mRNA_L-elsbetiae_contig649.15169.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 2.910e-141 Identity = 240/312 (76.92%), Postives = 253/312 (81.09%), Query Frame = 3 Query: 375 AGDLTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGS----------------------SPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAA 1244 AGDL +LL RVAAGDLSPA AAS+L+PLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSA+QI IL AMIRE+R AEA + SP+VATRVSPEKW +IS LPGQL YHADARIVSFG PP AAG G G A S++IG VA+LSAGTSDLA+AEEAAVLAELAGAEVSRFHDVGVAGIHRLL AIPSV+KAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS K A Sbjct: 17 AGDLPALLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREARAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIVSFGEPPQRR--RAAGDGAPGG--SIATSISIGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKVA 324
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.960e-75 Identity = 151/291 (51.89%), Postives = 182/291 (62.54%), Query Frame = 3 Query: 420 LSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGG---------------EEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSF-GAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAA 1244 + PA A +L PLL +G FAKIDH R R GFPEVV+G+GK+ +QI HI+ MIR + +P VA+R+ KWS + + G L Y+ DAR+ + G+ P AGS +G VA++ AGTSD+AIAEE AVL EL GA V R +DVGVAGIHRL AA+P V A A+C+AGMDGAMP VVAGLV+CPVVAVPTSVGYGAA G+APLLTMLNACAPGV+VVNIDNGFGAAA AVK+L+ AA Sbjct: 1 MGPAAAVEQLEPLLT-----IAHIGDFAKIDHHRTIRTGFPEVVYGEGKTPEQIRHIMEVMIRHRKSHSXXXXXXXXXXXXXXXXSSGSVDHAPAVASRICSAKWSHLQH-IDG-LQYYRDARLAVYHGSAPPAAGS-------------------LGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAVKILRMRHAA 265
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A846GFF1_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=24 Tax=Moorena TaxID=1155738 RepID=A0A846GFF1_9CYAN) HSP 1 Score: 226 bits (575), Expect = 1.140e-67 Identity = 143/285 (50.18%), Postives = 184/285 (64.56%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSG 1235 L SLL+ VAAGDLSP VA KL E+VG FAKIDH R R GFPEV++G+GK+ DQI I+ M +++ P+V ATR++PE + + +P +L Y++ ARI + AP L E AG+ ++++SAGTSDL +A+EAAV AEL G +V R DVGVAGIHRLL + +A V I VAGM+GA+P VVAG+ CPV+AVPTSVGYGA+ G+APLLTMLN+CAPG+ VVNIDNGFGAA A K+L++G Sbjct: 7 LKSLLEAVAAGDLSPTVALDKLKDFTY------EEVGDFAKIDHHRTLRTGFPEVIWGEGKTPDQIAQIMAVMRQQN-------------PVVMATRITPEVATELESKVP-ELQYYSTARICAI-APSQL---EPKYAGI---------------ISLISAGTSDLPVAQEAAVTAELCGFQVKRLWDVGVAGIHRLLNNRQVIAEADVLIVVAGMEGALPSVVAGMADCPVIAVPTSVGYGASFGGMAPLLTMLNSCAPGIGVVNIDNGFGAAVLAGKILRTG 252
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: K9VM32_9CYAN (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=13 Tax=Cyanobacteria TaxID=1117 RepID=K9VM32_9CYAN) HSP 1 Score: 222 bits (566), Expect = 3.120e-66 Identity = 143/300 (47.67%), Postives = 180/300 (60.00%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAAXXXXXATRGGDGD 1283 L LL+ VAAGD+SP A KL E VG FAKIDH R R GFPEV++G GK+ DQIV I+ AM +S ++ATR+ PE + + + +P L Y+ ARI + A SP+ + + G V I+SAGT+DLA+AEEAAV AEL G +V R DVGVAGIHRLL+ + A V I VAGM+GA+ VVAGL CPV+AVPTSVGYGA+ G+APLLTMLN+CA GV VVNIDNGFGAA A ++L+S +G +G+ Sbjct: 6 LQKLLESVAAGDISPIAALDKLKHF------DFEQVGDFAKIDHHRTLRTGFPEVIWGPGKTPDQIVEIIEAM------------RGRNSAVMATRIEPEVFEQLQQKIP-DLCYYQKARICAISAN-----------------SPTPQ--HPGTVTIISAGTADLAVAEEAAVTAELCGFQVRRLWDVGVAGIHRLLSNRHVIVGADVLIAVAGMEGALASVVAGLADCPVIAVPTSVGYGASFGGIAPLLTMLNSCAAGVGVVNIDNGFGAAILACQILRSAGKVKRRGEGEKGREGE 267
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: UPI00187FF609 (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=Gloeocapsopsis crepidinum TaxID=693223 RepID=UPI00187FF609) HSP 1 Score: 220 bits (560), Expect = 1.360e-65 Identity = 140/283 (49.47%), Postives = 178/283 (62.90%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232 L SLL+ VAAG+++PA A KL L E VG FA++DH RR R GFPEV++G GK+ DQI I+ AM R G S ++ATR+ PE ++ + +P L Y+A ARI + ++P+ G + ILSAGT+DL +AEEAA+ AEL+G V R DVGVAGIHRLL +E A V I VAGM+GA+P VVAGL CPV+AVPTS+GYGA+ GLAPLLTMLN+CA GV VVNIDNGFGAA A ++L++ Sbjct: 7 LRSLLESVAAGEVNPAEALDKLKHL------NYEPVGDFARVDHHRRLRTGFPEVIWGLGKTPDQIAQIMMAM----RDRG--------SVVMATRIEPEVYAQLQEKVPN-LHYYAMARICA--------------------IAPTIEPQYSGTIGILSAGTADLPVAEEAAMTAELSGFRVQRLWDVGVAGIHRLLNNRHVIESADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAVLAGQILRT 250
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A6H1U2A2_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U2A2_9CYAN) HSP 1 Score: 219 bits (557), Expect = 3.800e-65 Identity = 139/285 (48.77%), Postives = 179/285 (62.81%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSG 1235 L SLL+ VA+G+L P A +L L E VGGFA IDH R R GFPEV++G GK+ DQI I+ M + + P+V ATR++PE + + + G L Y+ +ARI + G P V P+ GK+ ++ AGT+DL +AEEAAV A+L G +V RF D+GVAGIHRLLA ++ VAI VAGM+GA+P VVAGLV CP +AVPTSVGYGA+ +GLAPLLTMLN+CA GV VVNIDNGFGAA A ++L++G Sbjct: 6 LQSLLEAVASGNLPPEKALEELKHLAF------EPVGGFAHIDHHRNLRTGFPEVIWGPGKTPDQIAEIMEVMRQRN-------------PVVMATRIAPEVYDQLQERVKG-LFYYREARICTLGLP---------------AVEPTYP----GKMGVICAGTADLPVAEEAAVTAQLCGFDVCRFWDIGVAGIHRLLAHREAIAACDVAIVVAGMEGALPSVVAGLVSCPTIAVPTSVGYGASFNGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRTG 251
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A352AAW6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AAW6_9CYAN) HSP 1 Score: 219 bits (558), Expect = 4.860e-65 Identity = 140/283 (49.47%), Postives = 178/283 (62.90%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232 L SLL+ VAAG +SP VA KL E VG FAKIDH R R GFPEV++G GK+ DQI I+ AM + ++ATR+ PE ++ + +PG L Y+ A+I + AP ++A A G +A++ AGTSDL +AEEAAV AEL G +V R DVGVAGIHRLL+ + +A VAI VAGM+GA+P VVAGL CPV+AVPTS+GYGA+ GLAPLLTMLN+CAPGV VVNIDNGFGAA A +++++ Sbjct: 7 LQSLLEAVAAGHVSPDVALEKLKNFAF------ESVGDFAKIDHHRTLRTGFPEVIWGLGKTPDQIAQIMEAM------------RLRNPLVMATRIVPEVFTQLQDKVPG-LKYYPTAQICAV-APDAIAPKYA------------------GTIALICAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLSHREMIAEADVAIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAILAGQIIRT 251
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A3C0N4P5_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A3C0N4P5_9CYAN) HSP 1 Score: 219 bits (557), Expect = 4.880e-65 Identity = 139/283 (49.12%), Postives = 179/283 (63.25%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232 L SLL+ VAAG++ PAVA KL L E VG FA+IDH RR R GFPEV++G GK+ DQI I+ M + A PI+ATR+ P+ ++ + +PG + Y+ ARI + P +L E +G+ ++++ AGTSDL +AEEAA+ AEL G +V R DVGVAGIHRLL + +A V I +AGM+GA+P VVAGL CPV+AVPTSVGYGA SGLAPLLTMLN+CA GV VVNIDNGFGAA A ++L++ Sbjct: 7 LQSLLEAVAAGEVKPAVALEKLKHLAY------ETVGDFARIDHHRRLRTGFPEVIWGPGKTPDQIAQIMEVM--------RDAAAPDIVPIMATRIEPDVFAKLQEKVPG-IQYYPTARICAI-TPKTL---EPTYSGI---------------ISLICAGTSDLPVAEEAAITAELCGFQVRRLWDVGVAGIHRLLNNRQVIAEANVLIVIAGMEGALPSVVAGLADCPVIAVPTSVGYGANFSGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRT 255
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: K9XDQ8_9CHRO (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9XDQ8_9CHRO) HSP 1 Score: 218 bits (555), Expect = 1.030e-64 Identity = 142/283 (50.18%), Postives = 177/283 (62.54%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232 L SLL+ VAAG+++P A KL L E VG FA+IDH RR R GFPEV++G GK+ DQI I+ AM R G S ++ATR+ PE ++ + +P L Y+A ARI + + + P G ++ILSAGT+DL +AEEAAV AEL+G V R DVGVAGIHRLL VE A V I VAGM+GA+P VVAGL CPV+AVPTS+GYGA+ GLAPLLTMLN+CA GV VVNIDNGFGAA A ++L++ Sbjct: 14 LRSLLESVAAGEVNPVEAFDKLKHL------NYEPVGDFARIDHHRRLRTGFPEVIWGPGKTPDQIAQIMHAM----RDRG--------SVVMATRIEPEVYAQLQEKVP-DLYYYAMARICA----------------ITTAIEPQCP----GVISILSAGTADLPVAEEAAVTAELSGFRVHRLWDVGVAGIHRLLNNRHVVESADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAVLAGQILRA 257
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A8J6STK9_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=4 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J6STK9_9CYAN) HSP 1 Score: 218 bits (554), Expect = 1.280e-64 Identity = 142/284 (50.00%), Postives = 183/284 (64.44%), Query Frame = 3 Query: 384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232 L +LL+ VA G++SP A KL E V FAKIDH R R GFPEV++G GK+ +QI HI+TAM + + P+V ATR++PE + + +PG L Y ARI + L S AA DG P + + G +++LSAGT+DLA+AEEAAV AEL+G V+R DVGVAGIHRLL+ +++A V I VAGM+GA+P VVAGL CPV+AVPTS+GYGA GLAPLLTMLN+CA G+ VVNIDNGFGAA A ++L++ Sbjct: 7 LQNLLNAVALGEISPENALDKLKHF------DFEPVADFAKIDHHRSLRTGFPEVIWGPGKTPEQIAHIMTAMRQRN-------------PVVMATRITPEVYEKLQPQVPG-LRYFELARICA------LVQSSAA-----DGEMPEVQ--HEGAISLLSAGTADLAVAEEAAVTAELSGFRVNRLWDVGVAGIHRLLSNRQVIQEADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGANFGGLAPLLTMLNSCAAGIGVVNIDNGFGAAILAGQILRT 257 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig649.15169.1 >prot_L-elsbetiae_contig649.15169.1 ID=prot_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp MIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVback to top mRNA from alignment at L-elsbetiae_contig649:22419..23976- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig649.15169.1 ID=mRNA_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1558bp|location=Sequence derived from alignment at L-elsbetiae_contig649:22419..23976- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig649:22419..23976- >mRNA_L-elsbetiae_contig649.15169.1 ID=mRNA_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig649:22419..23976- (Laminarionema elsbetiae ELsaHSoW15)back to top |