mRNA_L-elsbetiae_contig6499.15177.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6499.15177.1
Unique NamemRNA_L-elsbetiae_contig6499.15177.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A6H5L234_9PHAE (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L234_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 2.840e-128
Identity = 204/340 (60.00%), Postives = 229/340 (67.35%), Query Frame = 1
Query:    1 QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLL-EKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATG---------------DGGAEGT-----HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957
            ++ E +S WFWPVHGRT+LPPVRQ MEVFAVRMC AYPDLFLT V+KELKDFRLPGQVLCSLLII GHTL+  + G +  HRV MF ACLPW+VGTHVMGR+IAQLVCHSVLPE +A                 DGGA        HL ALF FL DNP+M     RQLE   +TDC ALCTV GMLEAHG G+ G++ P HMCEL K+ MDEIWNEALL DK + LE+G  WLQT AAV SG WF+E+  R G                       +      G        HIQQKIIPWD LDLT+ SA+SASLEQSTAAGR RQPV+MCASLVDKV
Sbjct:   28 KLAETISGWFWPVHGRTALPPVRQHMEVFAVRMCRAYPDLFLTAVVKELKDFRLPGQVLCSLLIITGHTLIGNESGLSARHRVLMFRACLPWVVGTHVMGRLIAQLVCHSVLPEFAAAAXXXXXXXXXXXXXGLDGGATRIVHGEPHLQALFDFLHDNPEM-----RQLEAFGQTDCDALCTVEGMLEAHGTGAAGEITPTHMCELFKETMDEIWNEALL-DKVQVLEDGRAWLQTAAAVDSGAWFEEEGGRAGA-------------GAADGVGEEAGLSLKSGXXXXXDSSHIQQKIIPWDTLDLTVASATSASLEQSTAAGRVRQPVIMCASLVDKV 348          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: D7FX90_ECTSI (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX90_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 3.860e-120
Identity = 224/338 (66.27%), Postives = 251/338 (74.26%), Query Frame = 1
Query:    1 QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLL-EKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSAT----------GDGGAEGT--------HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957
            ++ +A+S WFWPVHGRT+LPPVRQ MEVFAVRMC AYPDLFLT V+KELKDFRLPGQVLCSLLIIAGHTLL  + G +  HRV MF ACLPW+VGTHVMGR+IAQL CHSVLPE +AT          G+G   G         HL ALF FL DNP+M+ MR+RQLE   +TDC ALCTV GMLEAHG G+ G++ P HMCEL K+ MDEIWNEAL+ DK + LE+G  WLQT AAV SG WF+E        XXXXXXXXXXXXXXXXXXXXX                HIQQKIIPWD LDLT+ SA+SASLEQSTAAGR RQPVVMCASLVDK+
Sbjct: 1295 KLAKAISEWFWPVHGRTALPPVRQHMEVFAVRMCRAYPDLFLTAVVKELKDFRLPGQVLCSLLIIAGHTLLGNESGLSARHRVPMFRACLPWVVGTHVMGRLIAQLFCHSVLPEFAATASAAXXXXDSGNGVGGGATRIVHGEYHLQALFDFLHDNPEMIKMRRRQLEAFGQTDCEALCTVEGMLEAHGTGAAGEITPTHMCELFKETMDEIWNEALV-DKVQVLEDGRAWLQTAAAVNSGAWFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------------SSHIQQKIIPWDTLDLTVASATSASLEQSTAAGRVRQPVVMCASLVDKM 1618          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A7S4N1C3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1C3_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.200e-21
Identity = 91/340 (26.76%), Postives = 154/340 (45.29%), Query Frame = 1
Query:    1 QVVEAVSAWFWP-----VHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLLEKGGS----AGAHRVQMFEA---CLPWMVGTHVMGRVIAQLVCHSVLP-ECSATGDGGAEGT--------HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957
            ++ EAV+A  +      +HG+     +R  +EVF ++    +P +F    +KE++   L  Q + SL+I+ G+ ++ +  S     G   V + E    CLPW+  T    R IAQL+ H ++P     TGD   E          +L  ++ FL  NP+M  +R++Q       D  + CT  G+L+   V    +  PVH+ + +K+ +  ++ E+   +   T ++    L   A  K     D+  E G E                                 D+   + Q+KI+P D L+L +E + + S+    AAGRARQ +++CASL+DKV
Sbjct: 1125 EIAEAVAARIFESMTMILHGQ-----IRYFIEVFCIQYARTHPAVFGRAYVKEIRRKDLNLQHVSSLMIVGGNLIVGRYASDFMREGTEVVPIHEVLAGCLPWLSSTQGFSRAIAQLLTHKLIPLVVDITGDNMNENEPITANNDWYLRTMYEFLEQNPEMRRLREKQRRFFFAYDAESACTADGLLKI-SVDEGDEADPVHLADAVKRCLKNVFLESQANE-CPTWKKADEQLSQLADQKD----DDVAESGDES-------------------------------SDSPLVNFQRKILPIDALNLAMEESRAESMRN--AAGRARQGLIVCASLIDKV 1420          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: K0T6G3_THAOC (SpoU_methylase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6G3_THAOC)

HSP 1 Score: 103 bits (256), Expect = 1.170e-20
Identity = 90/332 (27.11%), Postives = 150/332 (45.18%), Query Frame = 1
Query:   10 EAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLLEK------GGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSAT--------GDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKA--RTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957
            +A SA    +HG      +R  MEVF ++    +PD+F T +I++++   L  Q + SLLII G+  + +        S            LPW+  T    R IAQL+CHS++P+            G+   + + L +++ FL +N DM  +R++Q +     D  ++ T+ G+L    VG   +  P H  + +K+ + E ++EA ++D    + +E+ L       A+       E+E  G E                                 +A   + Q+KI+P D LDL + S S   L    AAG+ +Q +V+CA+LVDKV
Sbjct:  497 KAFSALSNNLHGE-----IRYFMEVFLIQSTRIHPDVFGTRLIEDIQKPSLTLQQVSSLLIIGGNLTIGRYSCDFFRSSKDVRMKGFLVGALPWLSSTQGFSRAIAQLLCHSLIPQVVDVSVELDRDEGNQLKDESVLRSVYTFLEENSDMSRLRKKQEDFFQTYDVDSVTTLGGLLSIP-VGDGEEANPEHKIDAIKECLAETYDEAHVEDAPVWKQMEDLLINADCNQAL------GEEENEGIED--------------------------------EAQLVNFQRKILPIDALDLALRSISEQHLHN--AAGKQKQKLVVCATLVDKV 782          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A2D4CC22_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC22_PYTIN)

HSP 1 Score: 80.9 bits (198), Expect = 4.690e-13
Identity = 57/192 (29.69%), Postives = 91/192 (47.40%), Query Frame = 1
Query:    7 VEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFL-TGVIKELKDFRLPGQVLCSLLIIAGHTLLEK--GGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPE----CSATGDGGAEGTHLGALFL--------FLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAP 537
            +EA SA FW     T LP VR  MEV  +++ + +P   L T ++  L+DF L  QV  SLL++ G    ++    S+ A   ++  A  PW+  +H   RV+AQ +   +LP       + GD    G+ + A  L        FLS+N +   M +RQ +       A  CT+ G+L +  +    ++ P
Sbjct: 1365 LEAFSARFWRAFTSTQLPNVRFYMEVLGMQLALRFPSRTLPTHLLPLLRDFSLTPQVGASLLLVVGVVAHQRLAANSSDAWTDELLVALFPWLNASHGHTRVMAQFLLGMLLPRYLHRVDSDGDRSGSGSRVDAATLASFREIARFLSENKECKRMFRRQAKQFESFSPATQCTMLGLLSSSSLNDVQELFP 1556          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A397A851_9STRA (SpoU_methylase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A851_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 8.760e-11
Identity = 77/308 (25.00%), Postives = 129/308 (41.88%), Query Frame = 1
Query:   52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957
            +LP +R  +E+FA+R+ VA+P      +   L++  L  Q+  SLL++A  +L  L    +   H +      +PW+  TH   R I Q V  ++LP   A     +    L     +LS N +   M +RQ + +   +    CT+ G+L    +    ++ P+ + E +K+++   + + L +D+           Q  A+V  G+      +    P                     S         GD     +Q+KI P     LD  +    + SL  +Q  A  R  QPVV+CASLVDK+
Sbjct:  209 NLPQIRYFIELFAMRVAVAFPKSSFPHIQALLQNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEAPPPS--------------------SFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 487          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: W4GMU9_9STRA (SpoU_methylase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMU9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.710e-10
Identity = 76/308 (24.68%), Postives = 128/308 (41.56%), Query Frame = 1
Query:   52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957
            +LP +R  +E+FA+R+ VA+P      +   L++  L  Q+  SLL++A  +L  L    +   H +      +PW+  TH   R I Q V  ++LP   A     +    L     +LS N +   M +RQ + +   +    CT+ G+L    +    ++ P+ + E +K+++   + + L +D+           Q  A+V  G+      +                          S         GD     +Q+KI P     LD  +    + SL  +Q  A  R  QPVV+CASLVDK+
Sbjct: 1077 NLPQIRYFIELFAMRVAVAFPKSSFQHIQALLQNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEA--------------------PPSSSFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 1355          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A5D6YAI5_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAI5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.800e-10
Identity = 81/339 (23.89%), Postives = 135/339 (39.82%), Query Frame = 1
Query:   13 AVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTG-VIKELKDFRLPGQVLCSLLIIAGHTLLEKGGS--AGAHRV--QMFEACLPWMVGTHVMGRVIAQLVCHSVLP--------------ECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKI----IPWDNLDLTIESASSASLEQSTAAGRAR-QPVVMCASLVDKV 957
            AV+  FW       LP +R  +E+FA+R+ + +P + +   V+  L DF L  QV  SLL++A + L  +  +  A  H +   +  A LPW+   H   R++ Q +  +VLP              E   T +G  +   L     FLS N +   M +RQ + L +    + C++ G+L +  V    ++ P                           ++ L + +   A  + ++   Q E                          S      G+   AL  ++Q+KI    I  D   L +       +  + AA ++R QPV++CASLVDKV
Sbjct: 1166 AVNERFWRTFAVPHLPALRHYLELFAMRLLLRFPRVTVAQCVVPLLADFNLTPQVGASLLLVAAYALHHRVDAPLASDHDLCALLVRAVLPWLHAAHGHTRILVQFLLATVLPRYLSQLEQPSSQSQEAPPT-EGAVDVAFLRQTARFLSQNKEAKRMHRRQRQQLAKFRPESACSLLGVLSSAAVSDGLELLPS--------------------------DDALAFGEQFKAAMAALFAQFQREHA--------LLAPVAASPPSPLASRSAAGVGAGATPAALSLNVQRKIDRSAILLDESVLPVAMQERGEVVAALAARQSRRQPVILCASLVDKV 1469          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A3L6VX44_9STRA (SpoU_methylase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VX44_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.060e-9
Identity = 76/310 (24.52%), Postives = 127/310 (40.97%), Query Frame = 1
Query:   52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLII----AGHTLLEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957
            +LP +R  +E+FA+R+ VA+P      +   L++  L  Q+  SLL++        LL    +   H +      +PW+  TH   R I Q V  ++LP   A     +    L     +LS N +   M +RQ + +   +    CT+ G+L    +    ++ P+ + E +K+++   + + L +D+           Q  A+V  G+      +    P                     S         GD     +Q+KI P     LD  +    + SL  +Q  A  R  QPVV+CASLVDK+
Sbjct:  535 NLPQIRYFIELFAMRVAVAFPKSSFPHIQALLQNVHLMPQLSASLLLVRVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEAPPPS--------------------SFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 815          
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A024UUB9_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUB9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.790e-9
Identity = 78/327 (23.85%), Postives = 134/327 (40.98%), Query Frame = 1
Query:    7 VEAVSAWFWPVHGRT-SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGH---IQQKIIPWDNL---DLTIESASSASLEQSTAAGRAR-QPVVMCASLVDKV 957
            V+A+   FW       +LP +R  +E+FA+R+ VA+P      V K L +  L  Q+  SLL++A  +L  L    +   H +      +PW+  TH   R I Q V  ++LP   +     +    L     +LS N +   M +RQ + +        CT+ G+L    +    ++ PV + E +K+++   + + L +D+        G  Q+T A    ++      +                                    DA   H   +Q+KI P       +L  ++ +    +Q   A R R QPV++CASL+DK+
Sbjct: 1053 VDAIHDLFWHKSFLNHNLPQIRYFIELFAMRVAVAFPTSSFPHVQKLLGNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLSHEATASRVAFLQPTLRYLSTNKECKRMFRRQTDQMASFQPEKECTLAGLLGGT-LNEFDEIVPVSIVEQIKESLSASFAQFLKEDRHHG-----GQYQSTVAGSLQLFPSVTSSQD------------------------DVALPTAAGTNDASVSHDQIVQRKIDPNATAFLDELLAQTQAETLRDQQVNARRQRHQPVIVCASLIDKI 1348          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L234_9PHAE2.840e-12860.00SpoU_methylase domain-containing protein n=1 Tax=E... [more]
D7FX90_ECTSI3.860e-12066.27SpoU_methylase domain-containing protein n=1 Tax=E... [more]
A0A7S4N1C3_9STRA1.200e-2126.76Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0T6G3_THAOC1.170e-2027.11SpoU_methylase domain-containing protein (Fragment... [more]
A0A2D4CC22_PYTIN4.690e-1329.69DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A397A851_9STRA8.760e-1125.00SpoU_methylase domain-containing protein (Fragment... [more]
W4GMU9_9STRA8.710e-1024.68SpoU_methylase domain-containing protein n=5 Tax=A... [more]
A0A5D6YAI5_9STRA8.800e-1023.89SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A3L6VX44_9STRA1.060e-924.52SpoU_methylase domain-containing protein n=5 Tax=A... [more]
A0A024UUB9_9STRA2.790e-923.85SpoU_methylase domain-containing protein n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6499contigL-elsbetiae_contig6499:283..5399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.9
Seed ortholog evalue1.4e-106
Seed eggNOG ortholog2880.D7FX90
Preferred nameTARBP1
KEGG koko:K15333
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0019219,GO:0019222,GO:0022613,GO:0030488,GO:0031167,GO:0031323,GO:0031326,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070039,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.enzyme-directed rRNA 2'-O-methylation
EggNOG OGsCOG0566@1,KOG0839@2759
EC2.1.1.34
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016,ko03036
Exons6
Model size957
Cds size957
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6499.15177.1prot_L-elsbetiae_contig6499.15177.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6499 283..5399 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.8753245-CDS-L-elsbetiae_contig6499:282..4231622816716.8753245-CDS-L-elsbetiae_contig6499:282..423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 283..423 +
1691683761.656467-CDS-L-elsbetiae_contig6499:282..4231691683761.656467-CDS-L-elsbetiae_contig6499:282..423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 283..423 +
1622816716.8879642-CDS-L-elsbetiae_contig6499:1256..13521622816716.8879642-CDS-L-elsbetiae_contig6499:1256..1352Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 1257..1352 +
1691683761.6701646-CDS-L-elsbetiae_contig6499:1256..13521691683761.6701646-CDS-L-elsbetiae_contig6499:1256..1352Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 1257..1352 +
1622816716.899489-CDS-L-elsbetiae_contig6499:1811..19941622816716.899489-CDS-L-elsbetiae_contig6499:1811..1994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 1812..1994 +
1691683761.6806822-CDS-L-elsbetiae_contig6499:1811..19941691683761.6806822-CDS-L-elsbetiae_contig6499:1811..1994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 1812..1994 +
1622816716.9152617-CDS-L-elsbetiae_contig6499:3139..32831622816716.9152617-CDS-L-elsbetiae_contig6499:3139..3283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 3140..3283 +
1691683761.6920393-CDS-L-elsbetiae_contig6499:3139..32831691683761.6920393-CDS-L-elsbetiae_contig6499:3139..3283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 3140..3283 +
1622816716.929044-CDS-L-elsbetiae_contig6499:4118..44121622816716.929044-CDS-L-elsbetiae_contig6499:4118..4412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 4119..4412 +
1691683761.7063618-CDS-L-elsbetiae_contig6499:4118..44121691683761.7063618-CDS-L-elsbetiae_contig6499:4118..4412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 4119..4412 +
1622816716.9395878-CDS-L-elsbetiae_contig6499:5300..53991622816716.9395878-CDS-L-elsbetiae_contig6499:5300..5399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 5301..5399 +
1691683761.7174757-CDS-L-elsbetiae_contig6499:5300..53991691683761.7174757-CDS-L-elsbetiae_contig6499:5300..5399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6499 5301..5399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6499.15177.1

>prot_L-elsbetiae_contig6499.15177.1 ID=prot_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=319bp
QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELK
DFRLPGQVLCSLLIIAGHTLLEKGGSAGAHRVQMFEACLPWMVGTHVMGR
VIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEI
LNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQ
DKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPEEQEQDPARKHSSAG
GGGGGGSGSGGSGGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQST
AAGRARQPVVMCASLVDKV
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mRNA from alignment at L-elsbetiae_contig6499:283..5399+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6499.15177.1 ID=mRNA_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5117bp|location=Sequence derived from alignment at L-elsbetiae_contig6499:283..5399+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGTCGAGGCTGTCTCTGCCTGGTTCTGGCCCGTTCACGGGAGGAC CTCGCTCCCGCCGGTGCGGCAGCTCATGGAGGTGTTCGCCGTCAGGATGT GCGTGGCCTACCCTGACCTGTTCTTGACCGGGGTCATCAAGGTGGGTGGG TGGGTGGTGTGAGCGCAGTTCCGCTGCGCCCCGGTGGGTCGGTCGTAACA ATATATTGGTGTTTTTTTTCGCATTTTGTTTTTCACGCGCCCTTCGTCTG GCAAAACAACTGCTTGAACTCTTCTGATATTTTAGGGTGTTTTTCTGCTC GCCTCGCCAAATATTACGTCACTGTATGGAATACCGTTTGAACCCCATAT CGAGTCCTTGCTCTAGTGTGGGGTAGGTTCCATCTTTGATTCATTGTTTA TTGTAAGAAGCAATATTGACGAATCGTAGGTAGGTACTCCGTGCCGTGGA GGAAACGATGCGCCTGTACAATACAGTTCGATGCGGAGTACAAAGCACCG GGTGTCTAGTCAGGTGTTGTTGTTGTTATTGGATGGACAGGAGAGACAAA AGGGAAAAAAGAAAAGCTTTGCTTGGAAACGTCCTTGTTTCGAATGTTGG AAGGAGACGCTGGCCCGTCAGCCGTCGAGTGAGCGAACAAACCGCATTGC GTCCGTCAGCACGTTGGCTGCTGTTCCTGTCCTGTCTCCTCTCTGATCTA GTGCCGATCGACGACCGCTTGCGCGCGCCAAACAAACCTCGCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCCCCCACCCCCC CCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCGCACAACAACACCA AAAATGACCGCAACATCACCACCGTCATCATCGTCGAAATCACCATCATC CTCATCAACAACAACAACAACAACAACAACAACAACAACGATAACGACGA CAACAACGGCAACGACAACATCAGGAGCTCAAGGATTTCCGACTTCCCGG ACAGGTTCTGTGCAGCCTTCTCATCATCGCCGGGCACACGCTCCTCGAAA AAGGGGGCTCGGCCGGTGCGGTCCTCGGCATGCCGGTATCCTTCTCTTCT TGGCCCTTCCTCTCCTTCCTTCCTTCTTCCTTTGTTTCGTTTTCTTTCTT TTTTTTCTCCATGTTTTTTTTTTTCTTTTTGCTATTTTCTTGCTCGTGTT CCTTCGTCCCTGCTGCTGGTTTCCCGATTCCTCTTCTTTTTTTCGTGACA CAAAAATGAAAGGCAAAGGGTTGTTTTATATGGCATCGGTTTTCCTTTGT AGATAATTTACAACAGAAGACGGACGAAGCCACATTATTGGGCATCCCAC ACCCCGTCTAGAAATGCTTTTTGCTTCCGGAGGAAGAACACGCTTTATTT TCAGGGTTTAAACCACCAAAGGTTTGCCTTTCCATGATGCGCCTTTACGC AGGAGGAGGCGGCAGCAGCGGCGGCGGCAGCAGCAGCGGCGGCGGCACCA GCAGCAGCAGCAGCAGCCTTTCCGCGCAGCACCGCGTCCAGATGTTCGAG GCGTGCCTGCCGTGGATGGTGGGCACGCACGTGATGGGCAGGGTGATCGC CCAGCTCGTCTGCCACTCCGTTCTGCCGGAATGCTCGGCGACCGGGGACG GCGGCGCCGAGGGCACCCACCTCGGCGCTCTGTTTCTCTTCCTGAGCGAC AACCCCGACATGGTATTTTTATGATAGAAGCAGGCACGATAGAACCCAAG CACGAGCATACATGGCTTCGTTTTTTTTTTGCCTGGGTGTGCATACTTCT AGTTTTCTTTTCTCTTCTAACCGATACCCACACGTTTTACCAGCGCTCGG GCGTACTTTATTTTTACTATGTTTCACTTCTGTAGGGGGCGCACAACAGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCTCNNNNNNNNNNCCCCG CCCCCGGGCGGCCTTGGTTTTGCCCGCCTTCCCCCTCCGCCCGGGGCGCC CCCCCCCCCCCCCCCCCCCCCTCTTTTCCGCGATTCTCCCTCCCTCCCTC CCTCCCTCCCCCCAATCTTTGCGGTGCTTGCTTTCAATGTTTGCGTACAT ATTTAGCAGCAAGGCAACAGTTCGGCAGCCCGCCTCCCTCGTCGCACCCA CATACGGCGTTAAAGCCATTCAGTGATGATTGATTTTACTTGACGGGGTT GAAAACCATTTGGTGGTGGTAATTTATTTTATGTTGTGTAAGAGGGTGTA CTGCTGGTAACGTCGTTGGAGAGTTGTGAGCTCTCGTCGCTCTGCGGACG GCAGGAGTGCTCTGTCTATCGAGCTACAACGACACGTTGAATGACAGGCC ACACATGTGCTTATACGCACATAAGTAGTATTGACGGAGCCGCGCTTAAA TCCCCCTGTGTTTCCTGCTCCAGATTAACTAGTTTCGAGGTATTTGTTTC GCATTGATTGGGCGTTTTTATCATCTCTCCCTTTCCTCTTCCTTCAAGTG CGACAGACACTTGGTGTGTGTTTCCCTATTCGCGCCCCAAGATCACTTCC GTGTGGACGCTGTTTGATCCTCAAGGCGCATTCCGAGCCGAGTTGGACCC GCGCTCATCCACCATCCCAAGTATACACAGGTCCTGGCCTAGATAGATAA AACGAAGCAGCTGCGCGTGATTTGTTTGCTGTGCTACGCCAATTGATTTT TGATCACCTGGACACAGGTATGTGCCGAACCCCACACTTCTACCCCCCCC CCCCCCTCCGTGCGTGTTTTTTTATGGGTACCCCCCCCACGAAAATATGC AAACAAGGTGAATATGCGACAGAGGCAGCTTGAGATTCTCAACCGAACCG ACTGTGCGGCACTCTGCACCGTGAGGGGAATGTTGGAAGCGCACGGCGTC GGTTCCACGGGCGACGTCGCTCCCGTCCACATGTGCGAGCTCCTGAAGAA GGTGTGTACGGTACCTTGTAGAACCCTGTCGACCCTACGAGGCACTTCTT GATTTGGCGTCGTCGTTGCTGTCGTTTTCGCAATCGCTGTTGTTGGTGGT GTTGGCGGCGTTGGCGGCGTTGGCGGCGTTGGCATCGTTGGCGGCGGCGG CGGCGGTAAGTGTTTTGTCGTCGCTGTTGCTGTTGTTATTGGTTTCCTCA TTCTGCGTGTTGGGCGGCAGCCGACAAGACACAAGTGACAATTGAAGGCC ACAACAGTGCCGCATAGCAGGAGGGGCTGGCTGCTCTTGGCATGCCATGC CACACACAATTTTACGCGCTCACGGTGTCGAGCCATTGTATGTATAGAGA TGCCATGGGGCGCTGATCCCTCCACCTCCACCTCTTGGCGCGAGCCCCCA ATCGATAAATCGACCGATTGACTTGCCTGCTCCGTCGGCCGTATCTGTCG GGTCACCGTGGAGTGGGGTGCGGGAGCCTGTTCTACTGATAAACTAGCGG CAGGTTATGCGTGCCCCCCCCCCCCCGGCGGTGAATGCTTCTTGTGTGAG CGCACGAACACCCTCCCCGTGCGCCCGAACCTCTGACAACAACAGCAACA ACAACAACAACAACAACAACAACAACAACAACAACAGCAACAAAAGCAAC AACAAACATATCATCATCATCATCAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAAACAGCAAACAACAACATTAGCAG CAACACAACAACAACAACAACAACAATAACAATAACAACGACGTCCACCA CCACCACCAACAACAACAACGACAACGACTACCCAGGCGATGGACGAGAT CTGGAACGAGGCGCTCCTCCAGGATAAGGCCCGGACTCTCGAGGAAGGCC TGGGGTGGCTGCAGACCACGGCGGCCGTCAAGAGCGGGGTGTGGTTCGAC GAGCAGGAAGAGAGAGGGGGAGAACCAGAAGAGCAAGAGCAAGACCCTGC CAGGAAACACTCTTCTGCAGGGGGCGGCGGCGGCGGTGGCAGCGGCAGCG GGGGCAGCGGCGGCAGCTGTGGAGACGCTTTGGACGGCCACATCCAGCAG AAAATAATCCCCTGGGACAACCTCGATCTGGTGAGATAAGATGAGATGAG AGGAGGCGAGATGAGAGAGCAGTGTTCTTGTCTCGCCGTTCCTTACAGGC TTGTCTGCCTGCCTGCCTGCCTGTCTGCCTGCCTGTGTTGCCAAACTCAA GACCTGGTCGACGAAGTCCGCTCCAATGTGTGCTGTGCAAGGCTGTGTTC ATTCCGCGCGCCCAGCTACGGCACCACCACCGTTGATGTCGCCCAGATGC CACGCCCCCCCCCTCCCACCCCCCGCGTGGTTTAGTTTCGGGAGCTCTAC TGATGTGACCCGCAGGAGGGAATCCCGGTGGGTGCCGATACCGACAAGAC CGATCCATCTTCGAGATGGGTCTTAGCGAAACCTCTCCAACTGCGCCGGC CCTTGAGGGCGTTTGACGCTCTCGAGGCGTAGGGCTGGACCTCCTATGCT TTTGCATAGTAAATAAGCATAAACAGCATCAGTAAACCGAGCATAAGGGA ACATACTTGCCACTTTTAAGCATACATACTTTGAGCATAATTCGCCTTTT TTTCTTTTTTTGGAGCAAAACGAGTGTAATTGATATTTTTAAAAAAGTAT TGCTCGTTTTAAACACTCCCAATTACGCTCATTTTGCTCCAAAAAAAGGC GAATTGTGCTCAAAATGTACGTGAGAGTGCCAAGTATTCTCACTTATGCT CGAATTTTTTACTTATGCTTTTTATGCCTACTATACAAAAGCATAGGAGG TCAAGCCCTATCCTTATCTTGTTTTGGTGGGGATTGGTACCCCCTCGCCG TCGCTCTTTTCATGCCGCGCCTAAATCGTGTGCTTGTGTACGGCGCTCCC TGCCCCCCCAACCCCACTCCACCCCCCTTCTTGTTTGATCCGGCGCCCAC CTCTCTCTTCCACTTCAGACGATCGAATCGGCGAGTTCCGCGTCCTTGGA GCAGTCTACCGCCGCGGGCAGGGCCAGGCAGCCCGTGGTCATGTGCGCCT CTCTCGTCGACAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6499:283..5399+

>mRNA_L-elsbetiae_contig6499.15177.1 ID=mRNA_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1914bp|location=Sequence derived from alignment at L-elsbetiae_contig6499:283..5399+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGTCGAGGCTGTCTCTGCCTGGTTCTGGCCCGTTCACGGGAGGAC
CTCGCTCCCGCCGGTGCGGCAGCTCATGGAGGTGTTCGCCGTCAGGATGT
GCGTGGCCTACCCTGACCTGTTCTTGACCGGGGTCATCAAGCAGGTGGTC
GAGGCTGTCTCTGCCTGGTTCTGGCCCGTTCACGGGAGGACCTCGCTCCC
GCCGGTGCGGCAGCTCATGGAGGTGTTCGCCGTCAGGATGTGCGTGGCCT
ACCCTGACCTGTTCTTGACCGGGGTCATCAAGGAGCTCAAGGATTTCCGA
CTTCCCGGACAGGTTCTGTGCAGCCTTCTCATCATCGCCGGGCACACGCT
CCTCGAAAAAGGGGGCTCGGCCGGTGCGGAGCTCAAGGATTTCCGACTTC
CCGGACAGGTTCTGTGCAGCCTTCTCATCATCGCCGGGCACACGCTCCTC
GAAAAAGGGGGCTCGGCCGGTGCGCACCGCGTCCAGATGTTCGAGGCGTG
CCTGCCGTGGATGGTGGGCACGCACGTGATGGGCAGGGTGATCGCCCAGC
TCGTCTGCCACTCCGTTCTGCCGGAATGCTCGGCGACCGGGGACGGCGGC
GCCGAGGGCACCCACCTCGGCGCTCTGTTTCTCTTCCTGAGCGACAACCC
CGACATGCACCGCGTCCAGATGTTCGAGGCGTGCCTGCCGTGGATGGTGG
GCACGCACGTGATGGGCAGGGTGATCGCCCAGCTCGTCTGCCACTCCGTT
CTGCCGGAATGCTCGGCGACCGGGGACGGCGGCGCCGAGGGCACCCACCT
CGGCGCTCTGTTTCTCTTCCTGAGCGACAACCCCGACATGGTGAATATGC
GACAGAGGCAGCTTGAGATTCTCAACCGAACCGACTGTGCGGCACTCTGC
ACCGTGAGGGGAATGTTGGAAGCGCACGGCGTCGGTTCCACGGGCGACGT
CGCTCCCGTCCACATGTGCGAGCTCCTGAAGAAGGTGAATATGCGACAGA
GGCAGCTTGAGATTCTCAACCGAACCGACTGTGCGGCACTCTGCACCGTG
AGGGGAATGTTGGAAGCGCACGGCGTCGGTTCCACGGGCGACGTCGCTCC
CGTCCACATGTGCGAGCTCCTGAAGAAGGCGATGGACGAGATCTGGAACG
AGGCGCTCCTCCAGGATAAGGCCCGGACTCTCGAGGAAGGCCTGGGGTGG
CTGCAGACCACGGCGGCCGTCAAGAGCGGGGTGTGGTTCGACGAGCAGGA
AGAGAGAGGGGGAGAACCAGAAGAGCAAGAGCAAGACCCTGCCAGGAAAC
ACTCTTCTGCAGGGGGCGGCGGCGGCGGTGGCAGCGGCAGCGGGGGCAGC
GGCGGCAGCTGTGGAGACGCTTTGGACGGCCACATCCAGCAGAAAATAAT
CCCCTGGGACAACCTCGATCTGGCGATGGACGAGATCTGGAACGAGGCGC
TCCTCCAGGATAAGGCCCGGACTCTCGAGGAAGGCCTGGGGTGGCTGCAG
ACCACGGCGGCCGTCAAGAGCGGGGTGTGGTTCGACGAGCAGGAAGAGAG
AGGGGGAGAACCAGAAGAGCAAGAGCAAGACCCTGCCAGGAAACACTCTT
CTGCAGGGGGCGGCGGCGGCGGTGGCAGCGGCAGCGGGGGCAGCGGCGGC
AGCTGTGGAGACGCTTTGGACGGCCACATCCAGCAGAAAATAATCCCCTG
GGACAACCTCGATCTGACGATCGAATCGGCGAGTTCCGCGTCCTTGGAGC
AGTCTACCGCCGCGGGCAGGGCCAGGCAGCCCGTGGTCATGTGCGCCTCT
CTCGTCGACAAGGTGACGATCGAATCGGCGAGTTCCGCGTCCTTGGAGCA
GTCTACCGCCGCGGGCAGGGCCAGGCAGCCCGTGGTCATGTGCGCCTCTC
TCGTCGACAAGGTG
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