mRNA_L-elsbetiae_contig6506.15197.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI) HSP 1 Score: 565 bits (1457), Expect = 1.580e-201 Identity = 270/277 (97.47%), Postives = 273/277 (98.56%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKV 831 GCRALTR SLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALE+QGLVLEWMGYSRKNFTFP DQLFPHSSF+QELQYL AH HLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEK+ Sbjct: 101 GCRALTRQSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKI 377
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A835ZL65_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL65_9STRA) HSP 1 Score: 412 bits (1059), Expect = 1.230e-140 Identity = 196/285 (68.77%), Postives = 235/285 (82.46%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYK------------EACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819 GCRALTR LD++C RA+CTIL ++SN +LDAYVLSESSLFVY HKVV+KTCGTTTLLRC+A LLQ A G+ LEW+GYSRKNFTFPGDQL+PH+SF+QEL YL H HL RL+G+G+VLGPVTGDHWFVY+ADK DRP++TATDR IN+MMFD+HPD A F + A GR+MT +G+A+LVPGA VD AF+PCGYSMNAI ++SYYTIHVTPE +CSYASFETNNP++SYRSI+NNVLNVFRP+R+VLTM+AD+AGL T+ E+PFD Sbjct: 116 GCRALTRAQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRHKVVVKTCGTTTLLRCIAYLLQHAGRGLGMELEWVGYSRKNFTFPGDQLYPHASFEQELDYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRVINIMMFDLHPDCAAKFVRGDAAAGADGTAVSARAAGRDMTVASGVADLVPGATVDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLNVFRPRRFVLTMMADEAGLKTMAESPFD 400
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A835YIR2_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR2_9STRA) HSP 1 Score: 401 bits (1030), Expect = 4.930e-137 Identity = 195/286 (68.18%), Postives = 233/286 (81.47%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGL--VLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKE-----------ACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819 GCRALTR LD++C RA+CTIL ++SN +LDAYVLSESSLFVY +KVV+KTCGTTTLLRCVA LLQ A GL LEW+GYSRKNFTFPGDQL+PH+SF+QEL YL H HL RL+G+G+VLGPVTGDHWFVY+ADK DRP++TATDR N+MMFDMHP++A F ++ A G MT +GIA+LVPGA +D AF+PCGYSMNAI ++SYYTIHVTPE +CSYASFETNNP++SYRSI+NNVL VFRP+R+VLTM+AD+AGL T+ ENPFD Sbjct: 63 GCRALTREQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRYKVVIKTCGTTTLLRCVAYLLQHAGAHGGLGLELEWVGYSRKNFTFPGDQLYPHASFEQELAYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRICNIMMFDMHPESAACFVRDDIGPDGRHTTTARAAGHAMTVASGIADLVPGAAIDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLGVFRPRRFVLTMMADEAGLKTMAENPFD 348
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: W7T3C1_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3C1_9STRA) HSP 1 Score: 372 bits (954), Expect = 4.320e-124 Identity = 180/272 (66.18%), Postives = 218/272 (80.15%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQ--AALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITEN 810 GCR LTR LD +C +A+CTIL+Q+SN Y DAYVLSESSLFV+P K+++KTCGTTTLLRC+ LL+ AAL GL LEW+GYSRKN++FPGDQ FPHSSF QEL YL +H+ L +LNG+GYVLGPVTGDH++VY+AD+C RP Y DR +N+MMFDM P+ A FYKE +EMT+K+GIA+LVPGA +D FAFDPCGYSMNAI Y +Y TIHVTPE CSYASFETN P KSY S+INNVL VFRP+R+VLTM+AD+A + + N Sbjct: 149 GCRELTRRQLDVLCRKARCTILNQMSNAYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLRYTAAL---GLELEWVGYSRKNYSFPGDQAFPHSSFDQELSYLRSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPEAAAVFYKEQSGDAKEMTQKSGIADLVPGASIDAFAFDPCGYSMNAITYGNYATIHVTPEADCSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADQAAVLEMESN 417
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA) HSP 1 Score: 352 bits (902), Expect = 3.860e-117 Identity = 165/273 (60.44%), Postives = 211/273 (77.29%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819 GCR L R SL+R+ +RAKCTI+ +SN +LDAYVLSESSLFVYP+KVV+KTCG TTLLRC+ LL+ A G LEW+GYSRKNF +P QLFPH+SF E+ YL H+ +L+G+ ++LGP+TGDHWFVY+ADK +RP +DRTIN+MMFDMH D A+ FYK+ PT E T +GI L+PGA +D F+PCGYSMNAI +DSY TIH+TPE +CSYASFETN +SY ++I NVL +FRP+R+VLTM AD+AGL +++E+PF+ Sbjct: 103 GCRNLPRASLNRILTRAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYKDKYPTAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHITPESACSYASFETNTKLRSYTALIRNVLQLFRPRRFVLTMFADEAGLASLSEDPFE 375
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S0C0C1_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0C1_9STRA) HSP 1 Score: 336 bits (861), Expect = 9.040e-112 Identity = 162/288 (56.25%), Postives = 206/288 (71.53%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPD-YTATDRTINMMMFDMHPDTAKHFYKE--------------ACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819 G R + R LDR+C+RA+CTIL ISN YLDAYVLSESSLFVYP+ V+KTCGTTTLLRC+A L++ A GL ++W+GYSRKNF+FPGDQ FPH SF QEL+YL +H +L +RL G GY LGPVT DHWFV++AD+ +R + T TDR +N+MMFD+ A HFY + + MT++ GI L PGAV+D AF+PCGYSMNAIL+ SY T+H+TPE+ SYASFETN SY S+INNV+ +F PKR+V+T++AD+ GL + PFD Sbjct: 22 GLRKIARTDLDRVCARARCTILSSISNQYLDAYVLSESSLFVYPYMAVLKTCGTTTLLRCIAILIELA-RTVGLEIDWVGYSRKNFSFPGDQAFPHESFHQELEYLSSHHNLSERLQGNGYTLGPVTSDHWFVFVADQTNRANSQTDTDRVLNIMMFDIDQTVASHFYYDQYEGQMEGESEDEAVSRISKTMTRRAGIDSLCPGAVIDPRAFEPCGYSMNAILFQSYSTMHITPEDGSSYASFETNQRVSSYNSLINNVIRMFNPKRFVMTLMADELGLEQMDSTPFD 308
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A8J2WZ11_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ11_9STRA) HSP 1 Score: 333 bits (854), Expect = 1.640e-110 Identity = 162/274 (59.12%), Postives = 205/274 (74.82%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAH-AHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFY------KEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTI 801 GCR LTR LD + A+CTIL ++SN +LDAYVLSESSLFVY HKVV+KTCG TTLLRC+ L+Q A GL LEW+GYSRKN+ FP DQ+ PH F+ EL+YL AH EK +G+GYVLGP+TGDHWFVY++D+C+RP +AT+RT+N+MMFD+ D +HF+ + GR MT+++G+ L+PG V DD AF PCGYS+NA+ ++SY T+HVTPE SCSYASFETN KSY S++ NVL VFRPKR VLT+ AD+AGL + Sbjct: 50 GCRGLTRAQLDCILEEARCTILSRMSNAHLDAYVLSESSLFVYAHKVVVKTCGRTTLLRCLRRLVQEATSTLGLQLEWVGYSRKNYCFPDDQVAPHGCFEDELRYLKAHQGDAEKVFDGSGYVLGPLTGDHWFVYVSDQCERPASSATERTVNVMMFDLPEDVRRHFHLQGDEDSDLRAAGRAMTQRSGLKALIPGKV-DDHAFAPCGYSLNALSFESYTTVHVTPEASCSYASFETNTALKSYGSLVKNVLAVFRPKRVVLTLFADEAGLREL 322
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S2YHD0_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHD0_9STRA) HSP 1 Score: 328 bits (840), Expect = 2.190e-107 Identity = 164/286 (57.34%), Postives = 201/286 (70.28%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTA-TDRTINMMMFDMHPDTAKHFYKEACPTG--------------REMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENP 813 G R L RP LDR+C RA+CTI+ +SN +LDAYVLSESSLFVYP+ +V+KTCGTTTLLRC+ L+ GL ++W+GYSRKNF FPGDQ FPH SFQQEL YL +H L RL+G GY LGPVTGDHWFVY+AD R TDR +N+MMFD+ A+ F+ + TG +E T K+GI EL PGAV+D AF+PCGYSMNAIL+ SY TIH+TPE SYASFETN KSY+S+I+NV+ FRPK + LT++AD+ GL + ENP Sbjct: 103 GLRRLARPDLDRICERARCTIISSVSNRFLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIKILIDLG-HRLGLEIDWVGYSRKNFNFPGDQSFPHQSFQQELDYLYSHRSLCDRLDGNGYTLGPVTGDHWFVYVADHTTRKTSEFDTDRVLNIMMFDIDETVAQKFHYDQYKTGIEGESKDDEMNRISKEQTVKSGINELCPGAVIDPRAFEPCGYSMNAILFHSYSTIHITPEAGSSYASFETNQKVKSYKSLISNVIRTFRPKHFCLTLMADEGGLLEMKENP 387
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A1Z5JP29_FISSO (Adenosylmethionine decarboxylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP29_FISSO) HSP 1 Score: 326 bits (836), Expect = 4.350e-107 Identity = 163/287 (56.79%), Postives = 203/287 (70.73%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTA--TDRTINMMMFDMHPDTAKHFYKEACPTGRE--------------MTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENP 813 G R LTR LDR+C+RA+CTIL ISN YLDAYVLSESSLFVYP+ +V+KTCGTTTLLRC+ATL+ GL ++W+GYSRKNF FPGDQ FPH SF QEL YL +H +L +RL+G+GY LGPVTGDHWFV++AD+ R TDR +N+MMFD+ A+ FY + TK GI L PGA++D AF+PCGYSMNA+L+ SY T+H+TPE SYASFETN SY+S+I+NV+ FRPKR+V+T++AD+ GL ITENP Sbjct: 87 GLRNLTREQLDRICARARCTILSCISNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIATLIDLG-RTLGLEIDWVGYSRKNFNFPGDQSFPHQSFHQELDYLYSHRNLCERLDGSGYTLGPVTGDHWFVFVADQTLRSKALDCDTDRVLNIMMFDIDEQVAELFYYNRYQESDDEPIAENDMKRIAAAQTKAAGIDSLCPGALIDSAAFEPCGYSMNAVLFRSYSTMHITPETGSSYASFETNQKVSSYKSLISNVIRTFRPKRFVMTLMADEGGLQQITENP 372
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: B8C3Z3_THAPS (Adenosylmethionine decarboxylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Z3_THAPS) HSP 1 Score: 320 bits (819), Expect = 5.180e-107 Identity = 154/262 (58.78%), Postives = 194/262 (74.05%), Query Frame = 1 Query: 1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDR-PDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADK 783 G R L R LDR+C RA+CTIL +SN YLDAYVLSESSLFVYP+ +V+KTCGTTTLLRCVATL++ + GL ++W+GY+RKNF FPGDQ+FPH SF QE+ YL +H +L +RLNG GY LGPVT DHWFV++AD R + TDR +N+MMFD+ A+ FY + + TK GI LVPGA +D AF+PCGYSMNAIL+ SY T+H+TPEE SYASFETN +Y +I NV+ FRPKR+V+T++AD+ Sbjct: 1 GLRTLPRSDLDRICQRARCTILSSVSNRYLDAYVLSESSLFVYPYMIVLKTCGTTTLLRCVATLIEIG-RKIGLEIDWVGYNRKNFNFPGDQMFPHGSFHQEMDYLYSHRNLCERLNGNGYTLGPVTSDHWFVFVADHTTRYTECNDTDRVLNIMMFDIDQTVAQKFYYDQYESRIHQTKGAGIDALVPGATIDPRAFEPCGYSMNAILFHSYSTMHITPEEGSSYASFETNQKLSNYTPLICNVVRAFRPKRFVMTLMADE 261 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6506.15197.1 >prot_L-elsbetiae_contig6506.15197.1 ID=prot_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKback to top mRNA from alignment at L-elsbetiae_contig6506:4945..7468- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6506.15197.1 ID=mRNA_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2524bp|location=Sequence derived from alignment at L-elsbetiae_contig6506:4945..7468- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6506:4945..7468- >mRNA_L-elsbetiae_contig6506.15197.1 ID=mRNA_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig6506:4945..7468- (Laminarionema elsbetiae ELsaHSoW15)back to top |