mRNA_L-elsbetiae_contig6559.15253.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6559.15253.1
Unique NamemRNA_L-elsbetiae_contig6559.15253.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: D8LKY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 9.330e-47
Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1 
Query:    1 QVKELAAANATLELKRKATTSALKSMAAEMDKRAARGPAGAGADDPPA---EQMSLKFFLDEMQSKVSLAMEGADEKALESKEYKDVMKKIIPPDGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKA-GAASCPVAGCLHKVTMGDLVEDKDMKRRLRIE 537
            QV++LAA NA LE+KR AT SA+K++AAE+DK+ A                E+M + +FL+ M SK+S AMEGADEKALESKEYKD+MK I+     + ++ II+P    +VSLKCP T++T  DPVK+K CGHTYG+ AI NHIR++K  G  SCPVAGC +KV   DLV DKDM RRL+IE
Sbjct:  200 QVQQLAAQNAKLEIKRAATASAMKTLAAEVDKKTAXXXXXXXXXXXXXXXXEEMDMAYFLESMTSKLSSAMEGADEKALESKEYKDLMKMIVAT-AMDDDDDIIVPNDN-RVSLKCPLTSSTFVDPVKNKVCGHTYGKKAILNHIRVAKNDGGVSCPVAGCSNKVVKADLVPDKDMMRRLKIE 380
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A0D7AZC9_9AGAR (SP-RING-type domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7AZC9_9AGAR)

HSP 1 Score: 83.2 bits (204), Expect = 5.990e-14
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 1 
Query:  253 MKKIIPP-DGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLRIEADANKTQRGENAVEIDE 588
            + ++IP  DG+ES++   +  GG     KCP T A L++P+KSK CGH+Y   AI  +  ++   + SCP +GC  K+T+ D V DKD  +RL+  A     +R E  +E+DE
Sbjct:  209 VSELIPKEDGDESDDDDEVEIGGVTQDYKCPLTLAPLDNPLKSKICGHSYSGDAIRQYF-VNSRESKSCPASGCNKKITLADCVSDKDFNKRLK--AHRRMQKRREEEMEVDE 318
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A067ME84_9AGAM (SP-RING-type domain-containing protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067ME84_9AGAM)

HSP 1 Score: 78.6 bits (192), Expect = 1.890e-12
Identity = 46/142 (32.39%), Postives = 78/142 (54.93%), Query Frame = 1 
Query:  148 QMSLKFFLDEMQSKVSLAMEGADEKALESK----------EYKDVMKKIIPPDGNE---SEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLRI 534
            +  +K  LD+ Q+K S    G +E+ ++ +          E      + +P D  E   S++ I++  GG + S  CP T   L+ P+ S +C H++   AI  +++ SK G ASCP  GC HK+TM DLVEDK+++ ++++
Sbjct:  143 ERGVKDRLDKYQAKTSKQKYGKNEEYVKFRQTIWEVRHADEAMPPATQFLPTDEGEDEGSDDDIVV--GGVKKSYTCPLTLTPLQKPMTSIKCNHSFSAHAIREYLK-SKNGIASCPATGCAHKLTMRDLVEDKELENKIKL 281
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A0D0DLV3_9AGAM (Unplaced genomic scaffold scaffold_731, whole genome shotgun sequence n=1 Tax=Paxillus rubicundulus Ve08.2h10 TaxID=930991 RepID=A0A0D0DLV3_9AGAM)

HSP 1 Score: 76.6 bits (187), Expect = 1.190e-11
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  274 DGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLRIEADANKTQRGENAVEIDE 588
            +G+ S+E   +  GG     KCP T  TL++P+ S+ CGH+Y + AI +++R +     SCP +GC  ++TM  L  DKD+++R+++ A   + QR     + DE
Sbjct:  240 EGDVSDEDDDLEIGGVTQDYKCPITLMTLDNPMTSQICGHSYSKAAIQDYLRRAGMNGKSCPASGCHKQITMDQLQPDKDLEKRVKLAA--RRQQRRNEDSDADE 342
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A2T9Z1H1_9FUNG (SP-RING-type domain-containing protein n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9Z1H1_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 9.160e-10
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  325 VSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLR 531
            V  KCP +   LE+P+ SK C H+Y +  +  ++   K G   CPV GCLH +TMGDL E+K ++ R+R
Sbjct:  172 VGFKCPLSTNYLENPMTSKLCNHSYSKAVVLEYL---KKGRKQCPVTGCLHSITMGDLYENKILEGRIR 237
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A6S7HQ65_PARCT (E3 SUMO-protein ligase NSE2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HQ65_PARCT)

HSP 1 Score: 67.0 bits (162), Expect = 5.500e-9
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 1 
Query:  265 IPPDGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLR 531
            +P D NE+ +  II    ++ S+ CP T   + +PV+SK+C H+Y +  I +HIR ++     CPVAGC H V   DL  +  +  R++
Sbjct:  138 LPTDQNETIDSDIIIAQASEESIICPLTQKQMVEPVRSKKCQHSYEKAGIIHHIR-ARQNRVRCPVAGCAHYVVEADLEPNSSLAFRIK 225
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A7S1FUW8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUW8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.110e-8
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1 
Query:  274 DGNESEEGIIIPR--GGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLH-KVTMGDLVEDKDMKRRLRIEADANKTQRGE-NAVEIDEDDADDVG 609
            D N+ EE  I+    G ++ S+KCP TAA LEDPVK+  CGHT+ R  I   +R  K   A CP  GC + ++T   LV+DKD + R+R   +  + ++   +A   D DD D+ G
Sbjct:  165 DKNDDEEMEIMANQAGESEQSMKCPITAAFLEDPVKTNSCGHTFSRAGIMGLLR-GKTFVA-CPCYGCGNTRITEKSLVDDKDAELRIRRYRNRQEYEKRHLDAAYEDFDDEDEDG 278
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: S8FVY6_FOMPI (SP-RING-type domain-containing protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8FVY6_FOMPI)

HSP 1 Score: 66.6 bits (161), Expect = 2.230e-8
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1 
Query:  262 IIP-PDGNESEEGII-IPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLRIEADANKTQR 561
            +IP  DG+ES+     +  GG     KCP +   L DP+ S+ C H+Y   +I  ++ I + G   CP AGC   +++GDLV+DK++ ++ +   DA + +R
Sbjct:  225 LIPREDGDESDXXXXDVQVGGVTQDYKCPLSLTILVDPLTSRLCHHSYSAASIREYLNI-RGGRKQCPAAGCHQMISLGDLVQDKELAKKAK---DAARRER 322
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: A0A1Y3MQ90_PIRSE (SP-RING-type domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MQ90_PIRSE)

HSP 1 Score: 63.2 bits (152), Expect = 5.950e-8
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1 
Query:  322 QVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLR 531
            Q S+KCP T   + DP+ S+RC H+Y  V I + I+ S      CPVAGC+H VT+ DL  +K + R++R
Sbjct:  105 QESIKCPITKRIMTDPLISRRCEHSYSSV-IKDIIKDSNERRIECPVAGCVHFVTLSDLRPNKLLARKIR 173
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BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Match: UPI00106D07F6 (E3 SUMO-protein ligase NSE2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D07F6)

HSP 1 Score: 63.5 bits (153), Expect = 8.490e-8
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 1 
Query:  265 IPPDGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVKSKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRRLR 531
            +P D N + +  I+    ++ S+ CP T   + +PV+SK+C H++ + AI +HIR+ +     CPV GC H VT  D+  +  +  R++
Sbjct:  140 LPTDQNATIDSDIMIAQASEESVICPLTQKQMVEPVRSKKCHHSFEKAAILHHIRV-RQNRVRCPVGGCAHYVTEADIEPNSSLAFRIK 227
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6559.15253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LKY2_ECTSI9.330e-4755.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0D7AZC9_9AGAR5.990e-1438.94SP-RING-type domain-containing protein n=1 Tax=Cyl... [more]
A0A067ME84_9AGAM1.890e-1232.39SP-RING-type domain-containing protein n=1 Tax=Bot... [more]
A0A0D0DLV3_9AGAM1.190e-1135.24Unplaced genomic scaffold scaffold_731, whole geno... [more]
A0A2T9Z1H1_9FUNG9.160e-1043.48SP-RING-type domain-containing protein n=1 Tax=Fur... [more]
A0A6S7HQ65_PARCT5.500e-935.96E3 SUMO-protein ligase NSE2 n=1 Tax=Paramuricea cl... [more]
A0A7S1FUW8_9STRA1.110e-839.66Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
S8FVY6_FOMPI2.230e-834.31SP-RING-type domain-containing protein n=1 Tax=Fom... [more]
A0A1Y3MQ90_PIRSE5.950e-844.29SP-RING-type domain-containing protein n=1 Tax=Pir... [more]
UPI00106D07F68.490e-832.58E3 SUMO-protein ligase NSE2-like n=1 Tax=Dendronep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6559contigL-elsbetiae_contig6559:2362..8726 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.8
Seed ortholog evalue3.8e-35
Seed eggNOG ortholog2880.D8LKY2
Preferred nameNSMCE2
Hectar predicted targeting categoryother localisation
GOsGO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000793,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004857,GO:0004860,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006469,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008156,GO:0008284,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010015,GO:0010073,GO:0010075,GO:0010082,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010605,GO:0010638,GO:0010646,GO:0010647,GO:0010948,GO:0010965,GO:0012505,GO:0016043,GO:0016604,GO:0016605,GO:0016740,GO:0016925,GO:0018193,GO:0018205,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019787,GO:0019789,GO:0019887,GO:0022402,GO:0022622,GO:0023051,GO:0023056,GO:0030071,GO:0030234,GO:0030291,GO:0030915,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031331,GO:0031399,GO:0031400,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032268,GO:0032269,GO:0032270,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032875,GO:0032876,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034641,GO:0036211,GO:0040008,GO:0042127,GO:0042325,GO:0042326,GO:0042592,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045859,GO:0045862,GO:0045876,GO:0045931,GO:0045934,GO:0045936,GO:0046483,GO:0048364,GO:0048507,GO:0048509,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048638,GO:0048731,GO:0048856,GO:0048869,GO:0050000,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051276,GO:0051338,GO:0051348,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060249,GO:0060250,GO:0060255,GO:0061659,GO:0061665,GO:0062033,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0080036,GO:0080038,GO:0080090,GO:0090068,GO:0090304,GO:0090329,GO:0090398,GO:0097240,GO:0098687,GO:0098772,GO:0099402,GO:0106068,GO:0140096,GO:1901360,GO:1901564,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905392,GO:1905818,GO:1905820,GO:1990234,GO:1990683,GO:2000026,GO:2000104,GO:2000112,GO:2000113,GO:2000280,GO:2001252
EggNOG free text desc.SUMO transferase activity
EggNOG OGsKOG2979@1,KOG2979@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-11_006000.1
Exons6
Model size1370
Cds size549
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6559.15253.1prot_L-elsbetiae_contig6559.15253.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6559 3943..7980 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816723.6121702-UTR-L-elsbetiae_contig6559:2361..24061622816723.6121702-UTR-L-elsbetiae_contig6559:2361..2406Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 2362..2406 +
1691683766.2553263-UTR-L-elsbetiae_contig6559:2361..24061691683766.2553263-UTR-L-elsbetiae_contig6559:2361..2406Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 2362..2406 +
1622816723.627488-UTR-L-elsbetiae_contig6559:3912..39421622816723.627488-UTR-L-elsbetiae_contig6559:3912..3942Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 3913..3942 +
1691683766.273676-UTR-L-elsbetiae_contig6559:3912..39421691683766.273676-UTR-L-elsbetiae_contig6559:3912..3942Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 3913..3942 +
1622816723.7107925-UTR-L-elsbetiae_contig6559:7980..87261622816723.7107925-UTR-L-elsbetiae_contig6559:7980..8726Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 7981..8726 +
1691683766.3337984-UTR-L-elsbetiae_contig6559:7980..87261691683766.3337984-UTR-L-elsbetiae_contig6559:7980..8726Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6559 7981..8726 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816723.6461108-CDS-L-elsbetiae_contig6559:3942..40171622816723.6461108-CDS-L-elsbetiae_contig6559:3942..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 3943..4017 +
1691683766.2843885-CDS-L-elsbetiae_contig6559:3942..40171691683766.2843885-CDS-L-elsbetiae_contig6559:3942..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 3943..4017 +
1622816723.6578724-CDS-L-elsbetiae_contig6559:4687..48041622816723.6578724-CDS-L-elsbetiae_contig6559:4687..4804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 4688..4804 +
1691683766.2947164-CDS-L-elsbetiae_contig6559:4687..48041691683766.2947164-CDS-L-elsbetiae_contig6559:4687..4804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 4688..4804 +
1622816723.6732364-CDS-L-elsbetiae_contig6559:4981..50951622816723.6732364-CDS-L-elsbetiae_contig6559:4981..5095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 4982..5095 +
1691683766.3059573-CDS-L-elsbetiae_contig6559:4981..50951691683766.3059573-CDS-L-elsbetiae_contig6559:4981..5095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 4982..5095 +
1622816723.685681-CDS-L-elsbetiae_contig6559:6330..64741622816723.685681-CDS-L-elsbetiae_contig6559:6330..6474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 6331..6474 +
1691683766.3152943-CDS-L-elsbetiae_contig6559:6330..64741691683766.3152943-CDS-L-elsbetiae_contig6559:6330..6474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 6331..6474 +
1622816723.696342-CDS-L-elsbetiae_contig6559:7881..79801622816723.696342-CDS-L-elsbetiae_contig6559:7881..7980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 7882..7980 +
1691683766.324247-CDS-L-elsbetiae_contig6559:7881..79801691683766.324247-CDS-L-elsbetiae_contig6559:7881..7980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6559 7882..7980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6559.15253.1

>prot_L-elsbetiae_contig6559.15253.1 ID=prot_L-elsbetiae_contig6559.15253.1|Name=mRNA_L-elsbetiae_contig6559.15253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MAAEMDKRAARGPAGAGADDPPAEQMSLKFFLDEMQSKVSLAMEGADEKA
LESKEYKDVMKKIIPPDGNESEEGIIIPRGGTQVSLKCPCTAATLEDPVK
SKRCGHTYGRVAIANHIRISKAGAASCPVAGCLHKVTMGDLVEDKDMKRR
LRIEADANKTQRGENAVEIDEDDADDVGMTCI*
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mRNA from alignment at L-elsbetiae_contig6559:2362..8726+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6559.15253.1 ID=mRNA_L-elsbetiae_contig6559.15253.1|Name=mRNA_L-elsbetiae_contig6559.15253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6365bp|location=Sequence derived from alignment at L-elsbetiae_contig6559:2362..8726+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGAAGGAGCTCGCCGCCGCGAACGCCACGCTGGAACTGAAGGTATG
TACATATGTATTGCGAATGCGGCACCGCTCTACAGCAGGTGCATGCATAC
CCGCTCTGCCATTTGCTCGGTTTGATTGGCTTGTGTCCCGGGAAGGCTTT
GAGCTCGTTGTATTTTGAAGTACGTATCTACAGCCACAGCAGTAGTAGTA
CAGCCACAGCAGTAGTAGTCAGCACGTAGATAGCTGGGAAAAGGACACCG
CGGTTGCCTGCGAGTAAAAAGAGACAACTCGAGGGATGAGCATGGGAGGC
CTTCAGTGCCGCTGTTTGACATGCTATAACCGCACGTGGAGGAGCATCAT
ATCATATAAATAGCAGAAATGTGGAAATTGGAAATTGCACTGCTGGTCAT
CGTTTGCCGCACTTGACGTAGTCGTTTGGTACTAACCGTTCATGATTTGG
CTGTTTGTAAACGACACGCGTGTTTAAGCCATGCTTGAAATGCCAATGTA
TCGCTCGTTTTTATTTTTATTTTTTTGAGTCTTCTTGTTGGTTTCTAAAT
AGGCAAGAGAAGGCTTTCTAGGGTGACCGGAACTAGGCTTGAACTCGCTA
GGCGATTTGCGAAATTGCGGAGGAACAAAAGTCCTTATTATACTGGTTTT
AGTGTAGAAAAAAAGGTGTAGGTAAAACGAAAAAAAACGCCCAGCGAGTT
CAAGCCTAACCGGAACCCGGCCGGCTGGCGGCGAATAGTTTTTTTCCCGC
TTTTTCACATATCCTCTGAGTACGGGCTCACCACGTCCGTTACTGGTTTT
GTAGAGAGACGCGGCAGAAAATGCCTGCGTTATATACACCTACCCCGGCA
CTGCACCTACATGGTGTACCCGCTCGTGGCTCTAGCACCTCTGTGACCAC
GGGCCTTGAGTTGCTAGATTTTGGAATTAGCAATCTCGATTAAACGAGCT
AATGTGAAGAAACAACAACAACAACAACAACAACGTCTTAGAAATTCCGC
GTTCGATTACTGAGTTTTCGTTTCGATCCTCCACGTTGTTTCTTAATTGT
TTGTGGAGAGAAAACTCTTTGACTCTTTCCTGAAAAAGAAACCGTCATGG
TGATACTCGAACTCGGGACTTTGTCAACCGAAACCAGCATTTATTCGCGA
CACCAATGTGAAAGAGGGTCAAACGTCTTCGACAGACGATGGGAGGGTTT
TACCCCTAGTAAAGGGTGTCTGTCCTCCACAGTCTCCCTTTTTTCTTTTT
CTTCTCTCACTTACGAGTATCTTTTTCTTTTCTCACTTATGAGTATCTTT
TTCTTTTCTCACTTACAAGTATCTTTTTCTTTTCTCACTTCCAAGTATCT
TTTTCTTTTCTCACTTACAAGTATCTTTTTCTTTTCTCACTTCCAAGTAT
CTTTTTCTTTTCTCACTTACAAGTATCTTTTTCTTTTCTCACTTACAAGT
ATCTTTTTCTTTTCTCACTTACAAGTATCTTACATATATTTACGGCAGTG
TTCGGACCATGACACATGTGTGGCGTATGATGTTGTTCTATTTCTGTCCA
GAGGAAGGCAACGACGAGCGCGCTCAAGTCAATGGCAGCAGAGATGGACA
AGAGGGCCGCCAGAGGGCCGGCAGGGGCTGGGGCCGACGATCCTCCCGCT
GAACAGGTACATGCATGTGTTGTAAATGTGCTGCACGTGCCCCGAGTACC
TCGAAAAGCGGCGCATGTACGACGGCATTATGTTTCACACGTCGACCAAT
CGGCGGCGCGGCAGCGACACTCCGCGTCTCACCCCCCCCCCCCCCCCCGC
CCCCACCCTAACTTTTCCCAAACCCCCACCACCTCTGCACACACACAACA
ACGCTCCACACNNNNNNNNNNTTTTTTCCCCCCACACCCCAGCGGGGGGG
CGGCAGCGCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTGATCGAA
ATTTTAATTTTCCAATAAATAACTTGATTTCGCAAGCCGAAAAAAAACGC
CTGACGCACGTTTTGTACATAGGAGTAGTTGCTTGTTTCACCAGCCAAAC
GATTTCATGAAAAACAACGAAAATGCTGAGTTTGAGGTTTCGCGGTGTTG
GATGTCGTTGCAACACTTAACATTTTATTTTCTTCGATTTCTGGCGGAAC
ACGGAACGATGCAAAAAAAAAAAAAAAGAGGAGCCAGAAGGGCCGCCTGG
ACGAGGAGCAAAGCAAAGAGGCCGAAGACAATGGAGGGGGGGGAGGAGAG
CGGCGGGACGCNNNNNNNNNNTTATTTTCTTCGATTACTGGCGAAAAACG
AAAAAAAAAAAAAAAAAAAAAAAAAGATGAGCCTGAAGTTCTTCCTGGAC
GAGATGCAGAGCAAGGTGTCCCTGGCCATGGAAGGGGCCGACGAAAAAGC
GCTCGAGTCGAAGGAGTACAAGGACGTCATGAAGAAGATCATCGTGAGTG
ATGATGACCGCGATAGCTCGCCGCAGAAAATGGATGTTGGGACGAGTGGT
ATTTAGCCACGATCGTCAAAGATATGGTACATAAATACGCTCGGAAGATA
AAATGTGTTCCTTGATCCATAATCCTTGTCGTGTCCCCGCCTCCCCCCCC
CCCCCCGCTCTGACTGGCAGCCCCCCGACGGCAATGAGAGTGAGGAAGGC
ATCATCATTCCGCGGGGCGGCACCCAAGTCAGCCTCAAATGCCCGTGCAC
AGCGGCCACCCTCGAGGACCCCGTCAAGAGCAAGGTATGTCTGCACGTCG
TGGCGTTGTTAGCAGCACAGAAGTATGTAGCATTGCATTGGCTATACGAA
GACCATGTACCGTAGGTGACGTAAGATACCACACCCCCTGGATAGATTTT
TAAAGCTCGACGCTTCTGAAAGCATGAGCGAGCATACATACACGGGTATC
AGGATAAATACCGTGACCCCGCCTAGATATTTCTCGACTCTGCAGAAACC
AGCAGATAATGCGGTGTAAATTTGGTTTTGTTTTTTCCTCCCATTATTGG
CATATTTGTCGACTGCCCTTCCTCCACTACAGACTAGCTAGACCAACCAA
CCGGGGTCACACAGGAGGGACCCCCTCCTGCGGTGCCTGCCTTAAATTTT
TTTATCGCGAGCAGGGTTCAGCACTCGCCACCCTCGTCAACAATGAACTC
GAAGTAATGTGCAACCGCGAAGCAGGAGTGCTATTTGCAGGCACCAGAAT
CAAACAGACTAAGTCAGGATGACCGGAAAAATCAGCCCCAGGAAACAAAA
CCCACCGTTTCCGAATCCGATCAATCAACGACCAGCAGTGCAGGTGACAA
ATCACTCACCCCCCCTGGGTTGTATTAACTAACGACGCACGCCTACTCAC
CCACCAGCTAGATTCCGCGGATCGCGGAAATCTGTGCTCTCTCCGGCAAA
CCAGTTCATCAATCGAGAAACCGAGAAACCGACCAACCGAGAAATCGGTG
ATCATATCAAATCGATATGCGCATACAGACACCGCCATTGATCATTTGAC
GGCCCTGCATAGAGGGTGGAACGCTCTGCATCTAGCTAGTAGCTTACCGT
ATGTGACACGAGATACCACACCCCTTGGACCGAACTTTAGAGCTCCGGTT
CTCCGTAACGAACAGGCTGCCAGCATCAAACCACACATTTTCGGACAACC
CTCGACTAGGTCTTTCCAGCGCCGCCCCAGGCCGAAGAGTGTGTTGTAAA
AGGCACGGGAACGAGCGGAAAGTCAAAATTATGGCATTCAGGCATTTTCG
AAGTTATGTAAGAAGCACGCACACACATCTTGACCGAGACAAAACATAAA
GAAGCTACAATACATACCCACCGAGGGGTTCGCGGGGGATGCGAGCAAAA
CAAACGAGGTAGGTACCCATTATGGACTCCATGCGTAGGAATACGACCGG
CGCGGTAAAACAGCGAACAAACGAGTATGTATCATTCCCGCACACGCGCC
ACCCCCCACACACACACAGCGTTGCGGACACACATACGGGAGAGTCGCGA
TCGCCAACCACATCAGGATCAGCAAGGCGGGTGCAGCTTCGTGTCCCGTT
GCCGGCTGCTTGCACAAGGTCACCATGGGCGACTTGGTCGAGGACAAGGA
CATGAAGCGCCGGGTGAGGGCATGCGTGTCGTCGGCCTGGGTACATATTT
TACTCCTTGCTTGCCTACTCCCGTACATGTAACATTTACCTGAAATCTTG
GTCATTTGGTATCTTTTCTTCTTTGAGGCCCGGTTGTGTGGCGGCGGCCG
TTACGCGCTCGCGCGCGCGTGTGTGTGCGTGCGTTCGTGTATTTACCGCA
TGTATGTATCCACGAGTATTTGGTTTTTGCCTTTGTTCTTTTTGAAGTGT
GTAACATTTTATGTTTCACCTCGTATGTACGAAAGGAGAGAGGGCGGCTT
GGTAGAGGTGGTCAGACCGCGGTTTGCGTTTGTGAGGTTTAAGGTGAATG
GATATTGAGGTAACGATTACAGCGCCAGGACTGGCGTGGCACACGGCCGG
TCGCCGAGGTTGGGTTTTACGGTTTTACTACCGCTCGTTTTTTTTTTTTT
TTCGCCCCTTTGAATAGACATGTTGCGTCCAAACCGAAAAACTATTTGCT
GTTTATCGGGTGAACTAAATCTATCGGGTGACTTCGGCGCCGCGCCCCGT
GGAACAATGTCGCTGTATCTAGCGGGAGCAGCACAAAGGGCGGCCGGCGT
GTGATGGTCGCACCTACCGTAATCATGCGAAGGTTCGCACCCCCGTGTTA
GCATCTTTCTAAAGCGTATTTCTCCACACCTGGTTACGGTACTCATTATC
CTCTTGTGACGTAAATATCGCATATTATGTACATCATACTCGGTCGTACA
AACTAGTGCTTTCCACCGGTCCCAAGCTGTATCTTACGATCCCGTATGTA
ACACGAACGGTGAACGTAGCTCCTGTTCCTACATTACATACGAGGTTTCG
TAGAACTGCTGTACACATGTCTCCCCCCCCCCCCCCCCCCCCCCCCGAGA
GGGAGGGGAGCAGGGAAACCGAAATAAAAGAACAAGTAACCAGAGCAGCG
AAATNNNNNNNNNNCTCGTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGCTAGGCGGTAGAGGAGAGACGTGAAATCGAGACAACTGTCTCATCTCG
GGGAAGGTCACAGCTACACACATACACCCTAGGCAGGCACCGCAGGAGGG
GTTCCAGCCCCCCCCTCCTATGTGACCCCGGTTGGGTCGTCTAGCTAGAG
TAGAAGTGGAGGATGGGGGCCAGAGGGGCAGACGACAAAATCCAATATTG
GGCAGAAAAAAAAAAAGAAAAAGAAAAAACATAGTCTACTCCCCGTATGT
ACGTGAAACTACACAGCCGTGTGTTGCTCATAAACCAAAAAAGTGGTAGG
TGGTACACCGCAGTACCTTCATAAAAGTTGTGTTGTAAGTGTACCCACCC
CCTCATATCTATTCGTGTTTTGATTGACGGCCATGCATCCCCAAACGTTG
TTTTTCCCTTCGCTCCGCAGTTACGGATCGAGGCCGACGCAAACAAAACC
CAACGGGGGGAAAACGCCGTCGAGATCGACGAAGACGATGCGGACGATGT
GGGAATGACGTGTATCTAACCCGCTGAATCTTTTGGGATGATTTGATTCC
TTGAAAGGCCGGGTTTGGTGTTTGGGTGGTTGACACCAGAGCCTTCAAAC
GGGTTTTCGAGTCATTTTTCGCTGCTGCAGAAAGGTGTCGGCGTTAAAAC
TACAATAGAGGTGGCGCGTTTTTTTTTTATGGTGCGTACATGTATATGCA
CGTGATTTTTTCGCCCCTTTTACTACTATTGTAGTGTTGTGTGAAAAGGA
AGGGAAAACATGCGTGAGACAGATCTTGGAATGAACCGCATTGGTTGAGA
ATTGAGTCTCCTTCTTTTGCATGAAGTGCTGCCAGAGCGCTCCCTCTTGA
AGGTCTCAGCAAAGCAGCCTTGCAGTTTCCATCCATTCAGAGGCGCCACA
TGAGAGAGCCACTTACGGAGTACGCACCGCTCGTCGGTCCCAACAGAATG
ACAAAATGGCGGCAGACAGTAGTATTGAGCCTACACAGCACAGTAGTTTG
CAGGCAGGGCTGGCAGCTGAGACTGCTGTGCTGAATGAATTTACTGCTGC
CGTGAAGGGGCGGTGAACCACCAAGAAACAGAGAGTAGTATCCTAGATGC
CCAGCACATCCAAACACGCCCATCGGCCGGTGGACGCTATAAAGCTGCGG
GCTAAGAGAGCATGGGGCAGCTTTAATTTGATGTGGACCATTTTGGTACC
CGTAGCGTAGGGTGCACCGTGTCCTGACGACTGGCGTATGTAGCTCCTAC
ACGTGTGCCTCCAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6559:2362..8726+

>mRNA_L-elsbetiae_contig6559.15253.1 ID=mRNA_L-elsbetiae_contig6559.15253.1|Name=mRNA_L-elsbetiae_contig6559.15253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig6559:2362..8726+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGCAGAGATGGACAAGAGGGCCGCCAGAGGGCCGGCAGGGGCTGG
GGCCGACGATCCTCCCGCTGAACAGATGGCAGCAGAGATGGACAAGAGGG
CCGCCAGAGGGCCGGCAGGGGCTGGGGCCGACGATCCTCCCGCTGAACAG
ATGAGCCTGAAGTTCTTCCTGGACGAGATGCAGAGCAAGGTGTCCCTGGC
CATGGAAGGGGCCGACGAAAAAGCGCTCGAGTCGAAGGAGTACAAGGACG
TCATGAAGAAGATCATCATGAGCCTGAAGTTCTTCCTGGACGAGATGCAG
AGCAAGGTGTCCCTGGCCATGGAAGGGGCCGACGAAAAAGCGCTCGAGTC
GAAGGAGTACAAGGACGTCATGAAGAAGATCATCCCCCCCGACGGCAATG
AGAGTGAGGAAGGCATCATCATTCCGCGGGGCGGCACCCAAGTCAGCCTC
AAATGCCCGTGCACAGCGGCCACCCTCGAGGACCCCGTCAAGAGCAAGCC
CCCCGACGGCAATGAGAGTGAGGAAGGCATCATCATTCCGCGGGGCGGCA
CCCAAGTCAGCCTCAAATGCCCGTGCACAGCGGCCACCCTCGAGGACCCC
GTCAAGAGCAAGCGTTGCGGACACACATACGGGAGAGTCGCGATCGCCAA
CCACATCAGGATCAGCAAGGCGGGTGCAGCTTCGTGTCCCGTTGCCGGCT
GCTTGCACAAGGTCACCATGGGCGACTTGGTCGAGGACAAGGACATGAAG
CGCCGGCGTTGCGGACACACATACGGGAGAGTCGCGATCGCCAACCACAT
CAGGATCAGCAAGGCGGGTGCAGCTTCGTGTCCCGTTGCCGGCTGCTTGC
ACAAGGTCACCATGGGCGACTTGGTCGAGGACAAGGACATGAAGCGCCGG
TTACGGATCGAGGCCGACGCAAACAAAACCCAACGGGGGGAAAACGCCGT
CGAGATCGACGAAGACGATGCGGACGATGTGGGAATGACGTGTATCTAAT
TACGGATCGAGGCCGACGCAAACAAAACCCAACGGGGGGAAAACGCCGTC
GAGATCGACGAAGACGATGCGGACGATGTGGGAATGACGTGTATCTAA
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