mRNA_L-elsbetiae_contig649.15170.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig649.15170.1
Unique NamemRNA_L-elsbetiae_contig649.15170.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.440e-126
Identity = 192/276 (69.57%), Postives = 229/276 (82.97%), Query Frame = 1
Query:    1 MTESSLSQGDGGYGYS--SSQAAQAALYAEQFSLKCDAGFIVVGLQDGEAVATPVRVIATLVTISVASAWFSRRKSIKKLLLFFGHWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822
            MT SSL    GGYG +  SSQAAQAALYAE FSLKC+AGF VVGLQ+GEAV TP+RVI+TL+T+SVASAWFSRRKSIKKLLLFF HWL+GLLHQL +M EATM+SVCW GD L  LIKT KF ELA+ +MLAITNLAICVNLAL+VMSHRTL+RV+S S+P+L+ +FLALS+G AA +VPFW   V+SGT FWV ++++    WI V+ F+VEFFVGICM  IV WL++FR+ E+K+ WK+H RIRYYFGLT+I T VNLALGICGTIY + D +E
Sbjct:    1 MTSSSL----GGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 2.500e-103
Identity = 157/279 (56.27%), Postives = 207/279 (74.19%), Query Frame = 1
Query:   94 LKCDAGFIVVGLQDGEAVATPVRVIATLVTISVASAWFSRRKSIKKLLLFFGHWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAG 930
            L C+ GF  +GLQ+GE   TP+RV++TLV++SV SAW S  K +K+L LFF HWL+GL+  L ++ E  M++VCWT   L G IK  KF+E  S +M+AIT+LAICVNLAL+V SHRTLTRV+SVSSP L+ L LA+S+G  +  VP W+   + GTGFW+ ++D+     + VSIF++EF VGICMF I+AWLLLFR KEVKECW++  RIRYYF LT++GTAVN+ +GIC T++ I D  E  L + +W  RY+HVALDT VLYGVL  +++DER G
Sbjct:    5 LSCETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTK-VKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGG 282          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 5.040e-93
Identity = 163/279 (58.42%), Postives = 199/279 (71.33%), Query Frame = 1
Query:  286 MAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAGSPSSTTVAAGSSG----SQGRPAPAPAAPAKRSRFSNNPGLREWSGLSKRSSSSSHGHVSFSSG 1110
            M + TMISVCW G+ L G IK  K+LE  S +MLAITNLAIC+NLALVV SHRTL+RV SVS+P+L+ LFLA+SV AAA +VPFW  TV+SGT FWV + D+ ++ WI VSI  +EF VGICMF IV+WL+ FR + +KECWKLH RIRYYF LT+IGTAVNLALGI G  Y  R    + L+ +TWAFRY HVALDTIVLYGVLG R++DE  GS +ST+    SSG    S G P P           SN+ G+++ SGLS  SS++S G V  + G
Sbjct:    3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGT--SSGRLPASSGLPRP-----------SNHRGMKKQSGLSNTSSTASGGAVCSTQG 268          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.730e-88
Identity = 133/201 (66.17%), Postives = 160/201 (79.60%), Query Frame = 1
Query:  301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLG 903
            M+ VCW G ++ G +K  KFLEL + +MLAITNLAIC NLALV+MSHRTL RVKS SSPSL+FL LA+S+  A  A PFW  TV+SGTGF V + D+    W+AVS F++EF VGICMF IVAWLLLFR  EVKECWK+H RIRYYFGLT+IGT VNLALG+CGTIY +  + + LL+V+TW FR++H+ALDT VLYGVLG
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLG 201          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.100e-83
Identity = 123/223 (55.16%), Postives = 169/223 (75.78%), Query Frame = 1
Query:  262 GLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAG 930
            G++  L ++ E  M++VCW G +L  LIKT KF+ELAS HMLA+T+LAICVNLAL+V SHRTL RV+SVSSP L+ L LA+S+G  A  VP W+  ++ GT FW+ ++D+ +   + VSIF++EF VG+CMF IVAWLLLFR KEVKECW++H RIRYY  LT++GT ++L++GIC T++ +   ++  L +  W FRY+H+ALDT VLYGVL  +++DER G
Sbjct:   11 GIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVG 233          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 4.020e-80
Identity = 128/212 (60.38%), Postives = 159/212 (75.00%), Query Frame = 1
Query:  301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAGSP 936
            MISVCW G++LA  IKT KFLEL + +MLAITNLAICVNL+L+VMS R  + VKS+S+  L+ LFLALS G AA AVPFW  TV+SGTGFW    ++    ++ +S F VEF VGICMF IV+WLLLFR  E+KECW +H  +RYYFGLT++GT  NL LG+CGTIY I D    LL++ +W FR V +ALDTIVL+ VL  ++VDERA +P
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETP 212          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 5.000e-75
Identity = 118/223 (52.91%), Postives = 157/223 (70.40%), Query Frame = 1
Query:  259 AGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERA 927
            +G L  LA M E  M+S C+   +L GLIKT  F+ + S +MLA TNL IC+NLAL+V SHRT+TRVK+VSSP ++F+ L +S   AA  VP W+ TV+ GT FW  ++D  ++ +I +SI+ +EF VGICM  IV WL +FR  E+KECW+ H RIRYYF LT+ GTAVNL LGICG  Y   D++E L  + +W FRY+H++ DT+VLYG L   ++DERA
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERA 231          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.520e-71
Identity = 117/178 (65.73%), Postives = 141/178 (79.21%), Query Frame = 1
Query:  292 EATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTR-VKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822
            +ATMISVCWTG +L  LIKTFKFLELAS +MLA+TNLAIC+NLALVVMSH      V S+SSP L+ + L +S+GAAA A PFW++ ++SGTGF+  + ++  S WI +S FY+EFFVGICMF IVAWLLLFR  E+KECWK+H RIRYYFGLT+I T VNL LGICG IY I D+ E
Sbjct:    2 QATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 7.990e-70
Identity = 113/172 (65.70%), Postives = 135/172 (78.49%), Query Frame = 1
Query:  301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDK 816
            MISVCW G+ L G IK  K+LE  S +MLAITNLAIC+NLALVV SHRTL+RVKSVS+P+L+ LFLA+SV AAA +VPFW  TV+SGT FWV + D+ ++ WI VSI  +EF VGICMF IV+WL+ FR + +KECWK+H RIRYYF LT+I TAVNLALGI G  Y  RD 
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172          
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.290e-67
Identity = 123/236 (52.12%), Postives = 146/236 (61.86%), Query Frame = 1
Query:  250 HWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTR---------------------------------------------VKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822
            H+  GLL+QL  + +ATMISVCW G +L  LIKTFKFLELAS +MLA TNLAIC+NLALVVMS                                                   V S+SSP L+ + L +S+GAAA A PFWD+ ++SGTGF+  + ++  S WI VS FY+EFFVGICMF IVAWLLLFR  E+KECWK H RIRYYFGLT+I T VNL LGICG IY I D+ E
Sbjct:    7 HFSCGLLYQLLILMQATMISVCWAGANLIKLIKTFKFLELASVNMLATTNLAICINLALVVMSESINNTSPSAPHGICSLLPLSGTSVCGLLSLVLPTVGDTAQLQSHGDQQPGVNSLSSPLLIMVSLVISIGAAAAAAPFWDFIILSGTGFFPETENQRGSDWITVSRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKTHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 242          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LNM4_ECTSI2.440e-12669.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK5_ECTSI2.500e-10356.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8K6_9PHAE5.040e-9358.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN1_ECTSI2.730e-8866.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTK4_ECTSI2.100e-8355.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP0_ECTSI4.020e-8060.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWL8_9PHAE5.000e-7552.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI1.520e-7165.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN2_ECTSI7.990e-7065.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZY2_9PHAE2.290e-6752.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig649contigL-elsbetiae_contig649:25218..32584 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-08_006590.1
Exons5
Model size1469
Cds size1197
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig649.15170.1prot_L-elsbetiae_contig649.15170.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig649 25218..32312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.2772784-CDS-L-elsbetiae_contig649:25217..254771622816716.2772784-CDS-L-elsbetiae_contig649:25217..25477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 25218..25477 +
1691683761.2417192-CDS-L-elsbetiae_contig649:25217..254771691683761.2417192-CDS-L-elsbetiae_contig649:25217..25477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 25218..25477 +
1622816716.2875822-CDS-L-elsbetiae_contig649:28425..286001622816716.2875822-CDS-L-elsbetiae_contig649:28425..28600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 28426..28600 +
1691683761.2540405-CDS-L-elsbetiae_contig649:28425..286001691683761.2540405-CDS-L-elsbetiae_contig649:28425..28600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 28426..28600 +
1622816716.2985168-CDS-L-elsbetiae_contig649:29367..295231622816716.2985168-CDS-L-elsbetiae_contig649:29367..29523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 29368..29523 +
1691683761.278272-CDS-L-elsbetiae_contig649:29367..295231691683761.278272-CDS-L-elsbetiae_contig649:29367..29523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 29368..29523 +
1622816716.3109004-CDS-L-elsbetiae_contig649:30361..305911622816716.3109004-CDS-L-elsbetiae_contig649:30361..30591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 30362..30591 +
1691683761.2874048-CDS-L-elsbetiae_contig649:30361..305911691683761.2874048-CDS-L-elsbetiae_contig649:30361..30591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 30362..30591 +
1622816716.324415-CDS-L-elsbetiae_contig649:31936..323121622816716.324415-CDS-L-elsbetiae_contig649:31936..32312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 31937..32312 +
1691683761.295889-CDS-L-elsbetiae_contig649:31936..323121691683761.295889-CDS-L-elsbetiae_contig649:31936..32312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 31937..32312 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.3375492-UTR-L-elsbetiae_contig649:32312..325841622816716.3375492-UTR-L-elsbetiae_contig649:32312..32584Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 32313..32584 +
1691683761.3048072-UTR-L-elsbetiae_contig649:32312..325841691683761.3048072-UTR-L-elsbetiae_contig649:32312..32584Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 32313..32584 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig649.15170.1

>prot_L-elsbetiae_contig649.15170.1 ID=prot_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp
MTESSLSQGDGGYGYSSSQAAQAALYAEQFSLKCDAGFIVVGLQDGEAVA
TPVRVIATLVTISVASAWFSRRKSIKKLLLFFGHWLAGLLHQLAYMAEAT
MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTL
TRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRS
RWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLT
IIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVL
GARNVDERAGSPSSTTVAAGSSGSQGRPAPAPAAPAKRSRFSNNPGLREW
SGLSKRSSSSSHGHVSFSSGSSNRKTKVRDLSEDTSSTDKSRLPVQWD*
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mRNA from alignment at L-elsbetiae_contig649:25218..32584+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig649.15170.1 ID=mRNA_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7367bp|location=Sequence derived from alignment at L-elsbetiae_contig649:25218..32584+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGAGTCTTCTTTATCCCAGGGAGATGGCGGCTACGGTTACAGCTC TAGTCAGGCGGCCCAAGCTGCGCTCTACGCCGAACAGTTCTCCCTCAAGT GCGATGCCGGGTTCATAGTTGTGGGTCTTCAGGACGGAGAAGCTGTCGCG ACGCCTGTTCGTGTCATCGCTACCCTCGTCACCATCTCGGTTGCGTCGGC TTGGTTCAGCCGGAGGAAGTCGATCAAGAAGCTATTGCTCTTTTTTGGAC ACTGGCTAGCGTGAGTATGCGTTGCGTAATTTTAGTCCCCGGAGAGCGGA AACGCGTCCTAACCTCTACTATACATAGATTTCTACATTTGTGACATACA TGTGGTTTGAGGTGTGCACGCTGATCTGCTGTCTGCACTCTGTGGCAATG GCCAAGGGAGGCACCGTCGGATAAACTTTTCGGTACGCTGGGAGAGCATG TCCTACTCTATAGCGCTCGGGCAACTGCCTAAATATGTATGGTATGTAGT CTATGGAGATATATTGTGTTTTTGAGTACAACAAGAGTATATCTATTATA TATGTATAATATCCCCCGAATAGCTCCAGCTCCGCACCGGCTATTTGTGT GCTAAACACCAGAGATGGTGGTGTATCATGGCCGTTGTGCCTTATCGATG TACACTCTTCGGTCGAGCGAAAGGCTGATTGGTTCAAGTTGCAACATAGA GCATGTCGACAACACCGCTCCCTCTTTCTTCTTCATGAAGGCGCGTCAGA TAATCGTTCCGGATTGAATGATAAATCAGGTCCATGCAGGTCACGTGCCC TGTTTACAGGAGCGCGTGTTCCCACAAACAATATAATTTGCTGAGTGCCA CACCCAAATACTTCGTATATGTGTGTTCTTGAATTATGCCCGTCCCCTAA CCCCCTACTCCGAACTCTATGGCTGGTGCACACAGAGTGCCGTTGTGGTG TCTCCCGAAAACAACGAGCAATATGTAGACGCGTAATAAGTAGTATTGTG TGCGAAACTGGACAATTCGGTTGTTCTTATTTTTTCATGCATACGCCTTA GTGCCTACAAGTATAACCACTCTCATTGTCCTGCCGTGGTTTCGAGGTCC CTCTCGTACGCAGTATTTTGCCAGCTCCAATTTGATTGACTGGAACGCCT TGCGTTAATATTATAGCAGAGCCTGCATTTCAGCTCAGCACCAACACGGC TGACAAAGAGACAGCAGTAAGTCGTGCAGCATGCCAGAAACGTCGGGTTT TAGTTTTAAGCACCCTTGTTTTGCTTGCGCCTGCACAACTACCTATTGAT TGGCGTGGTCGAGGCTTCGAGTCTAACGGAGTGTACAGGCGTCGTTGCTA GGTAGAGAGACAGACCGGCCGACGTTGAGGAGATCCAAAACAGGCAGGAA TAGAGGGTTTACTTGCACTACCAGGAACTGAAGCCACGAGAAGTGAAAAC GTATAAGTACAGCAGTAGCCGCGTGCGGAAAACGTGCATGCACCGAAAAA GCCACTTCAAGGGTTAAGGAATAATTCGAAGAGTGTTCTGGACATCGATA TAGGAAGTAGAGAGATGTGTGCAAAGCAGATATATGTATTTTCGCGATCC ATTATTCGTGCACGTAGAATCCCTAGGTATCGCACCACGCCCTTCAGGTG TCCATAGGTAGAAAGGATAGTTCTCCTTTCATGGACCAAAACCATTCTGT ACCGATACCAACAAGAATCCTACCGTTGAAATCTATTCTGTATTTTCGGT TTTCCAAATCTGCACTCTCACATAGCGTGTCGAGGGAAGCGGAGAGCTCC AGACTATCTATGTCTGATTTGTTTTTTATCACTTTGCTGACCGTTCGGGT CTATTTTTATTTTTCAGTTACCCTGTGAGCGTTAGTTTAGCCTGTGGCCA CGGGAATCGACCGTGTCAATTGTTGGAAGGAGGGTGGAACGCGATGTAGC CACATCCCCCCTGAATACTCCGGCCAACACGAGTTGCACCCCCCCCCCCC CCCCCCCCCCCCCCCCCACACCCACACCACCACCCCCCCACCCAACACCA GCCAACACAACACAAACGGTCACNNNNNNNNNNACCCACCCCCCCCCCAA ACACCCCGCCCAACACCAGTCCCCCCCCCCCCCCCCCCCCACGTGCTCGC GCCCAAAACCAAAACTAGACTCCACCACTGATAGCTAGCAACATTGACGA AGTTGGCCACAAACAAACGCATGAATATGCGTACATCAGTGCGGGCAGAT CGAGGTACTGGGTAGAGAGATCGGAACTTTTTTTTTATTTGAAGACAACA CACAACAACTTTCCTCCAACGAGTGAGGCTGAAAAAAAAAGGAGCGTGCC ACCGGTTCTGGAACACAAAATAACCTTTATCGCTGATGGTGACGTCCGTT TGCGCAACGGAAAAGGCAAGGAGAGGAAGTTCATAGGATGGGTTGCATGC TGTTTCCCCCCCGGGTTTACACACGGCGCATTTTTCGCAGGCGAAACCCA CCTTCAACTACTTGCCTCGTTTTTGGTTCTTCGGATGCCATAACCACGTT TTGATCACCTCTCCGCAGTGCGGTCCTGCAAAGAAAGGAAGTTCGTAGAC TAGATAGCCCGATACCGTCCGTTGTGATGCTTAAATCCTACCAGTAGATA AGTATTTTTAAAACAAGGAGCTGTGTACATACATACAGAGGTTGAATCTG TCTCTGCCTGACAAATTTTGTGACAACGTAAATAGTGCTTCGAGCCCCCC CCCCCCCTACGCTCTCGGCCTGCCCCCCACCTAGCAGTCTTACTCAGTAA TAGTGCATACAACTTATGCATTTTTACACCATGGCCGCTATGGCCGCTCA GATGCGCGCCTTCTCGGGGTTTTCAGCAGATGACGCCCTATGTCCAATGA GACCACAGTAGTATTGTGGAAAGGTTGACTGCGCTCCTACTCGCTTTGCG GTGTTTTCAGCCAGTCGATACTTGTAAGCGTTTCGTCGGCGCAAGCTACA CAGGGTGTAAGTAAGGCCTGTTCGGCTCCGCTCTGCTATGTATCCCCGGT CGCCGATGTTTTTCATGCTCAAGAGTATTTCCCCCCCACCGATCCCCGGT CGACTGCCAACCGCCAAAAACCTGGATGGATGGATTGCGCGGCGACCTTG GCGCATGGGACGCGGCTATCCTTCACGGTGTTTCGTACGACGCCCCAACC GGCTCAAGTGGTCTGCTGCACCAGCTTGCGTATATGGCGGAGGCGACCAT GATATCGGTCTGCTGGACCGGCGACCACCTCGCCGGGCTCATCAAGACAT TCAAGTTCCTCGAGCTAGCCTCTGGACACATGCTGGCCATCACCAACCTC GCCATCTGCGTCAACCTCGCCCTAGTCGTCATGGTGAGTGAGTAAGCACG TGCCGCGTTTATCTGGAGCTTTGCCTGTGTACGTAGGATGGGGCCGGACA TCAGCTTTCGCCACTGTTTCTCTAGATATGCGCACTTCGCACAGCTACCC GCAGGTCCAACCAAAGAACCACGTGCCATATGCTTCAACCAACCTTGGTT CAGCTTGAAACAGCTCGTCCGATCCAGGTGCTCTTGGAGCTTGTCGCTCC TTTATCAATAGGAACGGCCAGGTGCGCAACCATTTTTTGGCCTGCATTGT GTTCTCTCGTTTGCACGGCTTGGGTCTTTGGCTTCCGAACCAGACTGTGT AAAGACCGCGTCTCTAGATTGGCGTCGCAAGTGTTGTTCTTGTCTGGTGT CCTTCCTCTTCTTGCTCACGGTTGCGGTAGGCAACCTTGCGCCTCCCTTT CAAATATTCTTCTTAAATAGTCCGATCCTGACTACACACTCCGATGCGTG CGGCTCAGAACGATAGAAGCACCCATGAAGTTCCTCACAGAAAAGGACAC ATGACACATACATACGTTCATATGAATCGCCGAAAGAGACAACCATACAA ACATCAAGTATTTTTCTCGGTCAGACGACGTGCCAGGGTTGTGCGCCTGC ACGGTTTTGTTTGCTGACTCCATGTCTCGTCATCGTCATCATCATCGTCG TCGTCGTTGTTGTTGCGCTGCCGCGGCGTCCTGCTCCTCTCCTTCGTTTC GCGGCCTGTCGGTGTCATGAACGGCGCCCGTCGATGCTGTGTTTTGACAG TCCCATCGGACCTTGACCCGCGTCAAGAGCGTGAGCTCGCCCTCGCTGAT GTTCCTCTTCCTGGCTCTCTCCGTCGGAGCGGCCGCCGGCGCCGTGCCCT TCTGGGACTACACCGTGATCAGCGGAACAGGCTTCTGGGTAGCGAGCAAC GACGAGGTAGGCCCCCGCCCGATCACGGTTGGTTGAAAAATCGACAACAT ACAATAAAACTTGCTTGTTGCGTGTGTTTTGGAAGTTAAATAAGATAATC AAAAACGGAAGCTAGCCCACATTTGAAACGGGAATCCGTGGGATTCAACC GGTATTCCATATAGTGACATCATATTGGTCCAGCTGTTTTGTTTTCTTCT TTCACAGCCATTGATTTCCCTCTCCTCTAGATAGTTTCTTGAGGTGGACT CCGTCCACCACCCACAGAAGTGTTGCAGTTACGTTTTACAATTCGCACGG ACACGTAGGGTCACGCGGCAGGATGCCGTGCCTCGAATGCTTGGATTGAT TTTCTGGTGCGTGCCTACCTACACGATTGAAGCAATAGTAGCGTTTACTT TCCCTCGACAATAGAGTCAAGTTGTGCGTGCACACCCACTGCCAGGGCGT TTTTTATATTTTTTATATTTTGCATTTTCAAGCCGAAAGTAGAACGCATG ATCTGACCGCCCAAGGTTCAAGAGTGCCTACATACATAACTCTAGGCCAC CAATTTGAGGTGTTGTCTCAGTGGTCGAGTAACTGGCGAGTGCACTTCAA TAGATACTCCAGTGCTTTACGATGGTCTAAAGACTCAAGTGCGAGGTAAT TGCTGTGATGTGTTTTTGGTTCCACGGCCATTGTTATCTAATACCCGACG CTGCGTTAACGCCGTGCCCTGCCCTCCTCAAGTTTTTGGTGCGTTCTATG ATATATAGTCTACCGTAAGCCTTGTTGTGCTCTTCAGCCCATTTGACATG TACCCCCCCCCCGGTGATAACAATTCCCACATCGGTGCATACAGCATCGC TCACGCTGGATCGCTGTATCCATCTTCTATGTCGAGTTCTTCGTCGGGAT CTGCATGTTCGCCATCGTGGCCTGGCTGCTGCTGTTTCGGAAGAAGGAGG TCAAGGAGTGCTGGAAACTGCACGTTCGCATTCGCTACTACTTCGGCCTC ACAATAATCGGCACTGCAGTTAACCTGGCCCTCGGCATTTGCGGCACGAT CTACACCATCCGCGACAAGAGAGAGTGAGTGAGCACCGTTTGGATGTACA TAGCAGCAACACAGAGGGAGAATACTGTACACAAAATCTAAATCAGGAGC GGGGAAACGAAACCATGCGATCTCATGCCGTAAATAATGCTCCGACTTCA GTGTTGACGAGGATGGGGAGTGCTGAACCCTGTTCGCGATAAAAACATCA CAAGCAGGCACCGCAGGAGAGGGTCAACCTCCCCCTTCCTGTGTGGCCCT GGTTGGGTCGTCTAGCCAGTCGTAGTGGAGGAAGGGGGGGCCAGTGGGGC AGACGACGAATAAGCCAATAATGGAAGGAAAAAAAAACAAAACAAAAAAT CTTGTGCCGAATGAAGAGGTACTTCTATTTATTTAGTAAGTTGGGGCGGG GTGAAGCGATTCGCTCGACGACACCCACGCGCCTTCCTGGTTGTCACCCG CACCGCCTTATCAAGGCGCGCTGCATCTGAGCGCGCAACAATACCTTCGG CAACCCCCGTAGACTAGAGCCTCCGTGGAGGTCGGGAAGCTGGCGGAAGG GGCAATAATAGGACGATGCGTCCTGGAGGAATATGTAGGGAGCTGTGCCC CGCCTAGTCTCGAAATGATCAACAGGACCGCATACAGTAGTACCCCGGAA ATTAAGTTTATCTAGGAAAATAACGCTAACCCTAGCCCCAACCACCGACC CCCCTTTCCCGGTTCCCATACTTTATCTCATATGTTAGCTGAAGACGAAA ACCCCATACTTTATCTCATATGTTAGCTCAAGATGAAAAGATGAAAACCC TGCGTAGACTACTGTTAATTCGGGTGCGAGGTCGGTTTATCAAACGACTA CATTACGTAGACTTGGCAAGACTTTGCAAGACTTTACAGTATGCGATCAG CAAACGAGTCTCCCCAAAAACTATCCGAGGAAGACCGCCTGCACAACCTC AGGTGTGCATATCCTCTCCCGATGACAGAGATCACGAGAGTGTTCCGGGC GTAACCCGTCTCACACCCCGTCATGACGACGTGCCATACGTACGTGCCAC GCCATGCTGTACATCTTATTGGCATGGGCATCGGGGATGGAAAACAGACC CTAGACGAGACACGAGGGTACAGCAGTATGCTGAATACTAATACTACTAT CTGGGTATGAAGCGCCGCTGGTATCATCATACCTTTGGAAGAAACTCCGC AGGGGGGCTGCTACATACATAAGGGTACAACACACACCTTTGGCAAACAC AATTCCATGAAAGAACAACCATGGCCACTGACTGTTCCCCCCCCTACCCG TGCGTGTGCTGGCGCGACCCACGCCCGTACCATGGCCTCCATCGTTCGTA TCCCAACACTCGGACCCAGGCAACTTCTTGTCGTGATCACGTGGGCGTTC AGATACGTCCACGTCGCTCTGGACACCATCGTCCTGTACGGGGTGCTGGG GGCGAGGAACGTCGACGAGCGCGCCGGCTCGCCGTCATCTACCACTGTCG CCGCTGGTTCGTCGGGCTCTCAGGGCCGTCCGGCGCCGGCGCCGGCGGCG CCCGCTAAGCGGAGTAGATTTTCGAACAACCCGGGCTTGAGAGAATGGAG CGGGCTGAGCAAGCGCAGCTCGAGCAGCAGCCACGGGCACGTCTCGTTCT CGAGCGGGAGTTCCAACCGAAAGACCAAGGTCAGGGATCTCTCGGAGGAC ACATCGAGCACGGACAAGTCTCGCCTGCCAGTGCAGTGGGATTGATTGGC CATTTCCGGCCTGGAGTGTGTCTGGGTGAGATACGGGTACATACCTTGTT TATCTTGTTTGTTTATACAAGTGTGTATGCCCCCCGCAGCTGGACGTACG CTGCTGGCTGATTCCTTAGGATATGTGCTCGCATCTATCGATCGGGCCCA AAGGAGAAAAGGCGAAAGGAATCTGGCACCTTAGGTGTTGCACAAGATGA CGCCATAAACAAAAGGTTGATTTTTCGGGCGTGCGTTTTTTCGATACGTT GGTGCTACGATTTGTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig649:25218..32584+

>mRNA_L-elsbetiae_contig649.15170.1 ID=mRNA_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2394bp|location=Sequence derived from alignment at L-elsbetiae_contig649:25218..32584+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGAGTCTTCTTTATCCCAGGGAGATGGCGGCTACGGTTACAGCTC
TAGTCAGGCGGCCCAAGCTGCGCTCTACGCCGAACAGTTCTCCCTCAAGT
GCGATGCCGGGTTCATAGTTGTGGGTCTTCAGGACGGAGAAGCTGTCGCG
ACGCCTGTTCGTGTCATCGCTACCCTCGTCACCATCTCGGTTGCGTCGGC
TTGGTTCAGCCGGAGGAAGTCGATCAAGAAGCTATTGCTCTTTTTTGGAC
ACTGGCTAGCATGACGGAGTCTTCTTTATCCCAGGGAGATGGCGGCTACG
GTTACAGCTCTAGTCAGGCGGCCCAAGCTGCGCTCTACGCCGAACAGTTC
TCCCTCAAGTGCGATGCCGGGTTCATAGTTGTGGGTCTTCAGGACGGAGA
AGCTGTCGCGACGCCTGTTCGTGTCATCGCTACCCTCGTCACCATCTCGG
TTGCGTCGGCTTGGTTCAGCCGGAGGAAGTCGATCAAGAAGCTATTGCTC
TTTTTTGGACACTGGCTAGCTGGTCTGCTGCACCAGCTTGCGTATATGGC
GGAGGCGACCATGATATCGGTCTGCTGGACCGGCGACCACCTCGCCGGGC
TCATCAAGACATTCAAGTTCCTCGAGCTAGCCTCTGGACACATGCTGGCC
ATCACCAACCTCGCCATCTGCGTCAACCTCGCCCTAGTCGTCATGTGGTC
TGCTGCACCAGCTTGCGTATATGGCGGAGGCGACCATGATATCGGTCTGC
TGGACCGGCGACCACCTCGCCGGGCTCATCAAGACATTCAAGTTCCTCGA
GCTAGCCTCTGGACACATGCTGGCCATCACCAACCTCGCCATCTGCGTCA
ACCTCGCCCTAGTCGTCATGTCCCATCGGACCTTGACCCGCGTCAAGAGC
GTGAGCTCGCCCTCGCTGATGTTCCTCTTCCTGGCTCTCTCCGTCGGAGC
GGCCGCCGGCGCCGTGCCCTTCTGGGACTACACCGTGATCAGCGGAACAG
GCTTCTGGGTAGCGAGCAACGACGAGTCCCATCGGACCTTGACCCGCGTC
AAGAGCGTGAGCTCGCCCTCGCTGATGTTCCTCTTCCTGGCTCTCTCCGT
CGGAGCGGCCGCCGGCGCCGTGCCCTTCTGGGACTACACCGTGATCAGCG
GAACAGGCTTCTGGGTAGCGAGCAACGACGAGCATCGCTCACGCTGGATC
GCTGTATCCATCTTCTATGTCGAGTTCTTCGTCGGGATCTGCATGTTCGC
CATCGTGGCCTGGCTGCTGCTGTTTCGGAAGAAGGAGGTCAAGGAGTGCT
GGAAACTGCACGTTCGCATTCGCTACTACTTCGGCCTCACAATAATCGGC
ACTGCAGTTAACCTGGCCCTCGGCATTTGCGGCACGATCTACACCATCCG
CGACAAGAGAGACATCGCTCACGCTGGATCGCTGTATCCATCTTCTATGT
CGAGTTCTTCGTCGGGATCTGCATGTTCGCCATCGTGGCCTGGCTGCTGC
TGTTTCGGAAGAAGGAGGTCAAGGAGTGCTGGAAACTGCACGTTCGCATT
CGCTACTACTTCGGCCTCACAATAATCGGCACTGCAGTTAACCTGGCCCT
CGGCATTTGCGGCACGATCTACACCATCCGCGACAAGAGAGAGCAACTTC
TTGTCGTGATCACGTGGGCGTTCAGATACGTCCACGTCGCTCTGGACACC
ATCGTCCTGTACGGGGTGCTGGGGGCGAGGAACGTCGACGAGCGCGCCGG
CTCGCCGTCATCTACCACTGTCGCCGCTGGTTCGTCGGGCTCTCAGGGCC
GTCCGGCGCCGGCGCCGGCGGCGCCCGCTAAGCGGAGTAGATTTTCGAAC
AACCCGGGCTTGAGAGAATGGAGCGGGCTGAGCAAGCGCAGCTCGAGCAG
CAGCCACGGGCACGTCTCGTTCTCGAGCGGGAGTTCCAACCGAAAGACCA
AGGTCAGGGATCTCTCGGAGGACACATCGAGCACGGACAAGTCTCGCCTG
CCAGTGCAGTGGGATTGAGCAACTTCTTGTCGTGATCACGTGGGCGTTCA
GATACGTCCACGTCGCTCTGGACACCATCGTCCTGTACGGGGTGCTGGGG
GCGAGGAACGTCGACGAGCGCGCCGGCTCGCCGTCATCTACCACTGTCGC
CGCTGGTTCGTCGGGCTCTCAGGGCCGTCCGGCGCCGGCGCCGGCGGCGC
CCGCTAAGCGGAGTAGATTTTCGAACAACCCGGGCTTGAGAGAATGGAGC
GGGCTGAGCAAGCGCAGCTCGAGCAGCAGCCACGGGCACGTCTCGTTCTC
GAGCGGGAGTTCCAACCGAAAGACCAAGGTCAGGGATCTCTCGGAGGACA
CATCGAGCACGGACAAGTCTCGCCTGCCAGTGCAGTGGGATTGA
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