prot_L-elsbetiae_contig6529.15225.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6529.15225.1
Unique Nameprot_L-elsbetiae_contig6529.15225.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length231
Homology
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BLAST of mRNA_L-elsbetiae_contig6529.15225.1 vs. uniprot
Match: D8LKH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH5_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.510e-57
Identity = 99/140 (70.71%), Postives = 111/140 (79.29%), Query Frame = 0 
Query:   82 ILRQVIDVLTDPASAGQGGRPDEPLLLVRKLALDETDAVFGAFESRFLRYAADAGSWSPLPGGFNRWMERYHREVLRGSRPVLVTVHGDDVCALEKELSLKAR--TEAAGVSVADNIEGATVGEEPSAATLAQTRRQGTD 219
            +LRQV+ VLTDP SAG GGRPDEPLLLV+KLALDETDA+FGAFE RFL YAADAGSWSPLPGGF+RW+ RYHR  L GSRPVL TVHGDDVCALEKEL L  R  +EA GV+  D I+   + EEP A+  A  RRQ T+
Sbjct:    1 MLRQVVKVLTDPTSAGLGGRPDEPLLLVQKLALDETDAIFGAFEPRFLGYAADAGSWSPLPGGFSRWLARYHRVALHGSRPVLATVHGDDVCALEKELYLGVRVPSEAGGVTPNDIIDS--IAEEPPASASAGFRRQATN 138
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6529.15225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKH5_ECTSI1.510e-5770.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..231
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6529contigL-elsbetiae_contig6529:8829..10735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6529.15225.1mRNA_L-elsbetiae_contig6529.15225.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6529 7604..10735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6529.15225.1 ID=prot_L-elsbetiae_contig6529.15225.1|Name=mRNA_L-elsbetiae_contig6529.15225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MNRAFQFNSRALLRATCLGAGAAVCSLFLAGSGSAPRDRGTPVAAINAGG
GVCSPLEVVGLDSCPDMKYQVVRKLLAAKADILRQVIDVLTDPASAGQGG
RPDEPLLLVRKLALDETDAVFGAFESRFLRYAADAGSWSPLPGGFNRWME
RYHREVLRGSRPVLVTVHGDDVCALEKELSLKARTEAAGVSVADNIEGAT
VGEEPSAATLAQTRRQGTDGGGGGGGGGGDH
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