prot_L-elsbetiae_contig6537.15237.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6537.15237.1
Unique Nameprot_L-elsbetiae_contig6537.15237.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length348
Homology
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 2.160e-120
Identity = 195/254 (76.77%), Postives = 214/254 (84.25%), Query Frame = 0
Query:   93 IHPSVAWLYPAGASPATERTGSGSNGRERKRRRPSRRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEPSTSMVPLEVLEAAGRKGEAVEDEEREKEREEDAYGEGSRRRFQEMREESARSMAAGEDVVPRKSSRKRRRR 346
            +HPSV+WLYP   S  T    + +  +E K R PSRRTLCVDYGTRRVGLAIGVGISPR VPGVTN GSDLEVARQVLVRARGEGIRDIVVGLPLERNGTET MCE+VRGFASVLADVGA SRP++GVFLWDERFSSAQA AMLDPYGGGMSSKVEIDSLAASL+L+HFFE GGT++AE+V+PST +V  EV  AAGR GE  E++E      EDAYGEGSRRRFQEMREESARS AAGED   R++ RKRRRR
Sbjct:   44 VHPSVSWLYPPKPSSTTAVKTTDTRSQETKTR-PSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGEEGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSARRRAWRKRRRR 296          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD)

HSP 1 Score: 96.3 bits (238), Expect = 9.300e-20
Identity = 68/155 (43.87%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  128 RRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSK-----VE--IDSLAASLVLEHFFEGGGTDSAERVEP 275
            ++TL VDYG RRVGLA+ VGI+PR +  + NRG+  EVAR++   AR E +  +VVGLPL   G E       R F   L      + P   ++LWDERFS+  A   L      MSSK     VE  +DS AA  +LE FFE  G D AE + P
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI----ALPEPPIYLWDERFSTQTARNRL------MSSKTYRNQVENFVDSEAAVAILEDFFENSG-DDAELLYP 165          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK)

HSP 1 Score: 97.4 bits (241), Expect = 1.080e-19
Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  127 SRRTLCVDYGTRRVGLAIGVG-ISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 275
            S R L VDYGT+RVG+AI  G I+PR V  + N G D +V R++   AR E I   VVG+PL+R+G ET    + R F+  LAD   +  P   V++W+E FSS  A ++L     G      +D++AA ++LE +F   G   AE + P
Sbjct:   72 SERVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLAD---EVSPRVPVYVWNEAFSSVAAESLLLHKSRGEIDAC-LDAVAACMILEDYFSEDGW-GAELIPP 216          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 95.5 bits (236), Expect = 1.670e-19
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 0
Query:  129 RTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 275
            RTL VD+G RR GLA+  GI+P  +  + ++ ++L  VA QV+  AR EG   +V+G+P   +G E       R F  +LA   A  RP   V+LWDERFSSA+A +M    G G +    ID +AA+++LE FFEG    SAE + P
Sbjct:   62 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAAP-RP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEGDFA-SAELIAP 203          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 94.0 bits (232), Expect = 7.130e-19
Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 0
Query:  129 RTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEG 264
            RTL VD+G RR GLA+  GI+P  +  + ++ ++L  VA QV+  AR EG   +V+G+P   +G E       R F  +LA   A  RP   V+LWDERFSSA+A +M    G G +    ID +AA+++LE FFEG
Sbjct:   26 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAAP-RP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEG 157          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A0M9UCW6_9CHLR (Putative pre-16S rRNA nuclease n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UCW6_9CHLR)

HSP 1 Score: 89.4 bits (220), Expect = 5.350e-18
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 0
Query:  133 VDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVE-IDSLAASLVLEHFFEGGGTDSAERVEPST 277
            +DYG RRVG+A GVG++PR V  + +   +  +AR V + AR E    I+VGLPL  +G+E       R FA VLA     ++    V+LWDER++S  A   +   G    ++ E +D++AA+++LEH+FE  G   AERV P +
Sbjct:    1 MDYGKRRVGVAAGVGMAPRPVAVLPHGSLESLIARLVEL-ARAEQAAKIIVGLPLNTDGSEGEQAAQCRAFAEVLA-----AQTDIPVYLWDERYTSKDAQQQMIAAGTTQKARREKLDAVAAAVMLEHYFEHQGV-GAERVIPKS 139          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.870e-18
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 0
Query:  127 SRRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKV--EIDSLAASLVLEHFFEGGGTDSAERVEP 275
            +R  L VDYGTRR+GLA+  G SPR V  + + G+  E+  ++L  A+GE    +VVG PL ++G E    +L R F  VLA   A+     GV++ DER+SSA+A A L         ++   +D+ +A  +L  FF      S ER+ P
Sbjct:   56 NRLALGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQDGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQFVSKKSKGRMLAVLDAESACSILRAFFNEPVDSSVERITP 206          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.350e-17
Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 0
Query:  130 TLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 275
            TL VDYG RRVG+ +GVG + R +  V     D++ V  ++L  AR E I  IVVGLPLE++G E   C   R FA  LA     + P++ + LWDERFSS +A A+L    G       +D++AA ++L+ FF      +A    P
Sbjct:   78 TLGVDYGLRRVGVCVGVGFASRPLE-VIEHDEDIDAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALA----AAAPATPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFFASADDGAAAPPAP 214          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 8.430e-15
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0
Query:  128 RRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQA 232
            ++TL VDYG RRVGLA+ VGI+PR +  + NRG+  EVAR++   AR E +  +VVGLPL   G E       R F   L      + P   ++LWDERFS+  A
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI----ALPEPPIYLWDERFSTQTA 122          
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A838RI18_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RI18_9CHLR)

HSP 1 Score: 79.3 bits (194), Expect = 2.880e-14
Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = 0
Query:  130 TLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKV---EIDSLAASLVLEHFFEGGGTDSAERVEP 275
            TL +DYG+ RVG A+ VG   R +  V   GS   +  ++L     E +  IVVGLPL  +GTE     +VRGFA+ LA        +  +FLW+E  SS  A A +   G   S K    ++D++AA+L L+ F E  G   AERV P
Sbjct:    4 TLAIDYGSARVGTAVSVGWMARPLD-VFPHGSIESLLARLLALCTQEQVTKIVVGLPLNADGTEGEQATVVRGFATELAQT-----TNLEIFLWNEYGSSQAAQAQM--IGASRSRKARREKLDAIAAALFLQEFVEQNGV-GAERVYP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK7_ECTSI2.160e-12076.77YqgFc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2ZDD4_9RHOD9.300e-2043.87Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S4D691_HETAK1.080e-1940.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3X7E5_EMIHU1.670e-1942.57Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1ED05_EMIHU7.130e-1943.07YqgFc domain-containing protein n=2 Tax=Emiliania ... [more]
A0A0M9UCW6_9CHLR5.350e-1839.73Putative pre-16S rRNA nuclease n=2 Tax=Ardenticate... [more]
A0A7S2WGV2_9STRA5.870e-1837.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2T1I1_9STRA2.350e-1740.14Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3E813_9RHOD8.430e-1544.76Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A838RI18_9CHLR2.880e-1438.93Putative pre-16S rRNA nuclease n=1 Tax=Ardenticate... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..305
NoneNo IPR availablePANTHERPTHR33317:SF1POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 117..269
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 8.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.669
IPR006641YqgF/RNase H-like domainSMARTSM00732rnase_8scoord: 128..232
e-value: 1.8E-7
score: 40.8
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 127..265
e-value: 3.6E-22
score: 80.9
IPR005227Putative pre-16S rRNA nucleaseTIGRFAMTIGR00250TIGR00250coord: 131..263
e-value: 3.2E-12
score: 44.6
IPR005227Putative pre-16S rRNA nucleasePFAMPF03652RuvXcoord: 129..263
e-value: 4.0E-21
score: 75.8
IPR005227Putative pre-16S rRNA nucleasePANTHERPTHR33317FAMILY NOT NAMEDcoord: 117..269
IPR005227Putative pre-16S rRNA nucleaseHAMAPMF_00651Nuclease_YqgFcoord: 128..266
score: 15.962
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 128..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6537contigL-elsbetiae_contig6537:6991..8556 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6537.15237.1mRNA_L-elsbetiae_contig6537.15237.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6537 6125..8587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6537.15237.1 ID=prot_L-elsbetiae_contig6537.15237.1|Name=mRNA_L-elsbetiae_contig6537.15237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=348bp
MKTRRRSTVTVCFYLFATLLTASCPEGNALGFSITLSTRTRPPTATATAV
RCRASPAASAVDPTEEVDGATEGDVEYHDEEQSGEDDFDDDDIHPSVAWL
YPAGASPATERTGSGSNGRERKRRRPSRRTLCVDYGTRRVGLAIGVGISP
RTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELV
RGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEID
SLAASLVLEHFFEGGGTDSAERVEPSTSMVPLEVLEAAGRKGEAVEDEER
EKEREEDAYGEGSRRRFQEMREESARSMAAGEDVVPRKSSRKRRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006641YqgF/RNaseH-like_dom
IPR037027YqgF/RNaseH-like_dom_sf
IPR005227YqgF
IPR012337RNaseH-like_sf