prot_L-elsbetiae_contig652.15212.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig652.15212.1
Unique Nameprot_L-elsbetiae_contig652.15212.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length503
Homology
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: A0A6H5KP90_9PHAE (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP90_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 2.440e-100
Identity = 282/506 (55.73%), Postives = 317/506 (62.65%), Query Frame = 0
Query:    2 KATESTVGIACFMTESDTGFSGVLKQRFSDFIVHEVAPGGEVCKGTDFPGLLRPIEHVRQPAPPDQPHPPAAAKPDSEXXXXXXXXXXXTTTAAEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRLIKGGAEALSKVAGKEVAAKVEAFVLEGVTIRGKDKRRLTLPTSDKLSRTKVYVVLKDFLSKYVLAETVDEPASISTQSPAATTEDATAEGKEKVGAEAKAADSGSAGAEGAATATAVAGEKKDGSSPEADEA--GNGDTAADETKTASPLKKKRKVDGENGGGAPADEKTXXXXXXXXXXXXXXXXXAAAVKKPDPNGPKCVQLKMKPDWRKA-GGGKRRRGDLDKRDRGGRGGS---RWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAFQ 501
            +A ESTVGI  F+TE+DTGFSGVLKQR+SDFIVHEV   GEVCKGTDFPGLLRPIEH RQP PP    P AAA                +T +  A                           XXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXX ++  K GAEAL  V G++VAAKVEAF+LEG+ + GKDKR LTLPT+DK +R KVY +LK  LSKY+LA TVD+PAS     P   ++  T E K+    +AK              ATA A + K G+  EA  A  GNG        T +P  +K    GENG                          AAA KKPDPNGPKCVQLKMKPDWR   GG KRRRGDLD+            RW WPEGRPE+CRFVLYKENSDTMGAVSRI KH RF  K+VGYAGTKDKR VTAQWCT+K+++IEELR++NRPLGAFQ
Sbjct:    4 RAKESTVGITHFITENDTGFSGVLKQRYSDFIVHEVTRDGEVCKGTDFPGLLRPIEHERQPPPPAHGQPTAAAA--------HKETPSDSTASPTAARGSDAVEDGSKDKDGEGKGDGEGSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDGSSGGGMXXXXXXXXXXXXXXXXXXXXXXXXXLKKQAKSGAEALLPVVGEQVAAKVEAFMLEGLGVTGKDKRTLTLPTADKNTRAKVYGLLKQNLSKYLLAVTVDDPASAP---PPMASKTETFEAKDAEDGDAK--------------ATAGASDDKSGAGGEAPAAKEGNG--------TENPSSEKG---GENGXXXXXXXXXEPAEKTAANTKASAGTPAAA-KKPDPNGPKCVQLKMKPDWRNIDGGNKRRRGDLDRSGXXXXXXXXXRRWVWPEGRPEFCRFVLYKENSDTMGAVSRICKHLRFSSKVVGYAGTKDKRGVTAQWCTVKRKSIEELRSFNRPLGAFQ 472          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: A0A7S1FXE3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXE3_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.770e-12
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0
Query:  406 KRRRGDLDKRDRGGRGGSRWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVG----YAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLG 498
            KRRRG+ +             WP+ R EY +F+LYKEN DT    + +S+H     K  G    YAG KDKR VTAQ+CT+KK+T EE+  +N  +G
Sbjct:  343 KRRRGETE------------VWPQDRSEYLQFILYKENVDTAAGCADLSRHLHLDRKREGCQIEYAGMKDKRGVTAQYCTVKKKTEEEVSQWNDFVG 427          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: A0A5B8MJU2_9CHLO (tRNA pseudouridine synthase D n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJU2_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 5.930e-12
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  432 PEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLG 498
            P++CRF+LYKEN+DT  A+  ++KH R   K + YAGTKDKR VT QWC   K +  +L  YNR  G
Sbjct:  195 PKFCRFLLYKENTDTQYAIHMLAKHLRINPKRLSYAGTKDKRGVTVQWCMGFKISARDLEYYNRRKG 261          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: A0A8K0EQN5_BRALA (PUS7 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EQN5_BRALA)

HSP 1 Score: 79.0 bits (193), Expect = 7.360e-12
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0
Query:  424 RWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAFQV 502
            ++ WP+GRP+YC FVLYKEN DTM A++ ++ + R       YAGTKDKRA+T Q  T  +   E L   N+    + V
Sbjct:  185 KFKWPKGRPDYCHFVLYKENMDTMDAINMLAMNLRLKPGFFAYAGTKDKRAITVQEVTAYRIAAERLSNLNKQQTRYVV 263          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: UPI0003338FE3 (pseudouridylate synthase 7 homolog isoform X3 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI0003338FE3)

HSP 1 Score: 78.6 bits (192), Expect = 1.050e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  426 AWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAFQV 502
            +WP+ R  YC FVLYKEN DTM A++ +SK+ R    I  Y GTKDKRA+T Q   + K T + L   N+ L  F++
Sbjct:  249 SWPKSRGNYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKL 325          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: UPI00122EFCAC (pseudouridylate synthase 7 homolog isoform X1 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI00122EFCAC)

HSP 1 Score: 78.6 bits (192), Expect = 1.060e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  426 AWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAFQV 502
            +WP+ R  YC FVLYKEN DTM A++ +SK+ R    I  Y GTKDKRA+T Q   + K T + L   N+ L  F++
Sbjct:  255 SWPKSRGNYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKL 331          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: V4B0C9_LOTGI (TRUD domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B0C9_LOTGI)

HSP 1 Score: 78.2 bits (191), Expect = 1.270e-11
Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  423 SRWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPL-----GAFQ 501
            SRWA    RP+YC+FVLYKEN DTM  +S ISK+ R    +  YAGTKDKRA T Q  T+ K   E +++ N  L     G FQ
Sbjct:  188 SRWA--ASRPKYCKFVLYKENKDTMDTISLISKNMRLNANLFSYAGTKDKRAKTTQEITVFKVEAERIKSLNDILRNMGFGNFQ 269          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: K3WA29_GLOUD (TRUD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA29_GLOUD)

HSP 1 Score: 78.2 bits (191), Expect = 1.560e-11
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 0
Query:  404 GGKRRRGDLDKRDRGGRGGSRWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNR 495
            GGK+R+ D+D+RD      SR  WP  RP+Y +FVLYK N +T   +S+++K          YAGTKDKR +T Q CTI + ++E L   NR
Sbjct:  296 GGKKRK-DMDQRD------SRNKWPTDRPDYLQFVLYKRNMETNSVMSQLAKAMSVNVSAFSYAGTKDKRGITTQLCTIYRGSVERLEMLNR 380          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: UPI001CF31609 (pseudouridylate synthase 7 homolog n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF31609)

HSP 1 Score: 77.4 bits (189), Expect = 2.550e-11
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  427 WPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPL 497
            WP+    YC FVLYKEN DTM A+S +SK  +    + GYAGTKD+RAVT QW +  +   E+L++ N  L
Sbjct:  263 WPQELDNYCWFVLYKENKDTMDAISLLSKLLKIKTGVFGYAGTKDRRAVTTQWISAYRVRAEQLQSLNSSL 333          
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Match: UPI001601F34D (pseudouridylate synthase 7 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601F34D)

HSP 1 Score: 77.0 bits (188), Expect = 3.170e-11
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0
Query:  423 SRWAWPEGRPEYCRFVLYKENSDTMGAVSRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAF 500
            +++ WP+GRP+YC FVLYKEN DTM A++ ++ + R       YAGTKDKRA+T Q  T  +   E L   N+    +
Sbjct:  185 NKFKWPKGRPDYCHFVLYKENLDTMDAINMLAMNLRVRPGFFAYAGTKDKRAITVQEVTAYRIAAERLCDLNKHTSRY 262          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig652.15212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP90_9PHAE2.440e-10055.73TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S1FXE3_9STRA3.770e-1243.30Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A5B8MJU2_9CHLO5.930e-1252.24tRNA pseudouridine synthase D n=2 Tax=Chloropicon ... [more]
A0A8K0EQN5_BRALA7.360e-1244.30PUS7 protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]
UPI0003338FE31.050e-1146.75pseudouridylate synthase 7 homolog isoform X3 n=1 ... [more]
UPI00122EFCAC1.060e-1146.75pseudouridylate synthase 7 homolog isoform X1 n=1 ... [more]
V4B0C9_LOTGI1.270e-1150.00TRUD domain-containing protein n=1 Tax=Lottia giga... [more]
K3WA29_GLOUD1.560e-1144.57TRUD domain-containing protein n=1 Tax=Globisporan... [more]
UPI001CF316092.550e-1149.30pseudouridylate synthase 7 homolog n=1 Tax=Acropor... [more]
UPI001601F34D3.170e-1143.59pseudouridylate synthase 7 homolog n=1 Tax=Branchi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..186
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 423..500
e-value: 1.5E-17
score: 65.1
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 433..491
e-value: 1.5E-11
score: 43.8
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 3..497
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 7..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig652contigL-elsbetiae_contig652:31546..34954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig652.15212.1mRNA_L-elsbetiae_contig652.15212.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig652 31546..34954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig652.15212.1 ID=prot_L-elsbetiae_contig652.15212.1|Name=mRNA_L-elsbetiae_contig652.15212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=503bp
TKATESTVGIACFMTESDTGFSGVLKQRFSDFIVHEVAPGGEVCKGTDFP
GLLRPIEHVRQPAPPDQPHPPAAAKPDSEPAPAAAAAAAATTTAAEAPAA
STEVSAPAAKAASSEEGQGEGGGEEGQKDGSPGGGGAKGDEGKEDENEDE
KRKRLEEEEKARIAEEEEEIRKADEEEMMRKAEEEEETRRLIKGGAEALS
KVAGKEVAAKVEAFVLEGVTIRGKDKRRLTLPTSDKLSRTKVYVVLKDFL
SKYVLAETVDEPASISTQSPAATTEDATAEGKEKVGAEAKAADSGSAGAE
GAATATAVAGEKKDGSSPEADEAGNGDTAADETKTASPLKKKRKVDGENG
GGAPADEKTDEKTDEKTGEKTAEKAAAAAVKKPDPNGPKCVQLKMKPDWR
KAGGGKRRRGDLDKRDRGGRGGSRWAWPEGRPEYCRFVLYKENSDTMGAV
SRISKHFRFPGKIVGYAGTKDKRAVTAQWCTIKKRTIEELRTYNRPLGAF
QV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR020103PsdUridine_synth_cat_dom_sf