prot_L-elsbetiae_contig6539.15240.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6539.15240.1
Unique Nameprot_L-elsbetiae_contig6539.15240.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length123
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.010e-72
Identity = 114/122 (93.44%), Postives = 121/122 (99.18%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            MSGKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK+GKYA+R GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 3.480e-71
Identity = 113/121 (93.39%), Postives = 120/121 (99.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK+GKYA+R GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 1.230e-69
Identity = 111/119 (93.28%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 6.340e-69
Identity = 111/119 (93.28%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 9.900e-68
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKK TSRS+KAGLQFPVGRIGRF+KQGKY++R G GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.740e-64
Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRG KK+T+ S+KAGLQFPVGRIGR+L+QGKYATR GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 199 bits (506), Expect = 6.250e-64
Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGKGGRG---KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            M+GKGKGGRG   KK+TS+SSKAGLQFPV R+GRFLK G+YA R GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKT
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT 122
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 199 bits (505), Expect = 7.070e-64
Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRG KK+T+ S+KAGLQFPVGRIGR+L+QGKYATR GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK+ K
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSGK 122
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 199 bits (506), Expect = 7.350e-64
Identity = 104/120 (86.67%), Postives = 112/120 (93.33%), Query Frame = 0 
Query:    3 GKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            GKGK   GKKA SRS+KAGLQFPVGR+ R+LK+GKYATR GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ KK
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
[Close]
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 199 bits (505), Expect = 1.190e-63
Identity = 104/121 (85.95%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    3 GKGKGGRG--KKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            GKGKGGRG  K+ TS SSKAGLQFPVGRIGR+L+QGKYATR GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKT+K
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKKTIK 130
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6539.15240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.010e-7293.44Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.480e-7193.39Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE1.230e-6993.28Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI6.340e-6993.28Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI9.900e-6890.68Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6U2JFS4_9STRA1.740e-6486.89Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A836CG77_9STRA6.250e-6486.89Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA7.070e-6486.07Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A061QUG5_9CHLO7.350e-6486.67Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
B7FZS7_PHATC1.190e-6385.95Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 72.8
coord: 56..69
score: 90.54
coord: 41..56
score: 85.83
coord: 98..116
score: 76.04
coord: 70..84
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 2.0E-77
score: 273.2
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 1.7E-19
score: 69.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 8.2E-15
score: 55.3
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..122
e-value: 2.8E-61
score: 206.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..120
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..120
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6539contigL-elsbetiae_contig6539:1169..1537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6539.15240.1mRNA_L-elsbetiae_contig6539.15240.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6539 1169..1537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6539.15240.1 ID=prot_L-elsbetiae_contig6539.15240.1|Name=mRNA_L-elsbetiae_contig6539.15240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp
MSGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKQGKYATRTGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKTVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS