prot_L-elsbetiae_contig651.15203.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig651.15203.1
Unique Name	prot_L-elsbetiae_contig651.15203.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	88

Homology

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BLAST of mRNA_L-elsbetiae_contig651.15203.1 vs. uniprot
Match: D8LN47_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN47_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 4.800e-41
Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = 0

Query:    2 FRIYVFVLAFVLVVHFIACGFWFVSRATDPDFEGLWTPDEDYLDLPVYRQYSRALYFSLVITYGNDLKPENDYEYIFSNVCLTLALL 88
            FRIY+FV  FVLVVHFIACG+WFVSR TDP+FEGLW P+++YLD  +Y++Y+RALYFSLVITYGNDLKPEND EY+FSN+CLTLALL
Sbjct:  424 FRIYIFVFTFVLVVHFIACGYWFVSRTTDPEFEGLWVPEQEYLDAALYKKYTRALYFSLVITYGNDLKPENDAEYVFSNICLTLALL 510

[Close]

BLAST of mRNA_L-elsbetiae_contig651.15203.1 vs. uniprot
Match: A0A6H5JMZ2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 7.600e-41
Identity = 66/87 (75.86%), Postives = 79/87 (90.80%), Query Frame = 0

Query:    2 FRIYVFVLAFVLVVHFIACGFWFVSRATDPDFEGLWTPDEDYLDLPVYRQYSRALYFSLVITYGNDLKPENDYEYIFSNVCLTLALL 88
            FRIY+FV  FVLVVHFIACG+WFVSR TDP+FEG+W P+++YLD  ++ +Y+RALYFSLVITYGNDLKPEND EY+FSN+CLTLALL
Sbjct:    2 FRIYMFVFTFVLVVHFIACGYWFVSRTTDPEFEGVWVPEQEYLDAGLFEKYTRALYFSLVITYGNDLKPENDVEYVFSNICLTLALL 88

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig651.15203.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig651.15203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LN47_ECTSI	4.800e-41	78.16	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5JMZ2_9PHAE	7.600e-41	75.86	Cyclic nucleotide-binding domain-containing protei...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 1..84
None	No IPR available	PANTHER	PTHR10217:SF435	POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAG	coord: 1..84
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..88
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 2..86
None	No IPR available	TMHMM	TMhelix		coord: 4..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig651	contig	L-elsbetiae_contig651:22342..23622 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig651.15203.1	mRNA_L-elsbetiae_contig651.15203.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig651 22342..23624 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig651.15203.1 ID=prot_L-elsbetiae_contig651.15203.1|Name=mRNA_L-elsbetiae_contig651.15203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
VFRIYVFVLAFVLVVHFIACGFWFVSRATDPDFEGLWTPDEDYLDLPVYR
QYSRALYFSLVITYGNDLKPENDYEYIFSNVCLTLALL