mRNA_L-elsbetiae_contig6528.15223.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6528.15223.1
Unique NamemRNA_L-elsbetiae_contig6528.15223.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: D8LLC3_ECTSI (3-oxoacyl-[acyl-carrier-protein] synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC3_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 1.310e-150
Identity = 224/250 (89.60%), Postives = 236/250 (94.40%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRRSLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVR-GDLDAVMSNSFGFGGTNVSLLFSR 747
            C   AHAIGDA+RFIKHGDADVMVCGGSEGS+HEPALAGFARMNALSTRFN +PERASRPFD+DRDGFVLA EGAAVLVLEE++HARDRGANI+AEVRGYG  GDAHHIAAPTEDGDGPRRAML+A+EESGLS E+VGYVNAHATSTPLGDAAEGRAIERVFG R+SLLVSSTKGATGHLLGAAGSLEAAFSILA+RDGVVPHTLNL TPDP FGFTMVK APVR  DLDAVMSNSFGFGGTNVSLLFSR
Sbjct:  197 CATGAHAIGDAFRFIKHGDADVMVCGGSEGSIHEPALAGFARMNALSTRFNEDPERASRPFDKDRDGFVLA-EGAAVLVLEEMEHARDRGANIIAEVRGYGLAGDAHHIAAPTEDGDGPRRAMLSAVEESGLSPESVGYVNAHATSTPLGDAAEGRAIERVFGKRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTLNLATPDPTFGFTMVKGAPVRVDDLDAVMSNSFGFGGTNVSLLFSR 445          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: K3WGD3_GLOUD (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGD3_GLOUD)

HSP 1 Score: 285 bits (728), Expect = 4.510e-91
Identity = 148/250 (59.20%), Postives = 182/250 (72.80%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRRSLL-VSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C   +H+IGDA+RFI+HGDADVMV GG+E S++E ++ GF R  ALST+FN  P  ASRPFD  RDGFV+  EGA ++VLEE +HA+ RGA I AEVRGYG +GD+HH+ AP E+GDG RRAM AAI +SGL+   +GY+NAHATSTPLGD AE  A++ +FG     L  SSTKGA GHLLGAAG++EA F+I A+   V+P TLNL      F    V N P   +L AV+SNSFGFGGTN SL FS+
Sbjct:  201 CATGSHSIGDAFRFIRHGDADVMVAGGTEASINEISICGFLRSQALSTKFNDRPAEASRPFDTQRDGFVMG-EGAGIVVLEEYEHAKKRGARIYAEVRGYGLSGDSHHMTAPPENGDGARRAMKAAIAQSGLALSDIGYINAHATSTPLGDRAENSAVKDLFGDHAQHLGFSSTKGAVGHLLGAAGAVEAIFAIKALHHNVMPPTLNLHETTEEFTLNYVPNQPQEKELHAVLSNSFGFGGTNSSLCFSK 449          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: UPI0018AEBA22 (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEBA22)

HSP 1 Score: 280 bits (715), Expect = 2.680e-90
Identity = 151/252 (59.92%), Postives = 182/252 (72.22%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRRS---LLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAF-GFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFS 744
            C   AH+IGDA R I+ GDADVMV GG+E S+   ++AGF R  AL+T++N  PE +SRPFD DRDGFV+A EG+ V+VLEE+DHA++RGA I AEVRGYG +GDAHHI  P  +G G   AM  A+E+SGLS   V Y+NAHATSTPLGD AE  AI  VF    +   L +SSTKGATGHLLGAAGS+EA F++LA+  G+ P TLNL  PDP F G  M  +AP    + A +SNSFGFGGTN SLLFS
Sbjct:  105 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSIAGFCRSKALATKYNSLPEASSRPFDCDRDGFVIA-EGSGVMVLEELDHAKERGAKIYAEVRGYGMSGDAHHITQPHIEGKGAMLAMTRALEQSGLSPNQVDYINAHATSTPLGDVAEANAIGSVFSDHSTSGALALSSTKGATGHLLGAAGSVEAIFAVLAIHHGIAPPTLNLQKPDPVFHGGFMPLSAPREMPIRAALSNSFGFGGTNASLLFS 355          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A1V9Y7T6_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7T6_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.780e-89
Identity = 143/250 (57.20%), Postives = 182/250 (72.80%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRR-SLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C   +H+IGDAYRFI++GDADVMV GG+E S++  ++ GF R  AL+T+FN +P  ASRPFD  RDGFV+  EGA +  LEE +HA+ RGA I  E+RGYG +GDAHH+ APTE+GDG  RAM +AI++SGL    +GY+NAHATSTPLGD AE RAI+R+FG    +L VSSTKGA GHLLGAAG++EA F+I A+ + V+P TLNL      F    V        ++AV+SNSFGFGGTN SL F++
Sbjct:   16 CATGSHSIGDAYRFIRNGDADVMVAGGTEASLNALSMCGFLRAKALATKFNDKPSEASRPFDAHRDGFVMG-EGAGICFLEEYEHAKARGAKIYGEIRGYGLSGDAHHLTAPTENGDGAFRAMESAIKQSGLQPSDIGYINAHATSTPLGDTAENRAIKRLFGQHAYNLSVSSTKGAVGHLLGAAGAVEAIFAIKALHENVLPPTLNLHEMTEEFDLDYVPLEAKNRTVNAVLSNSFGFGGTNSSLCFAK 264          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A218Z7H0_9HELO (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218Z7H0_9HELO)

HSP 1 Score: 279 bits (713), Expect = 4.580e-89
Identity = 146/255 (57.25%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVF------GPRRSLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C   AHAIGDA RFI  GDADVM+ GGSE  +H  ALAGFAR  +L+T FN +P ++SRPFD DR GFV+A EGA V+VLEE++HA+ RGA I AEVRGYG +GDA+H+ AP EDG G   AM  A++ +G+S + V Y+NAHATSTPLGDAAE  AI+R+F           + VSSTKGA GHLLGA+G++EA FSILAV++ ++P TLN+   DP F    + N      +D  +SNSFGFGGTN SL FS+
Sbjct:  174 CTTGAHAIGDASRFIAFGDADVMIAGGSESCIHPLALAGFARSRSLATSFNDDPSKSSRPFDRDRCGFVIA-EGAGVVVLEELEHAKRRGAEIYAEVRGYGCSGDAYHVTAPREDGAGALLAMRRALKNAGISPKDVDYINAHATSTPLGDAAENSAIKRLFLGEEGYEKETDIAVSSTKGAIGHLLGASGAIEAIFSILAVKENIMPPTLNIYNKDPGFNCNYISNTSQHKIVDVSLSNSFGFGGTNASLAFSK 427          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A5B2VDK0_9HYPH (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2VDK0_9HYPH)

HSP 1 Score: 278 bits (712), Expect = 4.980e-89
Identity = 148/251 (58.96%), Postives = 180/251 (71.71%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFG-PRRSLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSRA 750
            C   AHAIGDA R +  GDADVMV GG+E  ++  ALAGFA   ALSTRFN EP RASRP+D DRDGFV+  EGA V+VLEE +HA+ RGA I AEV GYG +GDA HI +P+EDGDG  R M AA++ +G+S   + Y+NAH TSTPLGD  E RA+ER+ G    +L +SSTK + GHLLGAAG++EA FS+LA+RDG+VP TLNL  P       +      R D+D V+SNSFGFGGTN SL+F RA
Sbjct:  170 CSTGAHAIGDAARLVALGDADVMVAGGTESPINRLALAGFASCRALSTRFNDEPTRASRPYDRDRDGFVMG-EGAGVVVLEEYEHAKARGAKIYAEVVGYGLSGDAFHITSPSEDGDGAYRCMQAALKRAGISPSDIDYINAHGTSTPLGDEIELRAVERLVGNAAATLAMSSTKSSVGHLLGAAGAVEAIFSVLAMRDGIVPPTLNLDHPSVETPIDLSPREAKRRDIDVVLSNSFGFGGTNASLVFRRA 419          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A176W5L2_MARPO (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W5L2_MARPO)

HSP 1 Score: 280 bits (717), Expect = 5.500e-89
Identity = 151/254 (59.45%), Postives = 187/254 (73.62%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRRS---LLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFG--FTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C   AH+IGDA+R I+ GDADVMV GGSE S+   ++AGF R  ALS++FN +P+R+SRPFD DRDGFV+  EGA +LVLEE+DHA+ RGA I AEVRGYG +GDA+HI  P+ DG G   AM  A+++SGL    + Y+NAHATSTPLGDA E +A++ VF    S   L+ SSTKGATGHLLGAAG++EA FSILA+  GV P TLNL+ PDP F   FT + +    G L AV++NSFGFGGTN SL+FS 
Sbjct:  232 CASGAHSIGDAFRMIRFGDADVMVAGGSESSIDALSMAGFCRARALSSKFNDDPQRSSRPFDRDRDGFVMG-EGAGILVLEELDHAQQRGAKIYAEVRGYGMSGDAYHITQPSGDGRGAILAMTRALQQSGLQPYEIDYINAHATSTPLGDAIEAKAMKAVFKEHASTGELVFSSTKGATGHLLGAAGAVEAIFSILALHHGVAPPTLNLSEPDPIFSDNFTPLTSPKELG-LRAVLTNSFGFGGTNASLVFSH 483          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A7V4SMJ9_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V4SMJ9_9BACT)

HSP 1 Score: 278 bits (711), Expect = 5.900e-89
Identity = 152/250 (60.80%), Postives = 184/250 (73.60%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPR-RSLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C  S+HAIG+A R+I+ G+ADVM+ GG+E +V   ++AGFA M ALSTR N EP+RASRPFD DRDGFV+  EGAA+L+LE++D AR RGA ILAE+ GYG +GDA+HI+AP+EDGDGP R M  AI ++GL  E V YVNAH TSTP+GD  E  A++RVFG   R L VSSTK  TGHLLGAAGSLEAA +ILA+RD V P T+NL TPDP      V N      +   +SNSFGFGGTN  L+ SR
Sbjct:  163 CATSSHAIGEAARYIQRGEADVMIAGGAEAAVTALSVAGFASMRALSTR-NEEPQRASRPFDADRDGFVMG-EGAAILILEDMDLARKRGAPILAEIVGYGLSGDAYHISAPSEDGDGPARVMANAIRDAGLKPEDVDYVNAHGTSTPIGDRIEVLALKRVFGEHARKLAVSSTKSMTGHLLGAAGSLEAALTILAIRDQVAPPTVNLETPDPECDLDFVPNEARPMPIRYGLSNSFGFGGTNACLILSR 410          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: UPI001929AA47 (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929AA47)

HSP 1 Score: 280 bits (715), Expect = 7.020e-89
Identity = 151/252 (59.92%), Postives = 182/252 (72.22%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRRS---LLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAF-GFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFS 744
            C   AH+IGDA R I+ GDADVMV GG+E S+   ++AGF R  AL+T++N  PE +SRPFD DRDGFV+A EG+ V+VLEE+DHA++RGA I AEVRGYG +GDAHHI  P  +G G   AM  A+E+SGLS   V Y+NAHATSTPLGD AE  AI  VF    +   L +SSTKGATGHLLGAAGS+EA F++LA+  G+ P TLNL  PDP F G  M  +AP    + A +SNSFGFGGTN SLLFS
Sbjct:  215 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSIAGFCRSKALATKYNSLPEASSRPFDCDRDGFVIA-EGSGVMVLEELDHAKERGAKIYAEVRGYGMSGDAHHITQPHIEGKGAMLAMTRALEQSGLSPNQVDYINAHATSTPLGDVAEANAIGSVFSDHSTSGALALSSTKGATGHLLGAAGSVEAIFAVLAIHHGIAPPTLNLQKPDPVFHGGFMPLSAPREMPIRAALSNSFGFGGTNASLLFS 465          
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Match: A0A067BXC2_SAPPC (Beta-ketoacyl-[acyl-carrier-protein] synthase I (Fragment) n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXC2_SAPPC)

HSP 1 Score: 278 bits (711), Expect = 7.470e-89
Identity = 146/250 (58.40%), Postives = 183/250 (73.20%), Query Frame = 1
Query:    1 CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRFNGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGYGATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLGDAAEGRAIERVFGPRR-SLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGVVPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSR 747
            C   +H+IGDAYRFI++GDADVMV GGSE S++  ++ GF R  AL+T+FN  PE ASRPFD  RDGFV+  EGA V  LEE +HA+ RGA I  E+RGYG +GDAHH+ APTE+GDG  RAM +A+ +SGL+   +GY+NAHATSTPLGDAAE RAI+R+FG    +L VSSTKGA GHLLGAAG++EA F+I A+ + V+P TLNL      F    V        ++AV+SNSFGFGGTN SL F++
Sbjct:  173 CATGSHSIGDAYRFIRNGDADVMVAGGSEASLNPLSVCGFLRAKALATKFNDNPEAASRPFDAQRDGFVMG-EGAGVCFLEEYEHAKARGARIYGEIRGYGLSGDAHHLTAPTENGDGAFRAMQSAVTQSGLALSDIGYINAHATSTPLGDAAENRAIKRLFGSHAYNLGVSSTKGAVGHLLGAAGAIEAIFAIKAMHESVLPPTLNLHEKTDEFDLDYVPLEAKARSVNAVLSNSFGFGGTNSSLCFAK 421          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6528.15223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC3_ECTSI1.310e-15089.603-oxoacyl-[acyl-carrier-protein] synthase n=2 Tax=... [more]
K3WGD3_GLOUD4.510e-9159.203-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=... [more]
UPI0018AEBA222.680e-9059.923-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
A0A1V9Y7T6_9STRA1.780e-8957.20Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A218Z7H0_9HELO4.580e-8957.253-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=... [more]
A0A5B2VDK0_9HYPH4.980e-8958.963-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A176W5L2_MARPO5.500e-8959.45Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A7V4SMJ9_9BACT5.900e-8960.803-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
UPI001929AA477.020e-8959.923-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
A0A067BXC2_SAPPC7.470e-8958.40Beta-ketoacyl-[acyl-carrier-protein] synthase I (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6528contigL-elsbetiae_contig6528:121..4886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.5
Seed ortholog evalue9.3e-77
Seed eggNOG ortholog115417.EPrPW00000014403
Preferred nameOXSM
KEGG rclassRC00039,RC02728,RC02729,RC02888
KEGG koko:K09458,ko:K17255
KEGG ReactionR04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119
KEGG Pathwayko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0016043,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046459,GO:0046483,GO:0051186,GO:0051790,GO:0051791,GO:0051792,GO:0055086,GO:0061024,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901576
EggNOG free text desc.3-oxoacyl- acyl-carrier-protein synthase, mitochondrial. Source PGD
EggNOG OGs1MF8W@121069,COG0304@1,KOG1394@2759
EC2.3.1.179
COG Functional cat.IQ
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Ec32 ortholog descriptionbeta-ketoacyl synthase
Ec32 orthologEc-27_002090.1
Exons8
Model size753
Cds size753
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6528.15223.1prot_L-elsbetiae_contig6528.15223.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6528 121..4886 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816720.7991178-CDS-L-elsbetiae_contig6528:120..2661622816720.7991178-CDS-L-elsbetiae_contig6528:120..266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 121..266 +
1691683764.3600318-CDS-L-elsbetiae_contig6528:120..2661691683764.3600318-CDS-L-elsbetiae_contig6528:120..266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 121..266 +
1622816720.8133366-CDS-L-elsbetiae_contig6528:844..9121622816720.8133366-CDS-L-elsbetiae_contig6528:844..912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 845..912 +
1691683764.3767178-CDS-L-elsbetiae_contig6528:844..9121691683764.3767178-CDS-L-elsbetiae_contig6528:844..912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 845..912 +
1622816720.8260925-CDS-L-elsbetiae_contig6528:1250..13241622816720.8260925-CDS-L-elsbetiae_contig6528:1250..1324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 1251..1324 +
1691683764.3849528-CDS-L-elsbetiae_contig6528:1250..13241691683764.3849528-CDS-L-elsbetiae_contig6528:1250..1324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 1251..1324 +
1622816720.8450282-CDS-L-elsbetiae_contig6528:1827..19211622816720.8450282-CDS-L-elsbetiae_contig6528:1827..1921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 1828..1921 +
1691683764.3932595-CDS-L-elsbetiae_contig6528:1827..19211691683764.3932595-CDS-L-elsbetiae_contig6528:1827..1921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 1828..1921 +
1622816720.85965-CDS-L-elsbetiae_contig6528:2655..27671622816720.85965-CDS-L-elsbetiae_contig6528:2655..2767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 2656..2767 +
1691683764.4038444-CDS-L-elsbetiae_contig6528:2655..27671691683764.4038444-CDS-L-elsbetiae_contig6528:2655..2767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 2656..2767 +
1622816720.871025-CDS-L-elsbetiae_contig6528:3355..34141622816720.871025-CDS-L-elsbetiae_contig6528:3355..3414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 3356..3414 +
1691683764.4117835-CDS-L-elsbetiae_contig6528:3355..34141691683764.4117835-CDS-L-elsbetiae_contig6528:3355..3414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 3356..3414 +
1622816720.8851395-CDS-L-elsbetiae_contig6528:3915..40311622816720.8851395-CDS-L-elsbetiae_contig6528:3915..4031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 3916..4031 +
1691683764.4199345-CDS-L-elsbetiae_contig6528:3915..40311691683764.4199345-CDS-L-elsbetiae_contig6528:3915..4031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 3916..4031 +
1622816720.898158-CDS-L-elsbetiae_contig6528:4802..48861622816720.898158-CDS-L-elsbetiae_contig6528:4802..4886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 4803..4886 +
1691683764.4277112-CDS-L-elsbetiae_contig6528:4802..48861691683764.4277112-CDS-L-elsbetiae_contig6528:4802..4886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6528 4803..4886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6528.15223.1

>prot_L-elsbetiae_contig6528.15223.1 ID=prot_L-elsbetiae_contig6528.15223.1|Name=mRNA_L-elsbetiae_contig6528.15223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp
CPFSAHAIGDAYRFIKHGDADVMVCGGSEGSVHEPALAGFARMNALSTRF
NGEPERASRPFDEDRDGFVLAAEGAAVLVLEEIDHARDRGANILAEVRGY
GATGDAHHIAAPTEDGDGPRRAMLAAIEESGLSAEAVGYVNAHATSTPLG
DAAEGRAIERVFGPRRSLLVSSTKGATGHLLGAAGSLEAAFSILAVRDGV
VPHTLNLTTPDPAFGFTMVKNAPVRGDLDAVMSNSFGFGGTNVSLLFSRA
*
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mRNA from alignment at L-elsbetiae_contig6528:121..4886+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6528.15223.1 ID=mRNA_L-elsbetiae_contig6528.15223.1|Name=mRNA_L-elsbetiae_contig6528.15223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4766bp|location=Sequence derived from alignment at L-elsbetiae_contig6528:121..4886+ (Laminarionema elsbetiae ELsaHSoW15)
TGCCCGTTCAGCGCTCACGCGATCGGGGACGCGTACCGCTTCATCAAGCA CGGCGACGCGGACGTGATGGTGTGCGGCGGCAGCGAGGGCTCCGTGCACG AGCCGGCGCTTGCCGGCTTCGCCAGGATGAACGCGCTCTCGACGAGGTAC CGTACCAACATCAGTCAGTCAAAGGATTTCTCAGCATTCCTTATGTTGCC AGAATACCAGACTCGTTTTTGTAAGTGCCGATATTTTTCCAGGTTTCGCA CTCAATTATCCCTCAGTAAAGTTTCGAAGTATTGGGCCCCCAAGTGGTGC CGATGTACCGCCGTATCGACTCCAAGCAATACACCCAGGAAGACGCCGCC GCATCTGCCAGTTTTGGTTCCGACAGAAGATTTCCCACTTCCGCTCACAT AGCTACACAGCCTAGATGTTTGGGGCGTGCTCGTTGATGATGTGGCTGTC GTTGTCGTTGTCGTTGTCGTTGCTGTTGCTGTTGTTGTTGTTGCTGTTTT TATTTTTTTCGTCGTATGCTTTTAAAATACGCCGAACTAGGCCGGCGTCG AAAACTTTTTTTAGGCAAAGTAGCTGAAACCGGTGATACTGCTTGCTGTG GTTGTGCCTTCTGCAAACGGTCATGTCGACAAAGTATTTTTTGGCGCATG TATGTGTGCGTTGATACATTTGTTTTTTGCTTCGCCGCACAAATTGGCGA ATGGTGCGGCGCGGCCGGAATCAGGTTCAACGGGGAGCCAGAGAGAGCGT CGCGGCCTTTCGACGAGGATAGAGACGGCTTCGTGTTGGCAGGTAAGGTA AGGTGCTGAACTTGTTGACGAGTCTAGTGGATAAAGAACCAGTTCTCCAC ATACACCAGGCCGCCCCCTTGGTGACCGCGGGCTAGCATTTGGACGATGG TTCACACCAAAATCAACATCAACGGCTGTAACTACCGCAACTCCACTAAC CCTAACCCTAGCATGCGGGACCTTTTGGGAACTGATGATGAGCAAAAGTT GTAGCAGCACCAGCAGCAGCAGTGGCACATTTCGGGAGTGTGCCCTTTCT TATCTCTCCCTCTCATGCGTTCTCGCACCCGGACACCTGTCCGCCACTCC TGCGCTGCGTTCTTTGCGTTCGAATCCGAGCAGAGGGCGCTGCCGTCCTG GTTTTGGAAGAAATTGACCACGCGCGAGATAGGGGGGCCAACATACTCGC AGAGGTGGGTGGATGGGGTGGATATGGGCCTGCGCGTGCGAGAGGGCGAG GCTGCATGGTTTTGAGCGAAGGGCCCCGCGCCGCGGCTAGATGTTCTCGT CCTTGTTGTCTTCTGGTGGCAGGCTGGCGAAGGCAAACACAGCCCTTCGC TCACGACCTCAAAACTCCCCCCCCCAAGAAACCAGGGAGTAGTGGTCCTG GGTTGAGGGGCTCATCGCAGCCGAACTTGGGTCGTTCATTTTTTCGTAAG GCTCTCAAGTTGCGGCTCCGGAGCTACTGTAGGCCACCCTCTCAGCCAAG GAAACACCGCAGGCGGTGGGGTCAACCACCAAGGTGTCTTGGCTTCTTCT CCAACTTCTTCCGCTTCTTCTCCCACTCCTTCGCTACTATGTATAGCTAG AGTCCACTGCTGTTGGTTCACATTTGGTCCTCTCTTTCTCTCTCCCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTTTTTTTCTGTCTGTCTG TCTCAAGGTTCGCGGATACGGTGCTACCGGTGACGCACATCACATCGCCG CACCGACCGAAGATGGAGACGGGCCGAGACGGGCCATGCTTGCCGCCATA GGTGTGTTTTCACATGTGTGTGTGTGTGTGTGTGTGTGGTTGCTTGTATG TATTATGGTTCGTGTAGACCGACCATACTGATTGATCTGTTGACCAACCA ATGTATCAGCTGGTTTGAGACAGGCTCTAGATCTACCCAGCCTACGGTGC GTGCGAGAGAGAAGGGGTGGGGGGGGGGGATACTATCGTTCCCGAGTTGT GGGCAAGGGCGCCAATTTGAGCCCTTGTGATCTCAAGGGCAATGCATTCA AACATTGATTTGTCAGAGAGACAAGAGAGGGGAGAGGAATAAGAGTTCTC TCGAATCCAAAATCGCACACATTTTGTAGCCAAGCTCATGCAACAAGGGC GTTGCGGAGAACCTTGAAGCGTTGTGGACATGGCCCTCGCTCTTGGTCCA CCACCCCATCCCCTGGATGTCCATCTCAGTCGGCATTCAATGGTGTGCAA AGAGAGGAGCAGCCGAAGATGATTTCCAACGCCATTCACGGGATCCTATT TTGGTGGTCAGCACCCTCCCTCGTTTTTGGGAAGCAGTCGAGCGTCGATG GGCCCACGGGGGGCACCGTAGTATCTAGTGCGACCGTGCGATGGCAGGTC GGTACCATACTCTCAGCCCCGTACATGATTTCACAGTACGCGTGTGTGGC AGGGGTACCTCCTGTGGGACCAACGCGAGCAATCCTCCCCCCCGCCCTTT GCTTTGTTCCGGTTCGGTGCCCGGATTCGTCTCAGAGGAGTCCGGGCTTT CCGCCGAGGCGGTCGGGTACGTAAACGCCCACGCGACGTCCACTCCGCTG GGGGATGCCGCCGAAGGGCGTGCGATTGAGCGAGTCTTCGGGCCAAGGTA AAAGCGTGTGCGCACGCGCAAGTTCAGGGGATTCGTGGAGGACTGTCTGA CACAGGACTGTTGGATCGACTTGGCGCGTTAGGTTGCTCTCTTGCCCTGT CTCCCCACAACAGCAGGGAAGGTGCGAATATGCCCCCCAAAATGGCGGTA GGGTTTCTGGCCGAGGCCTGTCTGTCGGAAGATGCACACGCCGGTATGTA GTCGGTTTGACAACCTATGTTACAGAGCAATCGAGCATTTGGGAGTCGAT CCACGGAGGTGTGGTAGTCCGTCCGTACGCACGTAAACTCCGGAGTTGAA GCCGAGTGGCGTTGTTGGGTCTATCTGCTGTGGCCGGGGGAGGGGGGAAG GTTACAGCTGCCATGACCAACAACTTTGTTTTTCAATGCAAGGGGAGGGT TAAATAGCACCTTCCAAGCTACGTGGGGTCGGTATCCGCGCCATCAGCAG TCCAGGCTTATATTTTTGGTGCAACCTCTTCGCCGGCCTTGTTTGATCTT GCGACGACATGAAAAGAGGGTTGGTAAATAGTTCAAGCGCCCTGTTCTCC CGCCCCTCTGCTCGCTATTTCTGATACATACGCAGGCGATCGTTGTTGGT GTCGTCCACCAAGGGAGCAACGGGGCATCTCCTCGGGGCTGCAGGTAAGG GCCACTTGTTGTTGGTGGTTGGTGGTGATCTTGATCTGGTGACCTTTGTT TCTGGATGTAATTGTCCTTTGCTTCGCTGCTGCTGCTGCTGCTGCTGCTG CTAGCATTGGTCCTGGTGTTGTGCATATCGTTTTCTGGTGGTGGCTGGTC TGAGCAATGAAGCTTCCGGCTAAACTCGATGTAAACATTTGCCTTGCCCC CTACTCCGCTGCCTCCCCCGCCTTCGCTACCCAATCGACACCCCCCCTCA GTTCCCTTACTTACAAGACCTTTTTTGTGTTGTGGCCCAACAGCGTTCTC TAGTCAGTGCCTCCCCACCTTGTGTATCTCACTAAATATATACTTGCAAT TTAATGCCTGACGCCCTGTGTTATCTATCTTTCTTTCTCTCTCTCTCTCT CTCCCTCTCTCTCTCTCTCGTTCTGTGTGTGTGTCTCTCTCTCTCTTCCT GCTGTAACGTTACGTACTAATGCACTAATTCCTCTGTATTTGCAGGCTCC CTGGAGGCAGCGTTTTCTATCCTGGCCGTAAGGGACGGCGTTGTGCCCCA CACCCTCAACCTTACCACACCGGACCCGGCGTTCGGTTTCACCATGGTCA AGAATGCACCGGTGAGCCAGGCGATGTCAATTGTGCGTGTACGCGTGTGC GCGTGCGGATCAAAAATAAAATAAAAGCGTCCTCGTCTACCTGTGAACGG GTGTGTGTATATGCGAAGCCCGCACTTGTTCTGTTCGATGCGTACATTTG TTGAGGTTGCAACAGATAGCCCCATCGCGAGCTGAGAGCTGAGAGCTGAG AGCAGCAGTGGCAAACAAGTGCTTTGCTCAAGAAATGTGTGTTCGCGTCT CGCCTGCACAATCCATGTTCTAGCAGTTCTAGCCTGCTCTTGAGGCGTCG GTCTTGCGCAAGGGAACTTGTGGTGGCATATTTTGACGAAAGAATAGCAG CGAATCGAGATCAGCTAGCCAAAGTCAAAGCGTCGGAGGTGGCATCACTG TCGTTTGCTGTAAATGTGATCACGGCGCCTTCGTGCTGCTTTTGTCGCCT TCATAGCTTGCCGCCCCCTCCCCTGTTCCCGCCCCGCATGCTTGGATTTA TCGGCTGGCGTTGTTGCTCCTGCCCCCCGCAAATTATTCCCCTTGATATT TATCTCAGAGACGCTGCATTCGTGTCGTTGGCTGATCGTAAAGCGTTTCT CGCCTTGCGCACAAAGTATTTCACGTTGTGACCCTCCCCTCGTCCCGGTG CTGTTTTGTCTCCGCGCGTTGTCTTTTCGGCGCGTTCCTTCGTGTGTTAC CCCGCACACGTTTTGTTTGTTGGTTGTGGGTTTTGATGGGCGACGTCGAC GAAAACGGCTACGACGGATGCGACCGCAAAAGGTAAGGGGCGACTTGGAC GCCGTGATGAGCAACTCTTTCGGCTTCGGTGGCACCAATGTCTCGTTGCT CTTCTCCCGCGCGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6528:121..4886+

>mRNA_L-elsbetiae_contig6528.15223.1 ID=mRNA_L-elsbetiae_contig6528.15223.1|Name=mRNA_L-elsbetiae_contig6528.15223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1506bp|location=Sequence derived from alignment at L-elsbetiae_contig6528:121..4886+ (Laminarionema elsbetiae ELsaHSoW15)
TGCCCGTTCAGCGCTCACGCGATCGGGGACGCGTACCGCTTCATCAAGCA
CGGCGACGCGGACGTGATGGTGTGCGGCGGCAGCGAGGGCTCCGTGCACG
AGCCGGCGCTTGCCGGCTTCGCCAGGATGAACGCGCTCTCGACGAGTGCC
CGTTCAGCGCTCACGCGATCGGGGACGCGTACCGCTTCATCAAGCACGGC
GACGCGGACGTGATGGTGTGCGGCGGCAGCGAGGGCTCCGTGCACGAGCC
GGCGCTTGCCGGCTTCGCCAGGATGAACGCGCTCTCGACGAGGTTCAACG
GGGAGCCAGAGAGAGCGTCGCGGCCTTTCGACGAGGATAGAGACGGCTTC
GTGTTGGCAGGTTCAACGGGGAGCCAGAGAGAGCGTCGCGGCCTTTCGAC
GAGGATAGAGACGGCTTCGTGTTGGCAGCAGAGGGCGCTGCCGTCCTGGT
TTTGGAAGAAATTGACCACGCGCGAGATAGGGGGGCCAACATACTCGCAG
AGCAGAGGGCGCTGCCGTCCTGGTTTTGGAAGAAATTGACCACGCGCGAG
ATAGGGGGGCCAACATACTCGCAGAGGTTCGCGGATACGGTGCTACCGGT
GACGCACATCACATCGCCGCACCGACCGAAGATGGAGACGGGCCGAGACG
GGCCATGCTTGCCGCCATAGGTTCGCGGATACGGTGCTACCGGTGACGCA
CATCACATCGCCGCACCGACCGAAGATGGAGACGGGCCGAGACGGGCCAT
GCTTGCCGCCATAGAGGAGTCCGGGCTTTCCGCCGAGGCGGTCGGGTACG
TAAACGCCCACGCGACGTCCACTCCGCTGGGGGATGCCGCCGAAGGGCGT
GCGATTGAGCGAGTCTTCGGGCCAAGAGGAGTCCGGGCTTTCCGCCGAGG
CGGTCGGGTACGTAAACGCCCACGCGACGTCCACTCCGCTGGGGGATGCC
GCCGAAGGGCGTGCGATTGAGCGAGTCTTCGGGCCAAGGCGATCGTTGTT
GGTGTCGTCCACCAAGGGAGCAACGGGGCATCTCCTCGGGGCTGCAGGCG
ATCGTTGTTGGTGTCGTCCACCAAGGGAGCAACGGGGCATCTCCTCGGGG
CTGCAGGCTCCCTGGAGGCAGCGTTTTCTATCCTGGCCGTAAGGGACGGC
GTTGTGCCCCACACCCTCAACCTTACCACACCGGACCCGGCGTTCGGTTT
CACCATGGTCAAGAATGCACCGGCTCCCTGGAGGCAGCGTTTTCTATCCT
GGCCGTAAGGGACGGCGTTGTGCCCCACACCCTCAACCTTACCACACCGG
ACCCGGCGTTCGGTTTCACCATGGTCAAGAATGCACCGGTAAGGGGCGAC
TTGGACGCCGTGATGAGCAACTCTTTCGGCTTCGGTGGCACCAATGTCTC
GTTGCTCTTCTCCCGCGCGTGAGTAAGGGGCGACTTGGACGCCGTGATGA
GCAACTCTTTCGGCTTCGGTGGCACCAATGTCTCGTTGCTCTTCTCCCGC
GCGTGA
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