mRNA_L-elsbetiae_contig6498.15175.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: A0A6H5KRC0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC0_9PHAE) HSP 1 Score: 518 bits (1335), Expect = 4.320e-169 Identity = 350/673 (52.01%), Postives = 402/673 (59.73%), Query Frame = 2
Query: 263 QSVVKIASRSEVVSTDLTPAAMQQESTPIGGASLRRAAGKSGRNLQRLYTRVRAAATLAWTPXXXXXXXXXXXXXXXXXXXXXRDNNPLLRVGLGTLVSRRACSTILREVQEIDVWEPWDGDLGAGAAVATALESLPRSRALWAGKMGDGVCERIAGLYGVPQSSVVADASRVFVCKFGADDGGDRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAMRWRRXXXXXXXXRSVTPAAEFRRSKSLVTFFVALSAEDGGRSS-WAVCLEQRGECIWPGDQGSGVIFSGKIRHASVVGTQADRTSGGGGVSXXXXXDESALQ-HPP-VVLRGFASILHPSVLQESGGWQWGSPAWHVDAPWIKDQDILDRVWMGGRSGAAPEATG---PSPAAGEAGA-EAAAAASAVEVPGGYYLERMNSTLAHRYYRQGLGGMEVPVVDPLGRPVIDLVEDNGLFSLLSRIPGVGWDPTGMVTTSAVLRRRFPWDRRRR-------------------------------------RQVGKAGFSTQAGASPRMDAALQELFGGASGG---------SVAAG----AGGSVGESFVGVPVPPIKYVFVDPRFRGLGLGRRLFLEAMRSLARRGFRFALIVVEDNGSGGLFGFYEDMGFVRAEELLGLPRAMIAPIPPPAG 2110
+SVVKI SRSE+ + L Q+ G A+ K+ RNL+RLY R R+ L+ T NPL+RVGLG L+S R C+TI+RE ++D W PWDGDLG A + T+LE LPRSRALW GK GD V R+AGLYGV +SS+V +A +FVCK G + G R XXXXXXXX XXXXX+ A++FRRS+SL+TF VA+S ED WAVCLEQRGEC PG QG+GVIFSGK+RHAS+ R G G E Q HPP ++LRGFA+I HP V + S WQWGSPAWH+DAPWI+DQDILDRVW+ G + EA P PA G A A EA A + V+ P YL+RMN+TLAHRYYRQGL GM+VPVVD GRPVIDLVED G S L R +G D G VT AVLRRRFPW RRR+ KAG ST AGASPRMDAALQ+LFG +S V AG A VGV VPPIKYVFVDPR+RGLGLG+RLFLEAMRSLARRGFRFALIVVEDNG+GGLFGFYEDMGFVRAEE LGLPRAMIAPIPPP G
Sbjct: 27 ESVVKIISRSEMSTVWL------QQRDRTGEANT---VSKARRNLRRLYARARSTWALSRTQPSYPDATSLPA------------GNPLMRVGLGGLMSPRDCNTIVREALQVDDWTPWDGDLGKHA-LGTSLEKLPRSRALWDGKAGDRVRARVAGLYGVQESSIVVNA--LFVCKVGLNVDGLRDEVLREGQGRSVGTLHEAVDRAAAXXXXXXXXXXXX------XXXXXQLSIEASDFRRSRSLLTFSVAISTEDALLPCPWAVCLEQRGECFRPGGQGTGVIFSGKLRHASL------RIPHGAGAPASSGNSERPRQDHPPALLLRGFANIRHPLVAEGSARWQWGSPAWHIDAPWIRDQDILDRVWVAGGTDLGAEAADGRHPPPAGGAAAASEAGTAPAGVDPPRSNYLQRMNTTLAHRYYRQGLAGMDVPVVDSAGRPVIDLVEDGGGGSSLWRRGVIGADKPGEVTLKAVLRRRFPWSRRRQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGLSTAAGASPRMDAALQQLFGSSSTSYXXXXXXXEQVVAGDSPLAARQQVSPLVGVTVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPPPDG 663
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: D8LFR9_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR9_ECTSI) HSP 1 Score: 408 bits (1049), Expect = 7.710e-129 Identity = 234/378 (61.90%), Postives = 258/378 (68.25%), Query Frame = 2
Query: 1073 QRGECIWPGDQGSGVIFSGKIRHASVVGTQADRTSGGGGVSXXXXXDESALQHPPVVL-RGFASILHPSVLQESGGWQWGSPAWHVDAPWIKDQDILDRVWMGGRSGAAPEATGPSPAAGEAGAEAA------------------AAASAVEVPGGYYLERMNSTLAHRYYRQGLGGMEVPVVDPLGRPVIDLVEDNGLFSLLSRIPGVGWDPTGMVTTSAVLRRRFPWDRRRRRQVGKAGFSTQAGASPRMDAALQELFGGASGGS---------VAAG----AGGSVGESFVGVPVPPIKYVFVDPRFRGLGLGRRLFLEAMRSLARRGFRFALIVVEDNGSGGLFGFYEDMGFVRAEELLGLPRAMIAPIPPPAG 2110
+RGEC PG QG+G+IFSGK+RHAS+ D G G S + S +HPPV+L RGFASI HPSV +ES WQWGSPAWH+DAPWI+DQDILDRVW+ S + GAEAA A + V+ P YYL+RMN+TLAHRYYRQGL GM+VPVVD GRPVIDLVED G+ S R +G D G VT AVLRRRFPW RRR QVGKAG ST AGASPRMDAALQ+LFG V AG A G VGVPVPPIKYVFVDPR+RGLGLG+RLFLEAMRSLARRGFRFALIVVEDNG+GGLFGFYEDMGFVRAEE LGLPRAMIAPIPPP G
Sbjct: 150 KRGECFRPGGQGTGIIFSGKLRHASLRIPHGDGAPAGSGNS-----EGSRQEHPPVLLLRGFASIQHPSVAEESARWQWGSPAWHIDAPWIRDQDILDRVWVASGS--------------DLGAEAADGRHPXXXXXXXXXXXXGTAPAGVDPPRSYYLQRMNTTLAHRYYRQGLAGMDVPVVDSAGRPVIDLVEDGGVSSWWRR-GVIGADKPGEVTLKAVLRRRFPWSRRR--QVGKAGLSTDAGASPRMDAALQQLFGSXXXXXXXXXXXXXXVVAGDSPLAARQQGSPLVGVPVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPPPDG 505
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: A0A836CMF2_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF2_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.430e-32 Identity = 115/337 (34.12%), Postives = 154/337 (45.70%), Query Frame = 2
Query: 1103 QGSGVIFSGKIRHASVV------GTQADRTSGGGGVSXXXXXDESALQHPP-----VVLRGFASILHPSVLQESGGWQWGSPAWHVDAPWIKDQDILDRVWMGGRSGAAPEATGPSPAAGEAGA----EAAAAASAVEVPGGYYLERMNSTLAHRYYRQGLGGMEVPVVDPLGRPVIDLVEDNGLFSLLSRIPGVGWDPTGMVTTSAVLRRRFPWDRRRRRQVGKAGFSTQAGASPRMDAALQELFGGASGGSVAAGAGGSVGESFVGVPVPPIKYVFVDPRFRGLGLGRRLFLEAMRSLARRGFRFALIVVEDNGSGGLFGFYEDMGFVRAEELLG 2068
+G+G + K+RH + + GT ADR S A H P VL G A ++HP++ + W+ G+PAWHVD PW+++ ++LDR W PA G A A AA A + G + + AHRY RQ G V L R + + + PG R F +++RR +G+AGF + G+S MDAA+ LFGG G + VPV P+ YV+VDPR+RG GLGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG
Sbjct: 222 RGTGALLCSKLRHTATLHVNAPHGTAADRGS--------------ASPHEPGAIAAAVLCGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCWR------------VDPAQGGACALQQRSDAAPADSTASEGQRFALTLLDCAAHRYLRQR-GSAAPEVTLQLQR---EGKTEEYTMRAYAECPG------------PQRRAWFRTNKQRRICIGRAGFRSTTGSSAAMDAAIWGLFGGQ----------GGLSAPQRMVPVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASAHLG 506
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: A0A835ZI96_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI96_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.960e-31 Identity = 125/370 (33.78%), Postives = 173/370 (46.76%), Query Frame = 2
Query: 1004 LVTFFVALSAEDGGRSSWAVCLEQRGECI-WPGDQGSGVIFSGKIRHASVV------GTQADRTSGGGGVSXXXXXDESALQHPPVVLRGFASILHPSVLQESGGWQWGSPAWHVDAPWIKDQDILDRVWMGGRSGAAPEATGPSPAAGEAGA-----EAAAAASAVEVPGGYYLERMNSTLAHRYYRQGLGGMEVPVVDPLGRPVIDLVEDNGLFSLLSRIPGVGWDPTGMVTTSAVLRRRFPW---DRRRRRQVGKAGFSTQAGASPRMDAALQELFGGASGGSVAAGAGGSVGESFVGVPVPPIKYVFVDPRFRGLGLGRRLFLEAMRSLARRGFRFALIVVEDNGSGGLFGFYEDMGFVRAEELLG 2068
L++F+V L A G ++ + LE + + + + +G + K+RH + GT ADR S + A+ VL G A ++HP++ + W+ G+PAWHVD PW+++ ++LDR W PA G A A +AA A S + L ++ AHRY RQ G V L R + D + PG RR W +++RR +G+AGF + G+S MD A+ ELFGG G S A VPV P+ YV+VDPR+RG GLGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG
Sbjct: 240 LMSFYVPL-ALSGAEAAATLSLELQDSGLRFELARDTGALLCSKLRHTVTLNVSAPHGTAADRGSAS-------PREPGAIV--AAVLFGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCWR------------VDPAQGGACALQQRSDAAPADSTASEGQRFALTPLDGA-AHRYLRQR-GSAAPEVTLQLQR---EGKTDEYTMHAYAECPGP---------------RRRAWRGTNKQRRICIGRAGFRSTTGSSAAMDTAIWELFGGQGGLSAPPRA----------VPVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASTHLG 557
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: A0A7S2ETE7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETE7_TRICV) HSP 1 Score: 65.5 bits (158), Expect = 2.050e-8 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 2
Query: 1712 RRRQVGKAGFSTQAGA-SPRMDAALQELFGGASGGSVAAGAGGSVGESFVGVPVPPIKYVFVDPRFRGLGLGRRLFLEAMRSL-ARRGFRFALIVVEDNGSGGLFGFYEDMG 2041
R++++ + G +TQ G SP +DAA+ +++ G F GV I Y+FV+P FRG GLG L LEA+ ++ A +G F ++V +D+GSG L G+YE+ G
Sbjct: 88 RKKKIARFGITTQRGPPSPVIDAAVLDIY----------------GVDFAGVGAAAIVYMFVEPEFRGRGLGD-LALEAIGAIHAAQGCDFTVLVADDDGSGKLVGWYEERG 182
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Match: A0A7R9U5H2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H2_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 5.770e-5 Identity = 29/70 (41.43%), Postives = 39/70 (55.71%), Query Frame = 2
Query: 1886 VFVDPRFRGLGLGRRLFLEAMRSLARRGFRFALIVVEDNGSGGLFGFYEDMGFVRAEELLGLPRAMIAPI 2095
+FVDP FRG GLG L LE +R GF ++ +D G+G L FY D+GF EL + M+A +
Sbjct: 223 MFVDPSFRGRGLGYLLILEGVRRCRHLGFSHIMLTPQDTGAGSLVRFYTDLGFAWVPEL---EKTMVADV 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6498.15175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6498.15175.1 >prot_L-elsbetiae_contig6498.15175.1 ID=prot_L-elsbetiae_contig6498.15175.1|Name=mRNA_L-elsbetiae_contig6498.15175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=597bp MQQESTPIGGASLRRAAGKSGRNLQRLYTRVRAAATLAWTPPPPPSPPPSback to top mRNA from alignment at L-elsbetiae_contig6498:126..3064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6498.15175.1 ID=mRNA_L-elsbetiae_contig6498.15175.1|Name=mRNA_L-elsbetiae_contig6498.15175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2939bp|location=Sequence derived from alignment at L-elsbetiae_contig6498:126..3064+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6498:126..3064+ >mRNA_L-elsbetiae_contig6498.15175.1 ID=mRNA_L-elsbetiae_contig6498.15175.1|Name=mRNA_L-elsbetiae_contig6498.15175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3582bp|location=Sequence derived from alignment at L-elsbetiae_contig6498:126..3064+ (Laminarionema elsbetiae ELsaHSoW15)back to top |