mRNA_L-elsbetiae_contig6526.15221.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6526.15221.1
Unique NamemRNA_L-elsbetiae_contig6526.15221.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.630e-49
Identity = 131/303 (43.23%), Postives = 142/303 (46.86%), Query Frame = 1
Query:    7 DGGD-ACCAGGVAALGRVCSPTVGAPCSMVSDSAXXXXXXXXXXXXXXXXXXXXXXAETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            DGG  ACC GGV A GR CS T  APC  V                             C G I GI + D  VCC  SCGSC GTGC    GG G+CC     G+ A    C +TG APC+ G   T                 C  G+ GI   D CC  SCG+CGG GCS RDGG      ACC GGV A GR CS T  APCM   +     XXXXXXXX                +C G I GI + D  VCC  SCGSCGGTGC    GG G+CC  G R   A    CSVTG APC
Sbjct:   76 DGGSGACCGGGVRASGRYCSVTGEAPCMTVP---------------------------MCDGGIVGIQASD--VCCSASCGSCAGTGCSGRDGGSGACC---GGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGS----GACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVP-----------MCDGGIVGIQTSD--VCCSTSCGSCGGTGCSGRDGGSGACCGGGVR---ASGRYCSVTGEAPC 326          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 6.150e-49
Identity = 140/303 (46.20%), Postives = 152/303 (50.17%), Query Frame = 1
Query:    7 DGG-DACCAGGVAALGRVCSPTVGAPCSMVSDSAXXXXXXXXXXXXXXXXXXXXXXAETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            DGG ++CC GGV A GR CS T  APC                 XXXXXXXXX      C GDI GI S D  VCC  SCGSCGG+GC    GG  SCC  G R   A    C +TG APC+ G   T                 C   + GI   D CC  SCGTCGG GC+GRDGG     ++CC GGV A GR CS T  APCM   +   A XXXXXXXX                 C G I GI + D  VCC  SCGSCGG+GC    GG  SCC  G R   A    CSVTG APC
Sbjct:   94 DGGSESCCGGGVRASGRYCSITGEAPCMT--------GPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSD--VCCSASCGSCGGSGCTERDGGSESCCGGGVR---ASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGTCGGSGCTGRDGGS----ESCCGGGVRASGRYCSITGEAPCMTGAAPTPAXXXXXXXXXTVEVPK-----------CDGGIVGIQASD--VCCSLSCGSCGGSGCTGRDGGSESCCGGGVR---ASGRDCSVTGEAPC 363          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.860e-48
Identity = 134/310 (43.23%), Postives = 152/310 (49.03%), Query Frame = 1
Query:    7 DGG-DACCAGGVAALGRVCSPTVGAPC-------SMVSDSAXXXXXXXXXXXXXXXXXXXXXXAETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            DGG DACC GGV A GR+CS T  APC          S              XXXXXX        C G I GI + +  VCC  SCGSCGG GC    GG  +CC     G+ A    C +TG APCI G   T                 C  G+ GI   + CC  SCG+CGG+GCSGRDGG     DACC GGV A GR+C+ T  APC+   +     XXXXXXXX                +C G I GI + D  VCC  SCGSC G+GC    GGP +CC  G R   A    CSVTG APC
Sbjct:  169 DGGSDACCGGGVTASGRLCSVTGEAPCITGPAPTPAPSPPXTVEGPAPTLEPXXXXXXPPAGEVPMCDGGIVGIQAKE--VCCSASCGSCGGVGCSGRDGGSDACC---GGGVTASGRLCAVTGEAPCITGPAPTPEXXXXXXXXXTVEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGS----DACCGGGVTASGRLCAVTGEAPCITGPAPTPEXXXXXXXXXTVEAP-----------MCDGGIIGIQTSD--VCCSASCGSCXGSGCSGRDGGPDACCGGGVR---ASGRFCSVTGEAPC 453          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.530e-47
Identity = 144/303 (47.52%), Postives = 159/303 (52.48%), Query Frame = 1
Query:    7 DGG-DACCAGGVAALGRVCSPTVGAPCSMVSDSAXXXXXXXXXXXXXXXXXXXXXXAETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            DGG ++CC GGV A GR CS T  APC M S +  XXXXXXXXXXXXX           C G I GI + D  VCC  SCGSCGG+GC    GG  SCC  G R   A    C +TG APC+ G   T                 C  G+ GI   D CC  SCG+CGG GC+GRDGG     ++CC GGV A GR CS T  APCM   +     XXXXXXXX                +C G I GI S D  VCC  SCGSCGG+GC    GG  SCC  G RG       CSVTG APC
Sbjct:  107 DGGSESCCGGGVRASGRYCSVTGEAPC-MTSPAPTXXXXXXXXXXXXXEIPM-------CDGGIVGIQTSD--VCCSASCGSCGGSGCTGRDGGSESCCGGGVR---ASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGS----ESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVP-----------MCDGGIVGIQSSD--VCCSASCGSCGGSGCSGRDGGSESCCGGGVRGS---GRYCSVTGEAPC 376          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 6.050e-46
Identity = 103/246 (41.87%), Postives = 115/246 (46.75%), Query Frame = 1
Query:  175 ETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            ETC G I GI   D  + C  SCGSCGGTGC    GG  +CC  G R   A    C +TG APC+ G   T                 C  G+ GI   D CC  SCG+CGG GC+ RDGG     +ACC GGV A GR CS T  APCM ++                              +C G I GI   D  VCC  SCGSCGGTGC    GG  +CC  G R   A    CSVTG APC
Sbjct:   62 ETCDGGIVGIQQSD--ISCSSSCGSCGGTGCTSRDGGSEACCGGGVR---ASGRYCSVTGEAPCMTGPAPTPEXXXXXXXXXTDEVSMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGS----EACCGGGVRASGRYCSVTGEAPCMTNE----------------------------VPMCDGGIVGIQQSD--VCCSLSCGSCGGTGCTSRDGGSEACCGGGVR---ASGRDCSVTGEAPC 265          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.210e-45
Identity = 117/247 (47.37%), Postives = 126/247 (51.01%), Query Frame = 1
Query:  178 TCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-------------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            TC G I GI S D  VCC  SCGSCGGTGC    GG  +CC  G R   +    C +TG APCI G   T                   C  G+ GI   D CC  SCG+CGG GC+GRDGG    EDACC GGV A GR CS T  APCM   +     XXXXXXXX                +C G I GI S D  VCC  SCGSCGGTGC    GG  +CC  G R   A    CSVTG APC
Sbjct:   52 TCDGGIVGIQSSD--VCCSLSCGSCGGTGCTGRDGGADACCGGGVR---SSGRFCSVTGEAPCITGPAPTPEPTXXXXXXXXDEGAVPMCDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGG----EDACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTEEVP-----------MCDGGIVGIQSSD--VCCSLSCGSCGGTGCTVRDGGADACCGGGVR---ASGRDCSVTGEAPC 273          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 8.570e-43
Identity = 101/244 (41.39%), Postives = 113/244 (46.31%), Query Frame = 1
Query:  181 CPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            C G I GI   D  +CC  SCGSCGGTGC    GG  +CC  G R   A    C +TG APC+ G   T                 C  G+ GI   D CC   CG+CGG GC+ RDGG     +ACC GGV A GR CS T  APCM ++                              +C G I GI   D  VCC  SCGSCGGTGC    GG  +CC  G R   A    CSVTG APC
Sbjct:   25 CDGGIVGIQQSD--ICCSSSCGSCGGTGCTSRDGGSEACCGGGVR---ASGRFCSVTGEAPCMTGPAPTPXXXXXXXXXXTDEVPMCDGGIVGIQQSDICCSSRCGSCGGTGCTSRDGGS----EACCGGGVRASGRYCSVTGEAPCMTNE----------------------------VPMCDGGIVGIQQSD--VCCSLSCGSCGGTGCTSRDGGSEACCGGGVR---ASGRDCSVTGEAPC 226          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 8.120e-40
Identity = 108/246 (43.90%), Postives = 121/246 (49.19%), Query Frame = 1
Query:  181 CPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRT-----------------CTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKR--GILAVQESCSVTGSAPC 861
            C G IAGI + D  VCC  SCGSCGG+GC    GG  +CC  G R   A    C +T  APC+ G   T                 C   + GI   D CC  SCG+CGG GCSGRDGG     DACC GGV A GR CS T  APCM   +  +   XXXXXXX                +C G I GI + D  VCC  SCGS     C    GGP +CC  G R  G+L     CSVTG APC
Sbjct:  180 CEGGIAGIQASD--VCCSVSCGSCGGSGCSGRDGGSDACCGGGVR---ASGRFCSITEEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGGS----DACCGGGVRASGRFCSVTGEAPCMTGPAPTTEPTXXXXXXXTVEVP-----------MCDGGIVGIQASD--VCCSASCGSXXXXXCTGRDGGPDACCGGGVRASGLL-----CSVTGEAPC 398          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: H6WBB4_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB4_VAULI)

HSP 1 Score: 96.3 bits (238), Expect = 4.310e-19
Identity = 85/230 (36.96%), Postives = 109/230 (47.39%), Query Frame = 1
Query:  202 IMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCDLTGSAPCIIGQGRTCTAGVP-------GILDDDA---CCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSADXXXXXXXXXXXXXXXXXXXXXVFEICPGDIPGIMSGDGRVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC 861
            I    G  CC  +CG+CGG GC   PGG   CC         + +SC ++ + PCI    +      P       G + D +   CCP+ CGTCGG+GC  R GG       CC G V    + C  +   PC      ++       XXXXXXXXXXXXXX     +CP    GI+   G VCC  +CG+CGG GC   PGG  +CC         V +SC+ T + PC
Sbjct:  178 IPDSSGMKCCPATCGACGGFGCDKRPGGAMMCCTGN------ITKSCSMS-APPCIASDDKPYPPMPPSSGKCPDGSIPDASGMKCCPMKCGTCGGLGCDMRPGGAAS----CCTGSVT---KTCDKSP-PPC------IAMGKPDEKXXXXXXXXXXXXXXMPPHGMCPKG--GIIDASGSVCCPATCGACGGAGCDKRPGGDINCCTS------KVTQSCA-TKTFPC 377          
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Match: A0A7R9YY20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY20_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.940e-18
Identity = 53/133 (39.85%), Postives = 67/133 (50.38%), Query Frame = 1
Query:  181 CPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCCIEGKRGILAVQES-CDLTGSAPCIIGQGRTCTAGVPGILDDDACCPLSCGTCGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMV 576
            C   I G+ S   +VCC  SCG CGG+GC+ FPGG  +CC     G +A  +  C       CI+   + C  GV   +  D CC  SCGTCGG GC  R GG      +CC  GV + G VCS      C++
Sbjct:  253 CYNGIEGVSSSGVEVCCASSCGQCGGSGCWQFPGGSANCCT----GAIASSDIVCSEFTDVGCIMPATQWCEYGV---ISGDICCAGSCGTCGGTGCGSRPGGW----SSCCGSGVTSSGNVCSDYSDIACII 374          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6526.15221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3U7_ECTSI1.630e-4943.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTV1_9PHAE6.150e-4946.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWJ0_9PHAE1.860e-4843.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E0_ECTSI1.530e-4747.52N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7G5D5_ECTSI6.050e-4641.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVC9_9PHAE1.210e-4547.37AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G3T6_ECTSI8.570e-4341.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Y1_9PHAE8.120e-4043.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H6WBB4_VAULI4.310e-1936.96Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A7R9YY20_9STRA1.940e-1839.85Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6526contigL-elsbetiae_contig6526:6367..8687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score136.7
Seed ortholog evalue1.7e-29
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categoryother localisation
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Exons5
Model size865
Cds size861
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6526.15221.1prot_L-elsbetiae_contig6526.15221.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6526 6369..8687 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816720.6554713-CDS-L-elsbetiae_contig6526:6368..65651622816720.6554713-CDS-L-elsbetiae_contig6526:6368..6565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 6369..6565 -
1691683764.2679286-CDS-L-elsbetiae_contig6526:6368..65651691683764.2679286-CDS-L-elsbetiae_contig6526:6368..6565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 6369..6565 -
1622816720.6703837-CDS-L-elsbetiae_contig6526:7123..73301622816720.6703837-CDS-L-elsbetiae_contig6526:7123..7330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7124..7330 -
1691683764.2832105-CDS-L-elsbetiae_contig6526:7123..73301691683764.2832105-CDS-L-elsbetiae_contig6526:7123..7330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7124..7330 -
1622816720.680779-CDS-L-elsbetiae_contig6526:7501..75791622816720.680779-CDS-L-elsbetiae_contig6526:7501..7579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7502..7579 -
1691683764.292077-CDS-L-elsbetiae_contig6526:7501..75791691683764.292077-CDS-L-elsbetiae_contig6526:7501..7579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7502..7579 -
1622816720.6945643-CDS-L-elsbetiae_contig6526:7829..80361622816720.6945643-CDS-L-elsbetiae_contig6526:7829..8036Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7830..8036 -
1691683764.300729-CDS-L-elsbetiae_contig6526:7829..80361691683764.300729-CDS-L-elsbetiae_contig6526:7829..8036Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 7830..8036 -
1622816720.7049475-CDS-L-elsbetiae_contig6526:8515..86871622816720.7049475-CDS-L-elsbetiae_contig6526:8515..8687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 8516..8687 -
1691683764.3094187-CDS-L-elsbetiae_contig6526:8515..86871691683764.3094187-CDS-L-elsbetiae_contig6526:8515..8687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6526 8516..8687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6526.15221.1

>prot_L-elsbetiae_contig6526.15221.1 ID=prot_L-elsbetiae_contig6526.15221.1|Name=mRNA_L-elsbetiae_contig6526.15221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp
KFDGGDACCAGGVAALGRVCSPTVGAPCSMVSDSADSSDSSDSSDSSGSS
DSKDSTDAETCPGDIAGIMSGDGKVCCDRSCGSCGGTGCFHFPGGPGSCC
IEGKRGILAVQESCDLTGSAPCIIGQGRTCTAGVPGILDDDACCPLSCGT
CGGIGCSGRDGGKFDGEDACCAGGVAALGRVCSSTVGAPCMVSDSAVSAD
SSESTQPSDSSDSSESSDLTDVFEICPGDIPGIMSGDGRVCCDRSCGSCG
GTGCFHFPGGPGSCCIEGKRGILAVQESCSVTGSAPC
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mRNA from alignment at L-elsbetiae_contig6526:6367..8687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6526.15221.1 ID=mRNA_L-elsbetiae_contig6526.15221.1|Name=mRNA_L-elsbetiae_contig6526.15221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2321bp|location=Sequence derived from alignment at L-elsbetiae_contig6526:6367..8687- (Laminarionema elsbetiae ELsaHSoW15)
AAATTTGATGGAGGAGACGCCTGCTGCGCTGGTGGCGTCGCAGCGTTGGG CCGCGTTTGCTCTCCCACCGTTGGAGCACCGTGCAGCATGGTTTCGGACT CGGCTGACTCCAGTGACTCCAGTGACTCCAGTGACTCGAGCGGCTCGAGC GACTCGAAGGACTCGACGGACGGTATGTTTCGGATATCGGGTGGTTCGAG CAGGGTCGACGGACAAGTCAGACGACCACATACATACCTGCCGCCCAGCC GCACGGGGAATTTTGTCGTGTCAAACTTGTGAATGAATGCAACGCAAAAT GTGCTCGTCGTAGGTCCCACTTCGGGATGCAGATGAACACGCTTGTGGCA ACTAAGTTAGGTGATCCCAAGAAGAAGGGGAACCCTTTTTGTAACAGTAT CGTGACCGCTGGGTACTGGGCGTTCGTGGCCATGAGGACCACCTTTTTCT AGAACTCAGTTGCATTCGGTTTGGACGGTGCAACAGAGAGGGGCACTGAA AGACCCATCGTGAGGGGCGCCATGGACCCTAAGACCCGAAATATGTGCGC GTTGTTGCTTGCAGTTGCACGAGGAAGTATTTAGATGCCTCTGAATGTCC AGAGCAGGTGGGACTATAACCTTGTTTTTATTGACATGTTTTCGTCTACA GCCGAGACGTGTCCTGGCGACATTGCCGGCATTATGTCCGGAGATGGCAA AGTATGCTGCGATCGTTCGTGCGGAAGCTGCGGAGGCACCGGCTGCTTCC ACTTCCCTGGGGGGCCGGGTAGCTGCTGCATCGAGGGAAAGCGAGGCATT CTCGCTGTCCAAGAGAGTTGTGACTTGACCGGGTCTGCCCCTTGCATCAT CGGTCAGGGTACGTTGTAATTCCAGGCAATGCAGTATGAGTCGACGCCGA ACGCTGAGCCACCGATGTGGGGCCCATGGACATGATAACACTTTTTTCTA GAATATTTGGACGGGCACTCGCAGAGTACATGAGCTCCTCGAGCAAAGCC GAGTGATCTAGGTTACCTGTATAGCATCTCACCCTTTCTACTGGGGATTA TCATAAACTCACACCTCACACTCTTCGCGGCCCTGCCTCCTGTTATCGAC GCCGCCAGGCCGAACGTGCACCGCGGGCGTTCCCGGGATTCTGGACGACG ATGCCTGCTGCCCGCTCAGCTGCGGAACTTGCGGAGGTACGTACTTACTT GTGGACCTGACAACTCAATGCACTGCAATCAACGCGCATACAACTGCATG TTTGGCGTAGCGTTGTTCAACTGTTGCAGTATCGACACCAATCTGGTGTG GTAATATGTCAACACACATCCAGCTTTCTCTGTGTCTCTCAAACATGTCC CCCCCAGGAATCGGTTGCAGTGGGAGGGACGGTGGTAAATTTGATGGCGA AGACGCCTGCTGTGCTGGTGGCGTCGCAGCGTTGGGCCGCGTTTGCTCTT CCACCGTTGGAGCCCCGTGCATGGTTTCGGACTCGGCTGTCTCGGCTGAC TCGAGCGAATCCACTCAACCCAGTGACTCGAGCGACTCGAGCGAGTCCAG CGACTTGACGGACGGTATGTCTTGGATATCGGGTGGTTGGAGCAGGGTCG ACGGGCAAGTCAGACGCAGACGACCATATACATACCTGCCGCACGGGGGA CTTACTATCCCTGTGAATGAGTAGAACGCAAGTGTTGCTCATCGTAGGTC CCGCTTCGAGATGCGTTTGAACGGGTTTGTGGCCATGGTCCCAAGAAGGG GAACCCTTGTTGTAGAAAGTGACCGTAACCGCCGGATAGCGTGACCAGTT CCGGATAAGAAGTTTAGTTCAGATTTAAGCGTAGTTCACGCGTTCGTGAC CATGAGGACCACCTTGAACACGTGAACGGGAGAGAGGCCAAGCAATCTAG GTTAACTCAAGTTATATTCGGTTCGGACGGTGCAGCGGAGAGGGGCACTG AGAGACCCCTCGTAAGGGAGCCACGGACTCTTTTAGGGGAGTCACGGACC CTAAAACACCCAGAATAGGTGTGTTTCTGCCTGCATTCGCACGGGGAAGT ACATAAATGCCTCTGGGTCTCCAGCGCAGTTGGAACTAATCTTCGATTAA CTTGACATGTGTTCCTCTACAGTCTTCGAGATTTGTCCTGGCGACATTCC CGGCATCATGTCCGGCGATGGCAGAGTATGCTGCGATCGTTCGTGCGGAA GCTGCGGAGGCACCGGCTGCTTCCACTTCCCTGGGGGGCCGGGTAGCTGC TGCATCGAGGGAAAACGAGGCATTCTCGCTGTCCAAGAGAGTTGTTCCGT GACCGGGTCTGCCCCTTGCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6526:6367..8687-

>mRNA_L-elsbetiae_contig6526.15221.1 ID=mRNA_L-elsbetiae_contig6526.15221.1|Name=mRNA_L-elsbetiae_contig6526.15221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1722bp|location=Sequence derived from alignment at L-elsbetiae_contig6526:6367..8687- (Laminarionema elsbetiae ELsaHSoW15)
AAATTTGATGGAGGAGACGCCTGCTGCGCTGGTGGCGTCGCAGCGTTGGG
CCGCGTTTGCTCTCCCACCGTTGGAGCACCGTGCAGCATGGTTTCGGACT
CGGCTGACTCCAGTGACTCCAGTGACTCCAGTGACTCGAGCGGCTCGAGC
GACTCGAAGGACTCGACGGACGAAATTTGATGGAGGAGACGCCTGCTGCG
CTGGTGGCGTCGCAGCGTTGGGCCGCGTTTGCTCTCCCACCGTTGGAGCA
CCGTGCAGCATGGTTTCGGACTCGGCTGACTCCAGTGACTCCAGTGACTC
CAGTGACTCGAGCGGCTCGAGCGACTCGAAGGACTCGACGGACGCCGAGA
CGTGTCCTGGCGACATTGCCGGCATTATGTCCGGAGATGGCAAAGTATGC
TGCGATCGTTCGTGCGGAAGCTGCGGAGGCACCGGCTGCTTCCACTTCCC
TGGGGGGCCGGGTAGCTGCTGCATCGAGGGAAAGCGAGGCATTCTCGCTG
TCCAAGAGAGTTGTGACTTGACCGGGTCTGCCCCTTGCATCATCGGTCAG
GCCGAGACGTGTCCTGGCGACATTGCCGGCATTATGTCCGGAGATGGCAA
AGTATGCTGCGATCGTTCGTGCGGAAGCTGCGGAGGCACCGGCTGCTTCC
ACTTCCCTGGGGGGCCGGGTAGCTGCTGCATCGAGGGAAAGCGAGGCATT
CTCGCTGTCCAAGAGAGTTGTGACTTGACCGGGTCTGCCCCTTGCATCAT
CGGTCAGGGCCGAACGTGCACCGCGGGCGTTCCCGGGATTCTGGACGACG
ATGCCTGCTGCCCGCTCAGCTGCGGAACTTGCGGAGGCCGAACGTGCACC
GCGGGCGTTCCCGGGATTCTGGACGACGATGCCTGCTGCCCGCTCAGCTG
CGGAACTTGCGGAGGAATCGGTTGCAGTGGGAGGGACGGTGGTAAATTTG
ATGGCGAAGACGCCTGCTGTGCTGGTGGCGTCGCAGCGTTGGGCCGCGTT
TGCTCTTCCACCGTTGGAGCCCCGTGCATGGTTTCGGACTCGGCTGTCTC
GGCTGACTCGAGCGAATCCACTCAACCCAGTGACTCGAGCGACTCGAGCG
AGTCCAGCGACTTGACGGACGGAATCGGTTGCAGTGGGAGGGACGGTGGT
AAATTTGATGGCGAAGACGCCTGCTGTGCTGGTGGCGTCGCAGCGTTGGG
CCGCGTTTGCTCTTCCACCGTTGGAGCCCCGTGCATGGTTTCGGACTCGG
CTGTCTCGGCTGACTCGAGCGAATCCACTCAACCCAGTGACTCGAGCGAC
TCGAGCGAGTCCAGCGACTTGACGGACGTCTTCGAGATTTGTCCTGGCGA
CATTCCCGGCATCATGTCCGGCGATGGCAGAGTATGCTGCGATCGTTCGT
GCGGAAGCTGCGGAGGCACCGGCTGCTTCCACTTCCCTGGGGGGCCGGGT
AGCTGCTGCATCGAGGGAAAACGAGGCATTCTCGCTGTCCAAGAGAGTTG
TTCCGTGACCGGGTCTGCCCCTTGCTCTTCGAGATTTGTCCTGGCGACAT
TCCCGGCATCATGTCCGGCGATGGCAGAGTATGCTGCGATCGTTCGTGCG
GAAGCTGCGGAGGCACCGGCTGCTTCCACTTCCCTGGGGGGCCGGGTAGC
TGCTGCATCGAGGGAAAACGAGGCATTCTCGCTGTCCAAGAGAGTTGTTC
CGTGACCGGGTCTGCCCCTTGC
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