mRNA_L-elsbetiae_contig6532.15230.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6532.15230.1
Unique NamemRNA_L-elsbetiae_contig6532.15230.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: D8LBQ4_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ4_ECTSI)

HSP 1 Score: 575 bits (1482), Expect = 4.750e-200
Identity = 305/364 (83.79%), Postives = 332/364 (91.21%), Query Frame = 2 
Query:  245 QSEWSSNDLDGDSSLASEASSQVVVDAELPMSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPIIFGLNEPPTNASDAALLNKDREIGELRKELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNNVVEWFQSIGHMQYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRIDVAMQEYRLRFERKQAGDVEEEE-GSDVSGSDTPSELLDXXXXXXXXXXXXXXXXXXXXVDDRDFLNEDELAELQRDEENIEKE 1333
            +SEWSSN  DGDSS+ASEASSQV VDA LPMSP QAAAVIQGMYRRKKARE+FVERVRQ YEKVFDEENDGYFYYN+L+G SQW+ PR+LLGRP DPKEEWA KKVQ LFR+RHAWKKLM +LNSVYEKEYDPDTD+WFYVNKVTKET WDKPI+FGL EPPTN SDAALLNK+REIGEL+KELERQ+ EA +A+K LEDKIA+E+VLKGELDADEAKGRSRHMDEWNV +VVEWFQSIGH QY+KSIREHQVDGLLLLHLMNEDWGHLGI+SPLTVRRIDVAMQEYR+RFERKQAGDV++EE  SDVSGSDTPSELLD    XXXXXX    XXXX  VDD+D+LNEDELAELQRDEENI+KE
Sbjct:   19 RSEWSSNGFDGDSSIASEASSQVEVDAGLPMSPGQAAAVIQGMYRRKKAREYFVERVRQAYEKVFDEENDGYFYYNRLTGTSQWTPPRVLLGRPHDPKEEWAVKKVQGLFRKRHAWKKLMLVLNSVYEKEYDPDTDAWFYVNKVTKETTWDKPILFGLREPPTNTSDAALLNKEREIGELKKELERQKREADEARKALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDASDVSGSDTPSELLDDDDIXXXXXXGQENXXXXVAVDDQDYLNEDELAELQRDEENIKKE 382
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A7S1TPB3_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPB3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 6.850e-46
Identity = 121/334 (36.23%), Postives = 191/334 (57.19%), Query Frame = 2 
Query:  347 QAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPIIFGLNEP-PTNASDAALLNKDREIGELRKELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNNVVEWFQ---SIGHMQYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRIDVAMQEYRLRFERKQAGDVEEEEGSDVSGSDTPSELLDXXXXXXXXXXXXXXXXXXXXVDDRDF-LNEDELAELQRDEENIEKE 1333
            +AA  IQ  +R+  AR   +  +R  YEKV++ + D YFY+N  +  S W  P++L G P DP EE AA  +Q++ RR  A ++   +L    E+ +DP T  +FY + ++ +T WDKP +    E    N +DA L  ++ E+  L++ELE +R   A+ K +  + + E LV + +++  + + RS+HMD+W    V  W     + GH  Y + I +++VDG+L+L+L  E+   +GI S L++RRI+V M++YR+RFER    D +++  SD+S SDTPSELLD                     D  D  + EDEL E++RDE+ I+KE
Sbjct:   57 EAATDIQCAFRKWVARREVLGMIRDHYEKVWEPDYDCYFYFNARTEDSSWEPPKVLRGEPYDPLEEPAAIAIQTMGRRVMAKERARDVLFDRTERVFDPVTKEFFYHDTISDKTFWDKPKLLRPGEDIEANVADATLAEREDEVATLKRELEEERRRFAEFKAKRFNDVRE-LVKQSDIEDAKGRLRSKHMDDWTFQEVSAWLDEDLNCGH--YCELIIQNRVDGVLMLNLNEEELIDMGITSKLSLRRIEVGMRKYRIRFERG-IRDDDDDGLSDMSVSDTPSELLDEEDGQYAESEESDGDGSVQDYDLADLPITEDELVEMRRDEQFIDKE 386
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A7S2FDG9_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDG9_9STRA)

HSP 1 Score: 170 bits (431), Expect = 8.230e-44
Identity = 124/348 (35.63%), Postives = 180/348 (51.72%), Query Frame = 2 
Query:  320 DAELPMSPSQAAAV--IQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPL---DPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPIIFGLNEPPT-----NASDAALLNKDREIGELRKELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNNVVEWFQSIGHM-QYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRIDVAMQEYRLRFERKQAGDVEEEEGSD--VSGSDTPSELLDXXXXXXXXXXXXXXXXXXXXVDDRDFLNEDELAELQRDEENI 1324
            + EL + P   AA   IQ  YR K AR   +E VR  YE VFD E+  YFY+N  +G SQW+ P++L    +   D     AAKK+Q+LFRR+ A+K++ +M+  +Y+KEYDP T  ++Y+N  T ET W+ P    L E  +     +     LL +D+                        +++ EE   K  + A   + RSR MDEW   +V  WF  +  M QY  ++  + VDGLLLL++   D+  +G+ S L  RRI VA ++Y  R+E+K  GDV E++ S+  +SGS+TPSELL+                     DD     E EL EL +D+EN+
Sbjct:   19 EEELEIHPEVLAAAKKIQTRYRIKMARRRILETVRNQYELVFDPESGEYFYFNAKTGESQWTKPKVLKDHEMYADDASANEAAKKIQNLFRRKIAFKRIREMVKGIYKKEYDPSTGDFYYLNTRTGETLWEPPAAHLLGEEGSTDIELDEDSNLLLQRDKXXXXXXXXXXXXXXXXXXXXXXXFEELEEEERGKRLVSALRGQKRSRDMDEWTTEHVCAWFMEMPQMEQYCPAVVANHVDGLLLLNMEASDYEEIGVKSKLHQRRIMVAAKKYIARYEKKMNGDVNEDDDSEYSMSGSETPSELLEEEAGSEIASESEEEATSDE--DDELVPTEAELLELAQDKENM 364
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A836CB63_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB63_9STRA)

HSP 1 Score: 139 bits (351), Expect = 7.160e-33
Identity = 106/328 (32.32%), Postives = 143/328 (43.60%), Query Frame = 2 
Query:  410 RVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPIIFGLNEPPTNASDAALLNKDREIGELRKELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNNVVEWFQSIGHMQYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRIDVAMQEYRLRFERKQAGDVEE---------------EEGSDVSGSDTPSELLDXXXXXXXXXXXXXXXXXXXX-----VDDRDFLNEDELAELQRDEENIEKE 1333
            ++R    + FD ++  Y+Y+N  +  S W+ PRLL G PL P    AA ++Q+ +R   A  +L  +L++VYE+EY  D D+WFY N+ T E  W KP ++G  EPP +  D A+L K+ E  ELR+ LE                    LV  G  DAD+A+GR RHMDEW                                             +P     + V M++YRLRFERKQ G                   +  SD S SDTPSELL                          ++    L++ ELAELQRD  NIEKE
Sbjct:   45 QLRSTVIEEFDAQHARYYYFNAATRESAWAPPRLLRGAPLRPAAAAAALRIQTAWRAHRARARLATLLDAVYEREYSRDADAWFYFNRATGEASWKKPRVYGAREPPAHEGDVAVLEKEAENRELRRRLEDAEAXXXXXXXXXXXXXXXXLVRAGAADADDARGRPRHMDEW---------------------------------------------AP-----VQVGMRKYRLRFERKQRGXXXXXXXXXXXXXXXXXXXDSLSDASASDTPSELLQGTSEGGREYLDEESEGEANRAQAALLEGEAALSDAELAELQRDAANIEKE 322
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A7S3HGK8_9STRA (Peptidylprolyl isomerase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGK8_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.460e-23
Identity = 78/297 (26.26%), Postives = 158/297 (53.20%), Query Frame = 2 
Query:  302 SSQVVVDAELPMSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPIIFGLNEPPTNASDAALLNKDREIGELRKELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNNVVEWFQSIGHMQYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRIDVAMQEYRLRFERKQAGDVEEEEGSDVSGSDTPSEL 1192
            S++VVVD + P     AA  IQ M R   A+       ++V+++V+D     YF++N L+  S W+ P+ +     + +E  A + +Q + R      K  ++ N+ Y + YD + + ++++++ T++T W+        E      D  L +   +I EL  +LE + +E    +K+  +++  E++     +A   K RSR+MDEW  + +  WF  +   +Y   + +++VDGLL ++L  ++W  +GI +   +R++ + ++ YR+R++R++   ++ +E  D+    +PSEL
Sbjct:   11 SAKVVVDVKEP-----AAKKIQCMIRVFLAKIRIRRTAKRVWQRVYDPTYKRYFWFNNLNETSMWTKPKFVEMYYDEDRE--ATQMIQKVIRGFVGRMKARRVANTRYTRFYDANLNKFYWLDQKTQQTTWNVTPWLERQEINMPPEDQMLYDSQTKIRELMAQLEAKDQEIKDIRKKRFEELEPEVIRDKVKNAKSFK-RSRNMDEWKTDELAAWFTELKMDEYVPFLFQNRVDGLLFINLSEDEWPDMGIVNRFHIRKLQLILKSYRVRYQRRK-DKIQVDEDDDLLSEISPSEL 298
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A2D4BSN2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSN2_PYTIN)

HSP 1 Score: 78.6 bits (192), Expect = 3.130e-13
Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 2 
Query:  413 VRQVYEKVFDEENDGYFYYNKLSGISQWSTP-----------RLLLGRPLDPKEEW---AAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPII 709
            VR+ Y++V+D +   YFYYN  +  SQW  P           R    R   P E     AA ++QSLFRRR A   L ++L +VYEK YDP+T S+FY  K T  + W+KP +
Sbjct:    2 VRRAYQRVYDPDXKQYFYYNPRTQXSQWQLPPALQKASALHHRFTSHRKRQPSERTLTAAAIRIQSLFRRRAARLALRRLLATVYEKVYDPETRSYFYFCKQTNTSTWEKPRL 114
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A225WM26_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WM26_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.230e-11
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 2 
Query:  320 DAELPMSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLD---------------------PKEEW----AAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPII 709
            + E+ ++P  AA ++Q  YRRKK  +  +   R VYE+++D E D Y+Y+N  S  + W  P LL G   D                     P  E     AA ++Q L+R + A  +L   L   +++  DP +   +YVN +T+E  WD P +
Sbjct:   52 EREVLLTPELAATMMQRAYRRKKGFQNLLRLCRSVYERIYDPEQDMYYYHNTRSKETTWEKPLLLRGAESDVFTPRSRQKKMHTLMSAVNRTPSRELTEVEAATRLQGLYRAKKAKDELGARLMQRFKQAVDPSSGQVYYVNLLTEEVSWDPPAL 206
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: A0A8J5M2N4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M2N4_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 7.210e-11
Identity = 43/139 (30.94%), Postives = 78/139 (56.12%), Query Frame = 2 
Query:  335 MSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEE--------------WAAKKVQSLFRRRHAWK-KLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPI 706
            MS  +AA+ +Q M+R ++A++   E +   YEK++D   + ++YYN+ +GI++W  P LLLG   D KE               + AK+V   F R    + +L ++L    +K +DP++  ++Y +K+T ++ W KP+
Sbjct:  527 MSRDEAASRLQRMWRTRRAKDELRELLFDAYEKIYDPTTEHFYYYNRKTGIAKWEKPALLLGDGRDIKETKVIKRRRSHTVTAPYEAKQVLFTFMRYSVARLELHRLLRERIQKVFDPNSQQYYYFDKLTGQSSWKKPV 665
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: H3GW77_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GW77_PHYRM)

HSP 1 Score: 74.3 bits (181), Expect = 1.060e-10
Identity = 41/139 (29.50%), Postives = 77/139 (55.40%), Query Frame = 2 
Query:  335 MSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLLLGRPLDPKEEWAAKKVQS---------------LFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPI 706
            MS  +AA+ +Q M+R ++A++   E +   YE++FD   + Y+YYN+ +G+++W  P LL+G   D KE    K+ +S                 R   A  +L ++L +  +K +DP++  ++Y +K+T ++ W KP+
Sbjct:  284 MSRDEAASRLQRMWRTRRAKKELRELLFDAYERIFDPTTEHYYYYNRKTGVAKWEKPALLVGDGRDIKETKIIKRRRSHTVTAPSEAKLVLLTFMRCAAARLELHRLLQARIQKVFDPNSQQYYYFDKLTGQSSWKKPV 422
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BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Match: K3WKB7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKB7_GLOUD)

HSP 1 Score: 73.6 bits (179), Expect = 1.360e-10
Identity = 46/152 (30.26%), Postives = 71/152 (46.71%), Query Frame = 2 
Query:  335 MSPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGISQWSTPRLL------------------------LGRPLDPK---EEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEYDPDTDSWFYVNKVTKETRWDKPII 709
            M+P  AA ++Q  YRRK+  E  +   R VYE+++D   D Y+Y+N  +  + W  P +L                        LG    P+   ++ A   +Q LFR+R A + L   L  VY K  DPD+  ++YVN  T+   W+ P +
Sbjct:  204 MTPEHAATLVQRAYRRKRGFETLLMLCRAVYERIYDPNQDAYYYHNTRTKQTTWEKPAVLRNAQADVFTPRTRQKQQQLETLAHLGDTRKPRVWTQDTAVVCLQGLFRKRQAQRALHARLAQVYRKALDPDSGLFYYVNVETQAVSWEPPAL 355
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6532.15230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ4_ECTSI4.750e-20083.79Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S1TPB3_9STRA6.850e-4636.23Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A7S2FDG9_9STRA8.230e-4435.63Peptidylprolyl isomerase n=1 Tax=Florenciella parv... [more]
A0A836CB63_9STRA7.160e-3332.32Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S3HGK8_9STRA5.460e-2326.26Peptidylprolyl isomerase n=2 Tax=Spumella elongata... [more]
A0A2D4BSN2_PYTIN3.130e-1340.71Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A225WM26_9STRA6.230e-1130.32Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A8J5M2N4_9STRA7.210e-1130.94Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
H3GW77_PHYRM1.060e-1029.50Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
K3WKB7_GLOUD1.360e-1030.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6532contigL-elsbetiae_contig6532:4985..9579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score582.4
Seed ortholog evalue1.5e-163
Seed eggNOG ortholog2880.D8LBQ4
KEGG koko:K09572
Hectar predicted targeting categoryother localisation
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-27_003120.1
Exons9
Model size1333
Cds size1146
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6532.15230.1prot_L-elsbetiae_contig6532.15230.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6532 4985..9392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.4255443-CDS-L-elsbetiae_contig6532:4984..50891622816721.4255443-CDS-L-elsbetiae_contig6532:4984..5089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 4985..5089 -
1691683764.7267988-CDS-L-elsbetiae_contig6532:4984..50891691683764.7267988-CDS-L-elsbetiae_contig6532:4984..5089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 4985..5089 -
1622816721.4377124-CDS-L-elsbetiae_contig6532:5504..56031622816721.4377124-CDS-L-elsbetiae_contig6532:5504..5603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 5505..5603 -
1691683764.7398438-CDS-L-elsbetiae_contig6532:5504..56031691683764.7398438-CDS-L-elsbetiae_contig6532:5504..5603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 5505..5603 -
1622816721.4502304-CDS-L-elsbetiae_contig6532:5955..60841622816721.4502304-CDS-L-elsbetiae_contig6532:5955..6084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 5956..6084 -
1691683764.7505105-CDS-L-elsbetiae_contig6532:5955..60841691683764.7505105-CDS-L-elsbetiae_contig6532:5955..6084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 5956..6084 -
1622816721.464944-CDS-L-elsbetiae_contig6532:6311..64191622816721.464944-CDS-L-elsbetiae_contig6532:6311..6419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 6312..6419 -
1691683764.7589586-CDS-L-elsbetiae_contig6532:6311..64191691683764.7589586-CDS-L-elsbetiae_contig6532:6311..6419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 6312..6419 -
1622816721.4785273-CDS-L-elsbetiae_contig6532:7356..74801622816721.4785273-CDS-L-elsbetiae_contig6532:7356..7480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 7357..7480 -
1691683764.7673118-CDS-L-elsbetiae_contig6532:7356..74801691683764.7673118-CDS-L-elsbetiae_contig6532:7356..7480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 7357..7480 -
1622816721.4926476-CDS-L-elsbetiae_contig6532:7791..78861622816721.4926476-CDS-L-elsbetiae_contig6532:7791..7886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 7792..7886 -
1691683764.775643-CDS-L-elsbetiae_contig6532:7791..78861691683764.775643-CDS-L-elsbetiae_contig6532:7791..7886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 7792..7886 -
1622816721.5053816-CDS-L-elsbetiae_contig6532:8175..83101622816721.5053816-CDS-L-elsbetiae_contig6532:8175..8310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 8176..8310 -
1691683764.783933-CDS-L-elsbetiae_contig6532:8175..83101691683764.783933-CDS-L-elsbetiae_contig6532:8175..8310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 8176..8310 -
1622816721.519849-CDS-L-elsbetiae_contig6532:8651..88201622816721.519849-CDS-L-elsbetiae_contig6532:8651..8820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 8652..8820 -
1691683764.7943377-CDS-L-elsbetiae_contig6532:8651..88201691683764.7943377-CDS-L-elsbetiae_contig6532:8651..8820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 8652..8820 -
1622816721.5328922-CDS-L-elsbetiae_contig6532:9210..93921622816721.5328922-CDS-L-elsbetiae_contig6532:9210..9392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 9211..9392 -
1691683764.8045192-CDS-L-elsbetiae_contig6532:9210..93921691683764.8045192-CDS-L-elsbetiae_contig6532:9210..9392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6532 9211..9392 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816721.543185-UTR-L-elsbetiae_contig6532:9392..95791622816721.543185-UTR-L-elsbetiae_contig6532:9392..9579Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6532 9393..9579 -
1691683764.8148706-UTR-L-elsbetiae_contig6532:9392..95791691683764.8148706-UTR-L-elsbetiae_contig6532:9392..9579Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6532 9393..9579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6532.15230.1

>prot_L-elsbetiae_contig6532.15230.1 ID=prot_L-elsbetiae_contig6532.15230.1|Name=mRNA_L-elsbetiae_contig6532.15230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=382bp
MARYSDSDSRNNDDDDDDDQSEWSSNDLDGDSSLASEASSQVVVDAELPM
SPSQAAAVIQGMYRRKKAREFFVERVRQVYEKVFDEENDGYFYYNKLSGI
SQWSTPRLLLGRPLDPKEEWAAKKVQSLFRRRHAWKKLMKMLNSVYEKEY
DPDTDSWFYVNKVTKETRWDKPIIFGLNEPPTNASDAALLNKDREIGELR
KELERQREEAAKAKKELEDKIAEELVLKGELDADEAKGRSRHMDEWNVNN
VVEWFQSIGHMQYEKSIREHQVDGLLLLHLMNEDWGHLGINSPLTVRRID
VAMQEYRLRFERKQAGDVEEEEGSDVSGSDTPSELLDDDDMYDDDDDSGQ
DEEDDVVVDDRDFLNEDELAELQRDEENIEKE
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mRNA from alignment at L-elsbetiae_contig6532:4985..9579-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6532.15230.1 ID=mRNA_L-elsbetiae_contig6532.15230.1|Name=mRNA_L-elsbetiae_contig6532.15230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4595bp|location=Sequence derived from alignment at L-elsbetiae_contig6532:4985..9579- (Laminarionema elsbetiae ELsaHSoW15)
GTTTCTTACTCGGAGCTTTCTTACTAGCGGGCCGGTACTACTGTACGTAC
ACACAGGTACTGCTGTATCTAGTCTCGATAGATACGTGAGACGGGATTTG
AGAACGAATACCGTCCGTACACGCCTTTTGATTTGTTAGGCACTAGGAGA
CATAGGCCGAATATCTCCTGCGTATGTGAAATAGCATATGGCACGCTACA
GCGATTCGGACTCACGGAACAACGATGACGACGACGACGATGACCAGTCG
GAGTGGTCCTCCAATGACTTGGATGGCGACAGCAGCCTTGCTTCAGAGGC
ATCGTCTCAGGTTGTGGTGGACGCGGAGCTTCCCATGTCTCCTTCGCAAG
CCGCCGCCGTCATTCAAGGGTGAGCCCAGCAGCCAGTAACTGTCCAGGCG
CCTAAATCTATTTGGACGTATTTTCTTCCCGAAATTGGGTGCGCACTTGA
TGCCAAAAGCTCACACTACTCGCCGTATCGTTAGGTGCCTCGCGGGCCTG
CGGAGAGTCCTTTGTCCTATTTATCCGCATTGGCAGCCATCTGCTCTGTT
TTTGAGTACAACGGCGGTCCTGCATGAATTACTACGTGCTGCCTTCTTGT
CGTACTGGGAAAGAAAGTTCAGCGCAGTCTCCTACATGCACATTTTCATC
GCCACTTCGCTGCCGAGTATCGCCGTCAGGCTTCGAACGCACAAACGTGG
TTGATGGTTTCGCCGTGTGCCCGACCGCTGATAAACTATGCAACAACGTC
ACTTTTTAGGATGTACCGACGAAAAAAGGCGAGGGAGTTCTTTGTGGAGC
GCGTTCGACAAGTGTACGAGAAAGTCTTTGACGAGGAAAACGACGGGTAT
TTCTACTACAACAAGCTCAGTGGCATCAGCCAGTGGAGCACGCCGAGGCT
TCTCCTGGGACGTCCTCTCGATCCAAAGGTGGGGTGCGCGACAACACGTT
GAGAGCTTTCGGGAAGCGAACAAGTGCACGCCGTGGCCAGAATGTGTATC
ACCAGTGCTTACACGACTCTGTGTTGGTTGTAAGCACAGCACTCCTGTGG
CATGTAGCATACCTAGCTCTGGACGGTTGCACGTATTTCGGCGGGATGAG
CACATCCTTTAGAGTTGAGCCGCATGGAATGGAATAGTCTAGTCTCAGAA
CTTCCGGGGTCATCTGTTTGGATGGCAGCCGCTGCAGGACGTTTCTCAAT
CTCTGTTGTGATATTGTCCCGCCTTATCTTGCCGCGTTTTCCTTTGTTGT
ATTCTGTCTTATTTCACAGGAGGAGTGGGCGGCGAAAAAAGTGCAGAGTT
TGTTTCGGCGAAGACATGCTTGGAAGAAGCTCATGAAAATGCTGAACAGC
GTATACGAGAAAGAGTACGACCCAGATACGGACAGCTGGTTTTACGTCAA
CAAGGTGTGACACCTCAGTCTCTACTCTGCTAGGTTGTAAGGTGACATGC
AGCGGATGCATCAGCTTTACCAGTTCCACGGACCAAAGCTACAATGGCCG
TCCATATCGCTGAATCGCTCCTATGAGGGACTCGGTCATGGAAAAACAGG
CCTTGTGCATGAGTTCACGTGCGACGGAATCGAAGGTGTCTACTGGCTAG
CCTGTCGGAGACTAGCGTGGGCAATAGCACTGACGGCCCTCTACCGCCGT
GTTATTTCCCGTGCGATCCCTGACCGCGATGATATTGATGCAGGTGACGA
AAGAAACAAGGTGGGACAAGCCGATTATTTTCGGGCTCAACGAACCGCCG
ACGAACGCGAGCGATGCCGCTCTGCTCAACAAGGATCGGTGAGTGGGTGT
TCTTCGAGGTCTGTGGTTTTGGTGGAAACGTGGTGTCTGCACTTTCTTAA
CTCACAAACCATGTCTACCCACTCAATTCTCATGCTGTCGCGAGAACATG
GTTACCATCTGGGGGGAAAGACAACTCCAAACGAATATGGCGTTCAAGAA
GCTCGACCCCCCTCCCCCACGAGCTTCTACTGGTTCAGGACTTTCTACCC
TAAAGAAACAACCGATCAAGACGTATTATCGGTGCTCATATATATGCCCC
CGCCGTGAGCTTTACTAACTTTGGCTTGATTTTTGCTACGATGTTCCAGA
GAGATTGGAGAGCTGAGAAAGGAGCTGGAGAGACAGAGAGAAGAGGCCGC
GAAAGCGAAGAAAGAGTTGGAAGACAAGATTGCCGAGGAGCTGGTGTTGA
AAGGGGAGCTAGACGCCGATGAGGTGAGACGTGCCAAGCTGATAGCGTGG
TGGTAGCGAGCTGCCTTGTCAGCGATGGGTAGACGCACGAGGGAGGTGAG
TATGCATTCGTTGTAATAAGCGGCTGGAAAGCACTTGGCTGTCTGAGATG
TTTGTGGCTCGTGGACGATGCACTGTCTTCCGCCATGCGCTGCGGCCGAA
AGTGGTGCAGCTGTGTGTACGTGTGTACTAGTACCACCAGTGAGATATGA
CGACTTGGAATAGTATTCCTCCCAAAGCTTGCGCACGTTTGGAAAGCTTG
CCCAGGATGTGAACCTCAGACAATCGAAGTGTATCACCATACATATGCGG
GTTTTAGAACGCCGTGATGCGACTATTTCCCTTGAGCTGGGTTGGGGTTC
TCCAACCCGTCCAACATTATGTGCCTCGGCTGCCTGAACTTTGCACGAGC
AAGCGGACAGACCGGCTCGTTGGGGATGCTTTGAAGACTTAATCGCTCCC
TCTGAACGTTCTCACCAGCATTTGGTCACTCAGAATACCCTTACCAAGCC
ATGGTAGAACTCGGTTGGGTGCCGCATGGAGTGCCGCAAACACGGCAAAT
GCTGACTACAGCTCGCTCAACCCTCATGAAACGCAGCCCTGGACCGCGCA
ACAAGCACCCCGAGAGTATTTTTCTCCGTCCCGGTTTCGAATGGATGCGA
GACAAAGCGTCTAACGACTAGGACTTGCATTTTGTTTTAGGTAAATGTTG
GCTGGTGGATGGTATTTAGCGTTGCGCCGAATAAGGACAACCACCACTCA
CCAGCCATGCGTGCGGTCCTCCCCCAACGCGATTGACGACCGGAGTAACT
GGCGGGGACCAGCTGGCTTCCTTTCCCTTCACTTTCACCATCCTATTCCC
CCGTGCACTTCGATCGCCGCCCGTCCGTCCGTCGTCCCGCACGGAAAACG
AACGCGTCAGGCGAAGGGGAGAAGCAGGCACATGGACGAATGGAACGTGA
ATAATGTGGTGGAGTGGTTTCAAAGCATCGGCCACATGCAGTACGAAAAG
AGTATCAGAGAGCACCAGGTGGGCGAAGAAGAGCTGGGGGTAGGTATGCC
TGTTTTGTGTGACGCTCCAAATAGCTGTCGGTTCGCATCACGGTGTATTT
CACAAGGAAAACGTGAAGGGGTAGATTCTAGTACAGATCCACGCGTCTGC
TGTTGAGTGGTCGACGTTGCAAGCAGAATCCCTCTGGTGGTATTTCTGTG
TGCCTAAAGCTATGTACCTGCACTTTTTGCCTACCTGCCACGAAGGTTGA
CGGGTTGCTGCTGCTTCACCTCATGAACGAGGACTGGGGGCACCTGGGCA
TCAACAGCCCGCTGACCGTGCGTCGCATCGATGTCGCAATGCAGGAGTAC
CGGTTACGGTTCGAGCGCAAACAGGTAAAAGAGGAATGCCATGTGATTGA
TCGATCGAAAACCAGAACGAAAAGATACGCAGAAGTTTAGTTCGAGGTAC
AAGTGGGGCGTTCAGAGACAGCAGCTCTCGTGTGCCTCGGAACAAAACCG
GCGCCAAGCGTCAAACCGCCGCGGATGTACCGTGAGACTGGTGGCTTTCA
CGTTCTCCCCCAAGAAGCTCAACGGCACCTCGACACTGGCCGGCTCTTGC
AGCTATCGTTGATGCTGCGAAGCGAAGTTTAATTTTGTTTTTCTGCATGC
AGAACCGCAAATAGGCGCTGATTCCTCGTTCGTCGTCGGCATATTCTCCC
CTGTTCGCATGCATGCAACCCACCAGGCCGGGGACGTCGAGGAGGAAGAA
GGGTCTGACGTGAGCGGCTCTGACACGCCGTCCGAGCTCCTGGACGACGA
CGATATGTACGACGACGACGACGACGTGAGAAAAACCGGCTGTGATACAT
AGATGGAAACGTACACACACACACACACACACACACACACACACACACTC
GAGCACCAAGTAGGGCGTGTGGTTTCAAGTTCGTTTCGACTCTCGTGCGA
ACAAGAGAGCGCTCACGACGGCGTGGAATTTTTCAATTGGTTATATTGTA
GACCAAACGTTGGAATAGTACTTCAACTTCTATTTCTAACACGATTCACA
CTCTTAGCAGTATGTATTTGAGCAGTCAGCCGAAGAGCACGAGACCACCT
GTCGTGAGCACAGAATCAATCCCGCACGCGGATGTTACAATAGGTACTTG
TGTGCGGCGCGTTCAACGAAAAAGTGTTCTACTCGACTATTTGGCACCGT
TATATTGTATTTTGTCTGTTGTGCTCTAACCCGTCTCAAGTCGGGCCAGG
ACGAGGAAGACGACGTGGTCGTCGACGATCGGGATTTCCTGAACGAAGAC
GAGCTCGCGGAGCTGCAACGGGACGAAGAGAACATAGAGAAAGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6532:4985..9579-

>mRNA_L-elsbetiae_contig6532.15230.1 ID=mRNA_L-elsbetiae_contig6532.15230.1|Name=mRNA_L-elsbetiae_contig6532.15230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2292bp|location=Sequence derived from alignment at L-elsbetiae_contig6532:4985..9579- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCACGCTACAGCGATTCGGACTCACGGAACAACGATGACGACGACGA
CGATGACCAGTCGGAGTGGTCCTCCAATGACTTGGATGGCGACAGCAGCC
TTGCTTCAGAGGCATCGTCTCAGGTTGTGGTGGACGCGGAGCTTCCCATG
TCTCCTTCGCAAGCCGCCGCCGTCATTCAAGGATGGCACGCTACAGCGAT
TCGGACTCACGGAACAACGATGACGACGACGACGATGACCAGTCGGAGTG
GTCCTCCAATGACTTGGATGGCGACAGCAGCCTTGCTTCAGAGGCATCGT
CTCAGGTTGTGGTGGACGCGGAGCTTCCCATGTCTCCTTCGCAAGCCGCC
GCCGTCATTCAAGGGATGTACCGACGAAAAAAGGCGAGGGAGTTCTTTGT
GGAGCGCGTTCGACAAGTGTACGAGAAAGTCTTTGACGAGGAAAACGACG
GGTATTTCTACTACAACAAGCTCAGTGGCATCAGCCAGTGGAGCACGCCG
AGGCTTCTCCTGGGACGTCCTCTCGATCCAAAGGATGTACCGACGAAAAA
AGGCGAGGGAGTTCTTTGTGGAGCGCGTTCGACAAGTGTACGAGAAAGTC
TTTGACGAGGAAAACGACGGGTATTTCTACTACAACAAGCTCAGTGGCAT
CAGCCAGTGGAGCACGCCGAGGCTTCTCCTGGGACGTCCTCTCGATCCAA
AGGAGGAGTGGGCGGCGAAAAAAGTGCAGAGTTTGTTTCGGCGAAGACAT
GCTTGGAAGAAGCTCATGAAAATGCTGAACAGCGTATACGAGAAAGAGTA
CGACCCAGATACGGACAGCTGGTTTTACGTCAACAAGGAGGAGTGGGCGG
CGAAAAAAGTGCAGAGTTTGTTTCGGCGAAGACATGCTTGGAAGAAGCTC
ATGAAAATGCTGAACAGCGTATACGAGAAAGAGTACGACCCAGATACGGA
CAGCTGGTTTTACGTCAACAAGGTGACGAAAGAAACAAGGTGGGACAAGC
CGATTATTTTCGGGCTCAACGAACCGCCGACGAACGCGAGCGATGCCGCT
CTGCTCAACAAGGATCGGTGACGAAAGAAACAAGGTGGGACAAGCCGATT
ATTTTCGGGCTCAACGAACCGCCGACGAACGCGAGCGATGCCGCTCTGCT
CAACAAGGATCGAGAGATTGGAGAGCTGAGAAAGGAGCTGGAGAGACAGA
GAGAAGAGGCCGCGAAAGCGAAGAAAGAGTTGGAAGACAAGATTGCCGAG
GAGCTGGTGTTGAAAGGGGAGCTAGACGCCGATGAGAGAGATTGGAGAGC
TGAGAAAGGAGCTGGAGAGACAGAGAGAAGAGGCCGCGAAAGCGAAGAAA
GAGTTGGAAGACAAGATTGCCGAGGAGCTGGTGTTGAAAGGGGAGCTAGA
CGCCGATGAGGCGAAGGGGAGAAGCAGGCACATGGACGAATGGAACGTGA
ATAATGTGGTGGAGTGGTTTCAAAGCATCGGCCACATGCAGTACGAAAAG
AGTATCAGAGAGCACCAGGCGAAGGGGAGAAGCAGGCACATGGACGAATG
GAACGTGAATAATGTGGTGGAGTGGTTTCAAAGCATCGGCCACATGCAGT
ACGAAAAGAGTATCAGAGAGCACCAGGTTGACGGGTTGCTGCTGCTTCAC
CTCATGAACGAGGACTGGGGGCACCTGGGCATCAACAGCCCGCTGACCGT
GCGTCGCATCGATGTCGCAATGCAGGAGTACCGGTTACGGTTCGAGCGCA
AACAGGTTGACGGGTTGCTGCTGCTTCACCTCATGAACGAGGACTGGGGG
CACCTGGGCATCAACAGCCCGCTGACCGTGCGTCGCATCGATGTCGCAAT
GCAGGAGTACCGGTTACGGTTCGAGCGCAAACAGGCCGGGGACGTCGAGG
AGGAAGAAGGGTCTGACGTGAGCGGCTCTGACACGCCGTCCGAGCTCCTG
GACGACGACGATATGTACGACGACGACGACGACGCCGGGGACGTCGAGGA
GGAAGAAGGGTCTGACGTGAGCGGCTCTGACACGCCGTCCGAGCTCCTGG
ACGACGACGATATGTACGACGACGACGACGACTCGGGCCAGGACGAGGAA
GACGACGTGGTCGTCGACGATCGGGATTTCCTGAACGAAGACGAGCTCGC
GGAGCTGCAACGGGACGAAGAGAACATAGAGAAAGAGTCGGGCCAGGACG
AGGAAGACGACGTGGTCGTCGACGATCGGGATTTCCTGAACGAAGACGAG
CTCGCGGAGCTGCAACGGGACGAAGAGAACATAGAGAAAGAG
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