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Homology
BLAST of mRNA_L-elsbetiae_contig6488.15166.1 vs. uniprot
Match: A0A6H5L0K3_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K3_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.420e-23 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 280 CCGLCGYTLEEGQRVVRSPSCSEGLLLHHGCFD--DSGVVFSDDADAGRLKFGCDCGQFHSGL 462
CC LCGYTLEEGQRVVRSP C EGL++H CF+ DS VFSDD+D G LKFGCDCGQFH G+
Sbjct: 252 CCCLCGYTLEEGQRVVRSPECGEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGV 314
BLAST of mRNA_L-elsbetiae_contig6488.15166.1 vs. uniprot
Match: D7FN84_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN84_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.290e-22 Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 238 EGADEPVLMGGEGSCCG-LCGYTLEEGQRVVRSPSCSEGLLLHHGCFD--DSGVVFSDDADAGRLKFGCDCGQFHSGL 462
E A P+ G C LCGYT+EEGQRVVRSP C+EGL++H CF+ DS VFSDD+D G LKFGCDCGQFH G+
Sbjct: 19 EQAPAPMSSATGGDCXXXLCGYTIEEGQRVVRSPECAEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGV 96
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 104.8 |
| Seed ortholog evalue | 3.8e-20 |
| Seed eggNOG ortholog | 2880.D7FN84 |
| KEGG ko | ko:K04348,ko:K04460 |
| KEGG Pathway | ko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04728,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04728,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | calcium-dependent protein serine/threonine phosphatase activity |
| EggNOG OGs | COG0639@1,KOG0375@2759 |
| EC | 3.1.3.16 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009 |
| Ec32 ortholog description | calcineurin A |
| Ec32 ortholog | Ec-15_003320.1 |
| Exons | 2 |
| Model size | 463 |
| Cds size | 462 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816715.8155377-CDS-L-elsbetiae_contig6488:2846..2951 | 1622816715.8155377-CDS-L-elsbetiae_contig6488:2846..2951 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6488 2847..2951 - |
| 1691683760.9263215-CDS-L-elsbetiae_contig6488:2846..2951 | 1691683760.9263215-CDS-L-elsbetiae_contig6488:2846..2951 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6488 2847..2951 - |
| 1622816715.8311062-CDS-L-elsbetiae_contig6488:6201..6558 | 1622816715.8311062-CDS-L-elsbetiae_contig6488:6201..6558 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6488 6202..6558 - |
| 1691683760.9416244-CDS-L-elsbetiae_contig6488:6201..6558 | 1691683760.9416244-CDS-L-elsbetiae_contig6488:6201..6558 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6488 6202..6558 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6488.15166.1 >prot_L-elsbetiae_contig6488.15166.1 ID=prot_L-elsbetiae_contig6488.15166.1|Name=mRNA_L-elsbetiae_contig6488.15166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
SGWGGEEGEAGGLRLPLPLPLPMVPAKPATDLYASRSPCGTQASTTSSEG
STAGGATSPLSPAVLHQTGTTTLGNAPSHEGADEPVLMGGEGSCCGLCGY
TLEEGQRVVRSPSCSEGLLLHHGCFDDSGVVFSDDADAGRLKFGCDCGQF
HSGL back to topmRNA from alignment at L-elsbetiae_contig6488:2846..6558- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6488.15166.1 ID=mRNA_L-elsbetiae_contig6488.15166.1|Name=mRNA_L-elsbetiae_contig6488.15166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3713bp|location=Sequence derived from alignment at L-elsbetiae_contig6488:2846..6558- (Laminarionema elsbetiae ELsaHSoW15)
AGCGGGTGGGGAGGAGAAGAGGGAGAGGCTGGTGGCCTACGGCTGCCGCT
GCCGCTGCCGCTGCCGATGGTCCCGGCCAAGCCGGCGACGGATCTCTACG
CCAGCCGGAGCCCCTGCGGCACTCAAGCCAGCACCACAAGCAGCGAGGGC
TCCACCGCAGGCGGCGCAACTTCCCCTTTGTCACCCGCTGTGTTGCATCA
AACGGGCACCACCACGCTGGGCAACGCACCCAGTCATGAAGGCGCAGACG
AACCGGTACTGATGGGGGGAGAGGGGAGCTGCTGCGGGCTCTGCGGGTAC
ACGCTGGAAGAGGGTCAGCGGGTTGTGAGGAGTCCCAGCTGCAGCGAAGG
TCTGCTGGTGAGTTTTTTTTTTGCTAGGTACAAACATGTGTACAAAATGT
GTTTGAATACCCCGTTCTCCGACCTGCTGTCAATCGACAACGCCCTCAAC
ATGTACATGCAGCAAGCAGTCATTGTATGTACGTACATAGCAAATGCATG
TTGCTGTTCTTGTTTTTTTCTTCACATTAAGCTCTTACAATCGAGACTGC
TACCTACATAATCCCAAAAAATCTAGCATAGATATTTATGTACTCTCACG
GCCCTCAATTCCTGAGAAACACACCAAGGCAGGGAGATGTAGACTACGGA
AGGTACACCAGAAAACAATGAACTGAAGAACACACCTGGTTTCCGGCAAG
TACTACTGTTGTACATGCGTTGAACGTTGTACATACCGTATACGACACAA
AAGAGAACACACCCCCCGGACCGATTTTCAAAGCTCAAGCACTCCACAGC
GAGAGGAGTGTAAGTCCCGATAAGGGCGGCGTTGGAAAGATCTCACCCCG
AGAGCTGTCCGAAAACGTGCCGTTGGGTATTGCGATCATACCCGTTGCGG
AGTAACCGAGGTTTGAAATTCGATCCAGGGCGTGTGTTATCTCATGTCAT
ATACGGTACGTCATATGTAGGGAGGTGAACACATACAGTACATACGTGTT
TTTTTTTTTCTTCACATTTATTTCCAGTGCTCGATGGGCTGGCTCCGTCA
CGAGGACATCTTGCCAGAGTACTGAACCGTGGTCACACAGAAGGGTTCCT
TTCCCCAACGCCGGCCCCCACCCCCCCGTCTGCGGTGCTTGCCTAAGGTT
TTTGTCGCGGGAAGGGTTCAGCCGTCTCTTTCCCTCGTCGACGGTGAGGT
CGAAGTTTGTGTACTTGCCAACACCGTACGAAACAAACAAAACAGCCAAA
CAACGAGAAAGCATGCTGCTGCTGTTTCCCATATATGACTGTACGACATT
TATTTGTAGGACAACATTAACATTAACAGCGTAGTGTCTATAGTGGTAAT
AGGCCGATTCTTATCGGACCAAAAAAGCCAGAATCAGATCGAGAAAGGTG
CGTTGGCCCGGGAATCACACTGGTCGCCAATTACGTGAATACCCAGTAGT
CAGCAAGAGAGAGCTGAGCATTACAATGAATACCCAGTTCTCGGCCCCTG
GGGCACCGATCGCAATCGGAGCAGCACTTCAGGTGGTTGAGGTTTTCGAC
CTTACAAAATCCGATCGCATCGCCTGGCCGAAAAGCTCGAATCGGGTTCC
ACTCCGCCACAAAGCTCTCCGCCACACGCAACGCCCGATGCCCCCACACG
ACTGGCGCGTCCAGAGATATCACCATGGAGCACACGCTTGAAGTGCTTTG
ATTGCGATCGGTGCCCCAGGGGCCGAGAACTGGGTGGTGCTCAGCTCCTC
TCTCTTGCGGACTGCTGGGTATGGGTATTCACGTAATACATAGGCCATTT
CTTATATTCAGCCAAAATGTGCAAAATTCAGCAGAAAAACAGAATTAAAA
AAGCTGCTTTGGCCCGGGAATGACATTGAGTGCCAATTACGTTGCTTGTT
TGTGGTATGTACGAAAATCTGCGCCAATGTGTCGTTATTGCTTGTATTGC
CTATTGTAACAGCAGCAGTTAATAACAATGGGTGCAATAAATGGCTTCCA
ATTTCAGCACCATCTCCATCCACCCCACCTTACCGCCACCTTAAGCAAGG
GGGGCAATTGTCCACGTGTGGGACTGACGTGTGGAGTGCAAATATAAACA
ACGTGCACGCCTCCTCGTGTCTGATTGGCCGAAGACCCGCCGCCGCACGG
TTTTTGCAAGAACGCCAACCGAACGCGCGGCGACGAAGCCGCGCGGAGGC
CCTTTCGCACCCGATCACCACCCCAGAGGTCAAGCGTTTTTGGGGTGTTG
CGATTCGGGTTCGGGTTAAGTCTTCTGCATCATCGGTGGGGGGTGTCTCG
ATTGGATTGGATTGGATTGGATTTTTTTTCGTTCAAAAGTTTTTTAAAAT
AAAACAAAGAATCAAAGATGGAACCTAACCCATACTAGAGTAAATAAAGA
CTCGATATGGGGTTCAAACGGTATTCCATACAGAGACGTAATACTTGGCG
AAGCGAGCAGAAAGTTTTTTCTTTTATTTCCCCACATGACACATGATGTG
ACATGAAATGGCACGGATGACATGGATGACATCCGTGTGGCCTTCCTGCC
GAGAAGGGGAGCTACAGTAGGCGCCACCACTTAAGAACCTCTTTTTTTGC
CCGAGGCTCGGTTCTTATTTTCCCGTGAGGCAGCCGATTTATCTTTACAT
AGGTTTTAGAGTGCGGGTTGAGAGCGAGCACGTGTTTCTTATGGGCATGT
TCTTATATTCTTGATATTTTGAGGCTGGAGTTCTTAAGTGCTAGGTTCTT
AAGTGGTGGCGCCTACTGTATAGGCCTGCCTGTAGCAGGGGCCCCAATTC
TGAAACAGTGGCGCCGTGGGGATTTTTTCACTCTGTTTCTTCGATAAATA
CCCCCCCCCCCCCCCCCCCCCCCGCTGCCCCCGCAGCTCTTTTCGAGAAC
GGGAGGCTCTTTGCAGGAAGTCTGCGTAACTCACTCGCACAGCTTGTGTC
TCTTTCCCCCCCCACCCGAACTTCGGCCTTAATCTACCGTCGACGAGGGA
AAGGGACGGCTGAACCCTTTTCTCGCGACAAAAATCTCAGGCAAGCGCCG
CAGAAGGGGGGGAGTGGGGACTGTCAACGGGACTGTCAACGGGACTGTCT
ATATGTTACCGCGACAAAAAGCTTAGGCAAGCACCGCAGAAGGGAGGAGT
GGGGGCCTCGGGGAGAAAAGGAACCCTTCTGTGTGACCACGGTTCGGCAC
TACTCTGGCAAGATGTCGATGTCCTCGTGGCAAGGAAAGAGCGCCATCGA
GAACACTGGAAATAAATGCGAAGAGGAAGCAAATCATATTTTTTTTAAAA
CGCGTTTCGCTCACCGCCTTGTGTGCTGTGTGTGTTGTGTGTCATCACGC
CTTCAAACCCCCAAAATACTGGACGTATGTAGACTGCTGATATTTTGTAT
TTTGTATTTTTTTATTTCTTCTTCACATTTATTTTCAGTGCTCAATGGGC
TCCCCGTCACTAGGACATCTTGCCAGAGTACTGGACCGTGGTCACACAGA
AGGTTTCCTTTCCCCAAGGCCCCCACTCCCCCCCGTCTGCGGTGCTTGCC
TAATATTTTATATATACATTAATTTAAAAAAAATGTGTGTGCTGCCCACG
CTGGCAGCTCCACCACGGCTGCTTCGACGACAGCGGCGTGGTGTTCAGCG
ACGACGCCGATGCCGGGCGACTCAAGTTCGGCTGCGACTGCGGGCAGTTC
CACTCCGGGCTCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6488:2846..6558- >mRNA_L-elsbetiae_contig6488.15166.1 ID=mRNA_L-elsbetiae_contig6488.15166.1|Name=mRNA_L-elsbetiae_contig6488.15166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig6488:2846..6558- (Laminarionema elsbetiae ELsaHSoW15)
AGCGGGTGGGGAGGAGAAGAGGGAGAGGCTGGTGGCCTACGGCTGCCGCT
GCCGCTGCCGCTGCCGATGGTCCCGGCCAAGCCGGCGACGGATCTCTACG
CCAGCCGGAGCCCCTGCGGCACTCAAGCCAGCACCACAAGCAGCGAGGGC
TCCACCGCAGGCGGCGCAACTTCCCCTTTGTCACCCGCTGTGTTGCATCA
AACGGGCACCACCACGCTGGGCAACGCACCCAGTCATGAAGGCGCAGACG
AACCGGTACTGATGGGGGGAGAGGGGAGCTGCTGCGGGCTCTGCGGGTAC
ACGCTGGAAGAGGGTCAGCGGGTTGTGAGGAGTCCCAGCTGCAGCGAAGG
TCTGCTGAGCGGGTGGGGAGGAGAAGAGGGAGAGGCTGGTGGCCTACGGC
TGCCGCTGCCGCTGCCGCTGCCGATGGTCCCGGCCAAGCCGGCGACGGAT
CTCTACGCCAGCCGGAGCCCCTGCGGCACTCAAGCCAGCACCACAAGCAG
CGAGGGCTCCACCGCAGGCGGCGCAACTTCCCCTTTGTCACCCGCTGTGT
TGCATCAAACGGGCACCACCACGCTGGGCAACGCACCCAGTCATGAAGGC
GCAGACGAACCGGTACTGATGGGGGGAGAGGGGAGCTGCTGCGGGCTCTG
CGGGTACACGCTGGAAGAGGGTCAGCGGGTTGTGAGGAGTCCCAGCTGCA
GCGAAGGTCTGCTGCTCCACCACGGCTGCTTCGACGACAGCGGCGTGGTG
TTCAGCGACGACGCCGATGCCGGGCGACTCAAGTTCGGCTGCGACTGCGG
GCAGTTCCACTCCGGGCTCCTCCACCACGGCTGCTTCGACGACAGCGGCG
TGGTGTTCAGCGACGACGCCGATGCCGGGCGACTCAAGTTCGGCTGCGAC
TGCGGGCAGTTCCACTCCGGGCTC back to top
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