCTTTGCGCAAGTCGAACA GTTGCAATCCCTCCCCACGCTACTGGTTGCATTAGCATATAGCTGTACCC TCAAGCACTACGGGATCGAATTGTCGGCCGAACGTATTCGTTGTATTATG TATGTCCGAGCTGTTAGGTCTCGTCGCTTCGGTTGGTTGCCTGGGTCGTT GGTTCTTACGATATGATAAGTATGTGGAGGTGTCGAGAGCTGCTCTCTTA TCCAAGAGAGGTTTTGTTATCTTGTGGACCGTTTACTGCTCGTCTTCGGT GGAGACGCTGGAAAAGGCGCAAGCCATTTTTTTATTTTCCCTCCCATTAT TGGCATATTTGTCGTCTGCTCCACTGGCATGCATCGCTCATCCTAAAACC TTTTCTGAGGCTGAGAAGCGTTGCACCATACTGTATAGCAGTACGAGACC GTCCGAGCTGGACTTGACTTTCTAAACTCCCTGGTCACGTGTGTTTGAGT TGAAGAGTCGCAAAGGGTTCCGTTTTATGTTTACCGCGATGCAGCTGCTG TTCAGGTTTCCACCGGAGAGCCAACCAGTATTTTTGTCGTCCACTGCTTC AGTTATCTCTTTTCATGTTCTAGATGCAGCTAAAAAGCTGTCGAATACGA ACCAGGGCCGGCATGCGATCGATGTGCCACCAAACAAACACCACAAGTAC TGCCAGACACAAAGCCCGGTTCGGCAAGCATACCGTAATCATGCGAAGGT TCGCACCCCCGTGTTAGCATTTTTCTATAGCGTATTTCTCCACAACCAGG AGGGCTATAGAAAAACGCTAACACGGGGTGCGAACCTTCGCATGATTACG ATACTACAGCAGTATTTTGTATTTTTTACTTATGTAGCGGATGGATCTAC TCGGACCGCTCTCCGCATTTTTTTTTTCTTCACACGTATTTCCAGTGCTC GATGGGCTCCCTGTCACGAGGACATCTTGCCAGAGTATTGAACCGTGGTA ACGCAGAAGGAGGGTTCCTATTGAGCCGTTGCTTTGCCTTGACCGCAGAA TCGCAATCTGACCCCTTTTTGGCCGCGCCACGGTCGGTGTTTTACGCCTA TTCGTGTTTTACGTCTTTTTGTATCTGTCTATATTATATGGCTTGATCGA TCAGGGAAGTGCAGAGCAATAAGGTGTACGGCCTGGAAGAAGAACTCCGC TCGGTCGCGTCAAAGCGCCGTCACTACGAGGACCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGAAACCCGTCTT GGGGGGAAGATGCCCACGACCAGCACGAGCACCAACAGCACCAACACCCG CACCATGGCGGGGAAGGGCACCACGAGGGCGGCGAGGAGGTGGGCAAGCG CGACAGCAGCAGCAGGCCGGGAAGCAACAGCAGCAGCGGCTACCGTGATC GCGATCCGGATGCCCCGCCGCCCCCGCCGCCCGAAGCCGAAGCCGAAGTC GAAGCCGACACCGCGCCCCCCGGAGACGGTGATGACATGGACGACCTCTA CGGCGACATGAACATGGACGCTATCGGGGGCACGTTCTTGCCTGATGAGG GCGGCGGCCAGGCCGGCCAAGAGGATCTGGTTGTCAAGGATGACCCCATG CAGCAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGGA AAAGATGGAGGATACCCCGCCGCCCCCCGCGAGGGGGAGAAATACGAGAC GCTCGACGCGAAGCAGAAAATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6580:3730..10452-

>mRNA_L-elsbetiae_contig6580.15285.1 ID=mRNA_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2364bp|location=Sequence derived from alignment at L-elsbetiae_contig6580:3730..10452- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAGCCCTGAT
GGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAGCCCTGATGG
CACGGCTGTCGGCGAAGGAGCAGGAGGTGTACGAGGTGCAGGCATCGGCC
CGGGATCTCTACAGAGCCAGAAGATGGCACGGCTGTCGGCGAAGGAGCAG
GAGGTGTACGAGGTGCAGGCATCGGCCCGGGATCTCTACAGAGCCAGAAG
GCCAGTGACAGATTTCGCGCGGCAAGTGTACACGGATCCTGCCATCAACG
TAGAGTTTCAGCTTCTGACCGCGCAGCTAGCCGAAATGCCAGTGACAGAT
TTCGCGCGGCAAGTGTACACGGATCCTGCCATCAACGTAGAGTTTCAGCT
TCTGACCGCGCAGCTAGCCGAAATGGAAAATTCGTTACGGCTGAAAGAGG
CGGAGCTGAAGGAGCTTCGCACGACAGCCGACAAGAAGGACAAGGGAAAA
TTCGTTACGGCTGAAAGAGGCGGAGCTGAAGGAGCTTCGCACGACAGCCG
ACAAGAAGGACAAGGAAACGGGGACAGGGTCTGCGGTCAAGGGACCCGAC
GGCAAAGCCGGCGCAGGAAGCGGCGCCGCCGGCGCTAGCGGAGAGAGCAC
GGCGGCGAGGGCGTCTGCTCTGGTGGCTCGATGTCAGCGGCTGGAGCAGG
AAAACGAGGAGCTCGCCGCGTCTGCCGACGTTGCCAAAGGAAACGGGGAC
AGGGTCTGCGGTCAAGGGACCCGACGGCAAAGCCGGCGCAGGAAGCGGCG
CCGCCGGCGCTAGCGGAGAGAGCACGGCGGCGAGGGCGTCTGCTCTGGTG
GCTCGATGTCAGCGGCTGGAGCAGGAAAACGAGGAGCTCGCCGCGTCTGC
CGACGTTGCCAAAGTGGCACAGCTCACAAGCGAAAAGGCTGTCGCGGAAG
CCTACGCAGGAGAGCTCAAGACCGCTCTCGAGGAGGCGTACGAGTACATC
GAGCAGCTCGAAGAGGAGAGTGGCACAGCTCACAAGCGAAAAGGCTGTCG
CGGAAGCCTACGCAGGAGAGCTCAAGACCGCTCTCGAGGAGGCGTACGAG
TACATCGAGCAGCTCGAAGAGGAGAGGGAAGTGCAGAGCAATAAGGTGTA
CGGCCTGGAAGAAGAACTCCGCTCGGTCGCGTCAAAGCGCCGTCACTACG
AGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGGGAAACCCGTCTTGGGGGGAAGATGCCCACGACCAGCACGA
GCACCAACAGCACCAACACCCGCACCATGGCGGGGAAGGGCACCACGAGG
GCGGCGAGGAGGTGGGCAAGCGCGACAGCAGCAGCAGGCCGGGAAGCAAC
AGCAGCAGCGGCTACCGTGATCGCGATCCGGATGCCCCGCCGCCCCCGCC
GCCCGAAGCCGAAGCCGAAGTCGAAGCCGACACCGCGCCCCCCGGAGACG
GTGATGACATGGACGACCTCTACGGCGACATGAACATGGACGCTATCGGG
GGCACGTTCTTGCCTGATGAGGGCGGCGGCCAGGCCGGCCAAGAGGATCT
GGTTGTCAAGGATGACCCCATGCAGCAAGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAAGAGGAGCAGGAAAAGATGGAGGATACCCCGCCGCCCCCC
GCGAGGGGGAGAAATACGAGACGCTCGACGCGAAGCAGAAAATAGGGAAG
TGCAGAGCAATAAGGTGTACGGCCTGGAAGAAGAACTCCGCTCGGTCGCG
TCAAAGCGCCGTCACTACGAGGACCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGGGAAACCCGTCTTGGGGGGAAG
ATGCCCACGACCAGCACGAGCACCAACAGCACCAACACCCGCACCATGGC
GGGGAAGGGCACCACGAGGGCGGCGAGGAGGTGGGCAAGCGCGACAGCAG
CAGCAGGCCGGGAAGCAACAGCAGCAGCGGCTACCGTGATCGCGATCCGG
ATGCCCCGCCGCCCCCGCCGCCCGAAGCCGAAGCCGAAGTCGAAGCCGAC
ACCGCGCCCCCCGGAGACGGTGATGACATGGACGACCTCTACGGCGACAT
GAACATGGACGCTATCGGGGGCACGTTCTTGCCTGATGAGGGCGGCGGCC
AGGCCGGCCAAGAGGATCTGGTTGTCAAGGATGACCCCATGCAGCAAGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGGAAAAGATGGA
GGATACCCCGCCGCCCCCCGCGAGGGGGAGAAATACGAGACGCTCGACGC
GAAGCAGAAAATAG
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