mRNA_L-elsbetiae_contig6487.15165.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6487.15165.1
Unique NamemRNA_L-elsbetiae_contig6487.15165.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: D8LRN9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN9_ECTSI)

HSP 1 Score: 630 bits (1624), Expect = 4.390e-217
Identity = 344/470 (73.19%), Postives = 396/470 (84.26%), Query Frame = 1
Query:  163 MARGMRRPSASVAXXXXXXXXXCSSTARAFVVSGPSRGGLRSKATRMLAVGQLQMSSGGPRGRSG-AGASIEGAGGAKVVIASAMPIQSVRTQQRSIGADTDEYGDNAEMVGGA-GAASGLQPEDYQGFSGASASQRTNQMVDPNSREATLSRKNNLLLSGLVLATITAAGWVTGTAFVNRQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGATMLKIRNDNMAETALKAAIEAVPDGQMLESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            MARGM R  A+V           SS A AFV+ GPS+GGLRSKA R  AV  LQM+ GGPRGRSG A   IEGA G++VV+ASAMP+Q +  QQ+S+  D D Y D++EMV GA GAASG+Q EDYQGF+G    +RTNQ+VDPNSREATL+RKN LL  GLV+AT+TA  WVTGTAFVNRQTDLVEAFADEMTYH+GDEKEMELCIKEYKGKLGP +YREAMFK CMLA+G+KKA+TLETVR++KFIFKQFRL+ +KGVKL+V A R TDRSQSNVRSKLLFLGGL+A+GD KA++ALEPL++NV+SSF  DGA MLKI+  +MAE+AL+AAI  VP+G+MLESGWEELGMDDQWAARVAT+M D+D+PA  +DFYKTGG  T DAESDPEAA+ALAA+E DM AKKTEPQDEKEPEAEG+AK+YEC VCGYKMFVAKGREFKFFGD FKCPECGAGKNKF E+ MDDD
Sbjct:    1 MARGMMRRQAAVGVVALALSGGGSS-ASAFVL-GPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPVQGI-PQQQSMSVDGDGY-DDSEMVEGAIGAASGMQQEDYQGFTGGQE-RRTNQVVDPNSREATLTRKNKLLFGGLVVATVTAGVWVTGTAFVNRQTDLVEAFADEMTYHIGDEKEMELCIKEYKGKLGPAMYREAMFKECMLAVGRKKAVTLETVRSIKFIFKQFRLSPLKGVKLVVAATRRTDRSQSNVRSKLLFLGGLVAEGDIKAQEALEPLRQNVQSSFPVDGANMLKIKERDMAESALRAAISDVPEGEMLESGWEELGMDDQWAARVATDMVDNDDPAGGLDFYKTGGPPTGDAESDPEAAKALAAMEEDMAAKKTEPQDEKEPEAEGTAKAYECTVCGYKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDDD 465          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A835Z4L2_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L2_9STRA)

HSP 1 Score: 177 bits (449), Expect = 9.550e-46
Identity = 118/335 (35.22%), Postives = 174/335 (51.94%), Query Frame = 1
Query:  565 RTNQMVDPNSREATLSRKNN-------LLLSGLVLATITAAGWVTGTAFVNRQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGATMLKIRNDNMAETALKAAIEAVPDGQMLESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTE 1548
            +T  +VDP  R     ++N        +  +  VL  +  + +  G ++  RQ  LVE +A EMT  +    EM+ C KEYK KLGP  +R  MF   +  + +KK +T +T+ A  ++ ++F    VK  KLL  A ++  R Q  +RSKLLF G  ++   + A K L+PLK  +  S+R+ GA +++  + ++AE AL+ +  A   G++ E GWE LGM +  A     E   +   A  +   K   AAT       EAA+  A                     EG+A+++EC  CGY ++VAKGRE+KFFGD FKCPECGA K KF E
Sbjct:   14 KTGSLVDPAERIRLQQQRNQPGSARGEIFANLAVLGVLVGSVYFAGKSYFTRQETLVEGYASEMTDVISSSTEMDACHKEYKRKLGPKQFRGEMFAAFITELARKKPITCQTMMAADYVRRKFGFKDVKVAKLLAAAGQAVARKQPGLRSKLLFYGQRLSGSSDAAAKQLQPLKDLLAQSYRSGGAQIVESASISIAEQALRDSAHA--SGELPE-GWELLGMSEAQARETLGEGGGEAMYAKLVKEAKDRDAAT-------EAAKGGAGRGGGS-------------SEEGTARAFECGSCGYTLYVAKGREWKFFGDDFKCPECGASKGKFQE 325          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A1Z5JEC1_FISSO (Rubredoxin-like domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC1_FISSO)

HSP 1 Score: 155 bits (391), Expect = 6.370e-37
Identity = 102/288 (35.42%), Postives = 155/288 (53.82%), Query Frame = 1
Query:  718 AFADEMTYHVGDEKEMELCIKEYKGKLG--PTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTD--GATMLKIRNDNMAETALKAAIEAVPDGQM-LESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            AFA EM YH GD KEMELC+K+Y  KL   PT  ++AM K  + A  +KK ++ + + ++ ++F  F+LN  K  + LV   +     + +   KLLFLG  I K  E  + AL P+K+ ++S++R      T+++     +AE A +A ++A    Q  L  GW+ LG+D + A ++  E A +   +     Y   G  T   +          + E   +AKK     E+E   +  +  YEC  CGY +F+A+GRE KFFG+GF+CPECGA K+KF   D  +D
Sbjct:  163 AFAKEMLYHDGDFKEMELCVKDYNKKLLWLPTR-KDAMLKTYLEAYAKKKTVSPQAIASISYVFTLFQLNEAKAAETLVALCKKMGTEKISSAGKLLFLGSRILKSPE-GKNALTPIKELIKSTYRDAQVAETLVETSQHAIAEAAYRATVQAAGKNQKSLTKGWQALGLDKEKATQIFEEEAKEGFISARETMY---GGQTQKYDKKGNRLNPDGSYENPEDAKKA----EEESSEDTVSNVYECGECGYTLFIAQGRETKFFGEGFRCPECGASKDKFNARDDVED 441          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A7S3DRF8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRF8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.170e-34
Identity = 111/330 (33.64%), Postives = 166/330 (50.30%), Query Frame = 1
Query:  628 LLSGLVLATIT--AAG-WV---TGTAFVNRQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKL---GPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGA--TMLKIRNDNMAETALKAAIEAVPDGQM-LESGWEELGMDDQWAARVATEMADDDNPALPIDFY--------KTGGAATNDAE-SDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1554
            ++S L++ +I   AAG W      +  V     +++AFA EM YH GD  EM+LC  +Y  KL   GPT   E M K  +    +KK ++ +++  + ++F   +L+  K   +LV   R    ++ +   KLLFLG  I K  +   KALEP+K  +++++R +    T++      +AE + +AA++A    Q  L  GWE LG+D   A R+  E A++   +     Y        K G     D   +DPE A+A A               E+  E E  +  YEC  CGY +F+A+GRE KFFG  FKCPECGA K+KF   D
Sbjct:  183 IISTLIIPSIALFAAGRWAFNRVSSRVVENTDSILDAFAREMIYHDGDFDEMKLCYNDYSRKLLILGPTR-TETMLKMYLEVYAKKKTVSPQSIVTLSYVFTLAKLSEEKAADVLVKLCRQMGPNKISSAGKLLFLGSRILKSPD-GRKALEPIKDMIKATYRDEAVAETLVDTSQQAIAEASYRAAVQAAGKSQTALSLGWETLGLDRDTAQRIFDEEAEEGFVSARETMYGGQSTKYDKKGRIIAKDGSLADPEEAKAAA---------------EEAEEEEAISNVYECGECGYTLFIAEGRESKFFGTDFKCPECGASKDKFEARD 495          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A1E7FDG3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDG3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.410e-34
Identity = 108/326 (33.13%), Postives = 170/326 (52.15%), Query Frame = 1
Query:  628 LLSGLVLATITA-AGWVTGTAFVN-----RQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKL---GPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTD--GATMLKIRNDNMAETALKAAI-EAVPDGQMLESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATN-DAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            ++S L++ TI A AG   G   V+     + T  +++FA EM YH GD +EM+LC K+Y  KL   GP      M K  +    ++K ++ +++  + ++F  F+L+  K  +LLV   +     + +   KLLF G  I K  E  + AL P++  ++ S+R      TM++     MAE A + ++ E   D + L  GWE LG+D   A R+  E  DD         Y  GG +T  DA+ +         ++ D + K  +     + EA+ ++    CQ CG+ +F+AKGRE KFFG+GF CPECGA K++F   D+D+D
Sbjct:  142 IISTLIVPTIFAGAGLKWGLTKVSGKVSDKVTIALDSFAKEMVYHDGDFEEMKLCYKDYSKKLVLLGPKK-NSIMIKSYLKLYSKQKLVSPKSISTLSYVFSIFKLSEEKAAQLLVSLCKEMGNERMSSAGKLLFFGSRILKSPE-GKAALTPIRDMIKGSYREIEVAETMVETSQQAMAEAAFRTSVLEGGKDQKNLTMGWEVLGLDKDTAVRIFIEEEDDGFITAREKMY--GGQSTKYDAKGN--------IIDKDGKLKDPDNAIGDDEEAQPTSNVMGCQDCGFTLFIAKGREAKFFGEGFVCPECGAAKDRFDPVDIDED 455          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: B7GE71_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE71_PHATC)

HSP 1 Score: 136 bits (343), Expect = 2.320e-30
Identity = 100/298 (33.56%), Postives = 152/298 (51.01%), Query Frame = 1
Query:  697 RQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLY----REAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFR--TDGATMLKIRNDNMAETALKAAIEAVPDGQM-LESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKF-TEADMDDD 1566
            R   L+++FA EM YH GD  EM+LCI++Y  KL   +Y    R+ M K  + A  +KK ++   + ++ F+  QF+++      LLV   R     +     KLLFLG  I K  E  + AL P+K  ++S++R  +    M++     +AE + ++ + A    Q  L  GW+ LG++   A R+  E A +         Y   G  T   +      +    L+   +A +    D+ EP+  G +  YEC  CGY +FVA+GRE KFFG GFKCPECGA K +F    DMD++
Sbjct:  200 RTEALLDSFAKEMLYHDGDYNEMKLCIQDYNQKL---IYLPNRRDVMLKRYLAAYAKKKTVSPLAISSLSFVLTQFQMSEEAAAALLVSLCRQMGTDKIASAGKLLFLGSCILKSPE-GQAALTPIKDLIKSTYREVSVAEAMVETSQQAIAEASYRSVVLAAGKQQKSLTPGWDVLGLERDVAQRIYDEEAKEGFRTERETMY---GGQTTRYDKKGRIVDRAGKLKNPADADED---DDDEPQG-GVSNVYECGECGYTLFVAQGRESKFFGTGFKCPECGAAKKQFKARDDMDEE 486          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A7S1BUB6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUB6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 7.770e-29
Identity = 96/303 (31.68%), Postives = 148/303 (48.84%), Query Frame = 1
Query:  691 VNRQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGATMLKIRNDNMAETALKAAIEAV-PDGQMLESGWEELGMDDQWAARVATEMADDD----------NPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            V +Q + +  FA EM YH G+E+E+ LC+KEYK KL P   R  M    +    + K ++L T+  +  +F   +L+ V   K LV AA    +S+ + RSK LF G  I K  E  + AL+PL+  + S++R  GA ++++  + MAE A K+ + A  PD      G+  LG+    A  +  E+A ++                                 +  + +  +  +  A+  E   EK+  AE S   YEC+ CGY +F + GR+FKFF D F CPEC A K+KF +   + D
Sbjct:   58 VLKQNEAIRDFAVEMAYHDGNERELVLCLKEYKKKL-PRGRRNDMIDNYLAEYFKVKTVSLNTITNLASVFTLLKLDEVSAAKRLV-AAGELLKSKPSSRSKCLFFGDRILKSPEALD-ALKPLRDMLASNYRRGGAEIVRVSQETMAEAAYKSIVAAAGPDQTSATPGYNILGISKDRAQEIFDEVASENFETTLQXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVDVMKQVLEENSAEDLEKSKEKKAPAELSI--YECETCGYTLFPSSGRDFKFFPDDFVCPECQAPKDKFVQKKQNID 355          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A7S2K0X4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0X4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.170e-28
Identity = 91/286 (31.82%), Postives = 140/286 (48.95%), Query Frame = 1
Query:  700 QTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGATMLKIRNDNMAETALKAAIEAVPDGQM-LESGWEELGMDDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1554
            Q D + ++A+EM YH GD +EM++C  EY+ KLG    R  M    +    +KK ++ + + ++ ++F  + L+     K++V AA +   +Q   RSKLLF G  I K  E   + L+P++  + S++R+ G  ++      + + A K A+ A  D Q  L  GWE LG+    A  V   +  D       D  K  G    + +              D + K  + +DE           +EC  CGY +F AKGREFKFF D FKCPECG+ K++F   D
Sbjct:  158 QADTLASYANEMIYHDGDFEEMKMCQNEYRRKLGIGPKRRKMLTSYLEQYAKKKVVSPQAISSLSYVFSLYNLSEKDAAKVIVKAAENLS-TQPASRSKLLFFGEHILKSPEGLTE-LQPIRDMLASAYRSGGPAIVANAQKTIGQAAYKNAVIAAGDEQTSLTVGWELLGLTKDEAETVYEAVKSD---GFQSDAKKLYGGPKQEFDEK--------GRRIDTKGKLMDKEDEDSASDGPKGSIFECGNCGYTLFPAKGREFKFFPDDFKCPECGSPKDQFIGRD 430          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A7S1ZY35_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZY35_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.940e-28
Identity = 101/308 (32.79%), Postives = 157/308 (50.97%), Query Frame = 1
Query:  691 VNRQTD-LVEAFADEMTYHVGDEKEMELCIKEYKGKL---GPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTD--GATMLKIRNDNMAETALKAAIEAVPDGQM-LESGWEELGMDDQWAARVATEMADDDNPALPIDFY--------KTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSY-ECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            V+ ++D L++++A EM YH G+  EM+ C  +YK KL   GP    +AM K  +    +KK ++ + + ++ ++F  ++L+  K  K LV    S     ++   KLLF+G  + K +E A+KAL+P+K  + SS+R D  G +++ +    M E A +  + A    Q  L  GWE LG+  + A  +  E   D   +     Y        + G A   D +  P+  E  AA E        E +D  E  +EG      EC  CGY + +A GRE KFFG GFKCP CGA K++F+  ++ DD
Sbjct:   58 VDEKSDFLLDSYAAEMVYHDGNFDEMKACHSDYKTKLAYLGPVR-NDAMIKRFLELYAKKKIVSPQAISSMSYVFSIYKLSEEKAAKTLVDVCLSMPEKIASA-GKLLFIGSRMLKTNE-AKKALDPIKTMLSSSYRDDVSGPSIVDMAQQAMGEAAYRETVNAAGKRQSSLTPGWEILGLTKEVATTIFEEAKKDKFVSSREAHYGSQSTRYDEKGRALGKDGK--PQNPEERAAAE-------KEERDAIENGSEGGGDMVKECSQCGYTIAIAAGRESKFFGPGFKCPNCGADKDQFSTPEIPDD 353          
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Match: A0A7S1BST3_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BST3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.790e-28
Identity = 96/303 (31.68%), Postives = 148/303 (48.84%), Query Frame = 1
Query:  691 VNRQTDLVEAFADEMTYHVGDEKEMELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQFRLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPLKKNVESSFRTDGATMLKIRNDNMAETALKAAIEAV-PDGQMLESGWEELGMDDQWAARVATEMADDD----------NPALPIDFYKTGGAATNDAESDPEAAEALAALEADMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1566
            V +Q + +  FA EM YH G+E+E+ LC+KEYK KL P   R  M    +    + K ++L T+  +  +F   +L+ V   K LV AA    +S+ + RSK LF G  I K  E  + AL+PL+  + S++R  GA ++++  + MAE A K+ + A  PD      G+  LG+    A  +  E+A ++                                 +  + +  +  +  A+  E   EK+  AE S   YEC+ CGY +F + GR+FKFF D F CPEC A K+KF +   + D
Sbjct:  194 VLKQNEAIRDFAVEMAYHDGNERELVLCLKEYKKKL-PRGRRNDMIDNYLAEYFKVKTVSLNTITNLASVFTLLKLDEVSAAKRLV-AAGELLKSKPSSRSKCLFFGDRILKSPEALD-ALKPLRDMLASNYRRGGAEIVRVSQETMAEAAYKSIVAAAGPDQTSATPGYNILGISKDRAQEIFDEVASENFETTLQXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVDVMKQVLEENSAEDLEKSKEKKAPAELSI--YECETCGYTLFPSSGRDFKFFPDDFVCPECQAPKDKFVQKKQNID 491          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6487.15165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN9_ECTSI4.390e-21773.19Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A835Z4L2_9STRA9.550e-4635.22Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A1Z5JEC1_FISSO6.370e-3735.42Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S3DRF8_9STRA1.170e-3433.64Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1E7FDG3_9STRA3.410e-3433.13Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
B7GE71_PHATC2.320e-3033.56Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1BUB6_9STRA7.770e-2931.68Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2K0X4_9STRA1.170e-2831.82Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S1ZY35_9STRA4.940e-2832.79Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1BST3_9STRA6.790e-2831.68Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6487contigL-elsbetiae_contig6487:1258..9100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score642.9
Seed ortholog evalue1.2e-181
Seed eggNOG ortholog2880.D8LRN9
Hectar predicted targeting categorysignal peptide
EggNOG OGs2E1U7@1,2S947@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRubredoxin-type fold
Ec32 orthologEc-12_000500.1
Exons10
Model size2573
Cds size1413
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6487.15165.1prot_L-elsbetiae_contig6487.15165.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6487 1420..8102 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816715.651894-UTR-L-elsbetiae_contig6487:1257..14191622816715.651894-UTR-L-elsbetiae_contig6487:1257..1419Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6487 1258..1419 +
1691683760.8114574-UTR-L-elsbetiae_contig6487:1257..14191691683760.8114574-UTR-L-elsbetiae_contig6487:1257..1419Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6487 1258..1419 +
1622816715.7772639-UTR-L-elsbetiae_contig6487:8102..91001622816715.7772639-UTR-L-elsbetiae_contig6487:8102..9100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6487 8103..9100 +
1691683760.9106023-UTR-L-elsbetiae_contig6487:8102..91001691683760.9106023-UTR-L-elsbetiae_contig6487:8102..9100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6487 8103..9100 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816715.6656973-CDS-L-elsbetiae_contig6487:1419..15481622816715.6656973-CDS-L-elsbetiae_contig6487:1419..1548Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 1420..1548 +
1691683760.8208866-CDS-L-elsbetiae_contig6487:1419..15481691683760.8208866-CDS-L-elsbetiae_contig6487:1419..1548Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 1420..1548 +
1622816715.676138-CDS-L-elsbetiae_contig6487:2691..28811622816715.676138-CDS-L-elsbetiae_contig6487:2691..2881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 2692..2881 +
1691683760.8285685-CDS-L-elsbetiae_contig6487:2691..28811691683760.8285685-CDS-L-elsbetiae_contig6487:2691..2881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 2692..2881 +
1622816715.6896303-CDS-L-elsbetiae_contig6487:3721..39011622816715.6896303-CDS-L-elsbetiae_contig6487:3721..3901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 3722..3901 +
1691683760.8367732-CDS-L-elsbetiae_contig6487:3721..39011691683760.8367732-CDS-L-elsbetiae_contig6487:3721..3901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 3722..3901 +
1622816715.6993368-CDS-L-elsbetiae_contig6487:4566..47361622816715.6993368-CDS-L-elsbetiae_contig6487:4566..4736Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 4567..4736 +
1691683760.8448374-CDS-L-elsbetiae_contig6487:4566..47361691683760.8448374-CDS-L-elsbetiae_contig6487:4566..4736Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 4567..4736 +
1622816715.711212-CDS-L-elsbetiae_contig6487:4999..50981622816715.711212-CDS-L-elsbetiae_contig6487:4999..5098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5000..5098 +
1691683760.852471-CDS-L-elsbetiae_contig6487:4999..50981691683760.852471-CDS-L-elsbetiae_contig6487:4999..5098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5000..5098 +
1622816715.7217226-CDS-L-elsbetiae_contig6487:5543..56691622816715.7217226-CDS-L-elsbetiae_contig6487:5543..5669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5544..5669 +
1691683760.860416-CDS-L-elsbetiae_contig6487:5543..56691691683760.860416-CDS-L-elsbetiae_contig6487:5543..5669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5544..5669 +
1622816715.733559-CDS-L-elsbetiae_contig6487:5947..60471622816715.733559-CDS-L-elsbetiae_contig6487:5947..6047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5948..6047 +
1691683760.868783-CDS-L-elsbetiae_contig6487:5947..60471691683760.868783-CDS-L-elsbetiae_contig6487:5947..6047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 5948..6047 +
1622816715.74396-CDS-L-elsbetiae_contig6487:6582..67161622816715.74396-CDS-L-elsbetiae_contig6487:6582..6716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 6583..6716 +
1691683760.8772354-CDS-L-elsbetiae_contig6487:6582..67161691683760.8772354-CDS-L-elsbetiae_contig6487:6582..6716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 6583..6716 +
1622816715.7542243-CDS-L-elsbetiae_contig6487:7321..74821622816715.7542243-CDS-L-elsbetiae_contig6487:7321..7482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 7322..7482 +
1691683760.8850353-CDS-L-elsbetiae_contig6487:7321..74821691683760.8850353-CDS-L-elsbetiae_contig6487:7321..7482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 7322..7482 +
1622816715.7652476-CDS-L-elsbetiae_contig6487:7978..81021622816715.7652476-CDS-L-elsbetiae_contig6487:7978..8102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 7979..8102 +
1691683760.900434-CDS-L-elsbetiae_contig6487:7978..81021691683760.900434-CDS-L-elsbetiae_contig6487:7978..8102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6487 7979..8102 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6487.15165.1

>prot_L-elsbetiae_contig6487.15165.1 ID=prot_L-elsbetiae_contig6487.15165.1|Name=mRNA_L-elsbetiae_contig6487.15165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=471bp
MARGMRRPSASVAVAAAALALSCSSTARAFVVSGPSRGGLRSKATRMLAV
GQLQMSSGGPRGRSGAGASIEGAGGAKVVIASAMPIQSVRTQQRSIGADT
DEYGDNAEMVGGAGAASGLQPEDYQGFSGASASQRTNQMVDPNSREATLS
RKNNLLLSGLVLATITAAGWVTGTAFVNRQTDLVEAFADEMTYHVGDEKE
MELCIKEYKGKLGPTLYREAMFKGCMLAIGQKKAMTLETVRAVKFIFKQF
RLNAVKGVKLLVVAARSTDRSQSNVRSKLLFLGGLIAKGDEKAEKALEPL
KKNVESSFRTDGATMLKIRNDNMAETALKAAIEAVPDGQMLESGWEELGM
DDQWAARVATEMADDDNPALPIDFYKTGGAATNDAESDPEAAEALAALEA
DMEAKKTEPQDEKEPEAEGSAKSYECQVCGYKMFVAKGREFKFFGDGFKC
PECGAGKNKFTEADMDDDLL*
back to top

mRNA from alignment at L-elsbetiae_contig6487:1258..9100+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6487.15165.1 ID=mRNA_L-elsbetiae_contig6487.15165.1|Name=mRNA_L-elsbetiae_contig6487.15165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7843bp|location=Sequence derived from alignment at L-elsbetiae_contig6487:1258..9100+ (Laminarionema elsbetiae ELsaHSoW15)
ACAACGCACCTGCTGCACAGCTTGGCTAGCCCAGCATCGCGTTGTTTTCT TTCTTCAACGTTCATAAGATTTAGTGGCAAAGCGGAGGCGTTGGAGGTAG AGGAGGAGCGGAAGCGTTGAGGAGCTGTGGAAAGCCGTGAGCCGCACACA CGTGTAAAAAAAATGGCGAGGGGGATGCGGCGACCGTCGGCCTCTGTTGC TGTTGCTGCGGCGGCTCTGGCGCTCTCCTGCAGCAGCACAGCGAGAGCCT TCGTCGTTTCAGGTCCTTCAAGAGGAGGGCTTCGGTCAAAGGTGCGTGTC TTGGAGTTGTGGAGGTAGGCAGGTAACCAGCCGCGTGTGCGAACGTTAGT CTCTCGTTGAACTCAACGGCCAAGGATCATGAATGATGCCGTCCGCGTTT TTTGTCGATGGCACTGGCCAGCAAGCTCAGGTGTGAAGTGTTTCTGAAGA TGGGTACGTTACACTGCCGACTTATCCCTTGGCTTCGTTGAACAGAGCGC ACGCGATGCACATGTGTATGTAGGAGGCTGGCAGGAAGCCTGCATACACA TGTAGTAACGATGTGTATGATCCACTCGCTGCCCCCTCTCGTTGGCTTGG GTAGTCTATGTAGCGTATTTATCGAAGCGTAGGTGTGATTACACCGCAGC AGGCATGGTTTGCAAAACCACGCGATGCAACTGCTGCACCAGTGTTCTAT TAATAGGTACAAGTAGCTGGGAGTCCCTTTTTACTTCTTGACAACACAAG CAAATCGTCCGAGGTCGTGTTCTAACAGCATTTGGGCAGTTAAGGGTGCT TCGCACGGCCATTACAGGGAGTACATGGGCGCTTGCTAACTTGGCCAGCC TCACAGCCGACCACCAGGATAGCAGCATCTTTGTTTCTCTTCCATTGCGT CGGGCCCAGTTGTGTGTGATACAACCGGAGGCATGCATCTACATAAGTAA GTGTCCTTCCTGTTTAGTCTTGGAAAGATAAAACAGATATGTAATCAAAA ATGGACCCACATTGAGACGGGACTCTTGTGAGATTCAGACGGTATTCCAT ATAGTGACGTAATATCAATATTGGGCCCGCCGAGTAGAAAAAAACCTGAA ATTAAAAGAATTTTTCACCATCTCCCCTGCATCTCTGCCTGGTCAGACAA CATGTAATCCGTCTTGGTTTTGTAGAAATATTTGAGAAGCATACCGAGAC GCTTGTCGCGCCCACACCTCTGGCAGACACATCGCACAACAAACGTCCAG CCGCGCCGACACCCAAGCGCAAATAGCCGAACACGGTAGGCCTTGCCAGC GGCATCGTGCATTGTGCGTATTTATGCATAGTCGACACAGCAAGAGTACC CGGGTCCAAATGTGATGCGTACATATATTTATCTCATTCGTTACATTACT CAACCCCCCACGTCAACCCACGTCAACACACCAGGCAACGAGAATGCTAG CCGTGGGCCAGCTGCAGATGAGCAGCGGCGGCCCACGAGGGCGATCTGGT GCGGGCGCAAGCATTGAGGGGGCGGGCGGCGCGAAGGTAGTAATCGCCTC GGCGATGCCTATTCAAAGCGTGAGGACGCAGCAGCGGTCCATCGGTGCGG ACACCGACGAGTACGGGGACAACGGTACGCCGCGGTGGTGGTGTAGCTGT GCGTTGTATCTACGCAGCATACATAGCATACGTTGTGTTGTCGCCGTTGT CGCCCGGTAAACCTGTTACTACTGTAGCCGCTGTCTCCTACTTGTACCGT CCCTCATCTGGTTTGTTGGTGCGTGCTTATGTTTGTGTTGCTGCTGCCGC TCCCAGACGCGCGGCGTCGTGCACCTACATACGTTGTAGAAAGTATTGGG GTTGGTTTTGTGCTGTACACTTTGGTGCTTGTTACTGTTCCAGACAGAAG ACGGAAGACGGATGTGGCGGGTCCTGTTCTCGGTTTGATGGTCATTTTAC TTTACGTATGGCGGTCTGTCTGGTGATGCTTCTTTACTCCATGCCACATG TGCCGCCCCCCACAGCCCACGCCCTCAACAAGACAGAACGCATCTTGCGG CTTTGTTTTTGTTTGGACGGATGGTTGACCCGGACTGCGATGTAAGTATA AACTTGCCGAACACATTTGCTGAATACATTCAACAAGAGCATCAATCGAC CGTGTCAAGGATAGTCTGCTGTGCATACGATGTACCGGTACCTTACATTC AACGAAGACAGTGCTCGACTTTTTACCTAACCGCGTGCGCCATCCACCTT GCTGGCGTCGCCCCCCCCCCCCCCCCCCCCCCACACCACCCACCCCCCCC CCCCCCCCCGCTGCCGTCCCGGGGCGCAGTGGTGCGGGGCGGGGCGGGNN NNNNNNNNTTTTTCCCCCACCGCGTGCGCCACCCACCTTGCTGGCGTCGC CCCCCCCCCCCCACACACACACAACGACCACTTCACCCCCCCCCATTGAT GCATTGGCTGGGAGCAGAGATGGTGGGAGGGGCAGGAGCTGCGTCGGGGC TGCAACCTGAGGATTACCAGGGCTTCAGCGGGGCATCGGCATCGCAGAGG ACCAACCAGATGGTCGACCCCAACAGCCGAGAGGCCACTTTGAGCCGGAA GAACAATCTTCTCCTTTCGGGCCTGGTGTTGGCTACCATCACAGGTATTG TTGTTGTTGTTGTGGTTGTTGTGGTTGTCTTCACATTAAAAACCATCACG ATCTCTCTATCCAGCACCACCTCCATGAGTCCGGACAAGCCCAACACTGA CGCGGTCGATTCCCGTGGTCACAGGATAGCCTACCCTAACAGGGTATGGT GCATTGTATTGTGTAGGTGTCTATCATGCACTCATCCCTCTAGAGGTGTG AGTGTCTGGCATTTGCAATATTTCATGATACCATACAACGGACAATCAAG CAGGAAGAGAGAGCGAGGTACTACTGTACGCACCGTATGTACAAAAGGTG AAGCGGAAGCGAGACAAAGACAACGCCCTCAGGTCTTGTACATTTGCGTT GCATTGCATTAACGGAAATATTTAGCCTGTGGCTCGACAAACGACCCAGG AAAACATGAAAAGCAGGTACATATTTCTTGGAGACACTTGTCTTACATTT ACAGAGCAAGAAAAACAACAATTCGAGCCAGATGTATCTACGTAGATCAG GGGTAGTGTTAATGCCACTCAGTGTCTGTTCTCTCCCCAAAATAAAGGAG GACCCATCTCAGCCCACCCCCGCCGCTCATCTCCTCGTCGCCCCGTTCTG CGTTATTCTCGTTGGTGTCTTGTCTGTTTCTTGTCTCTGTTGTGTCTGCC TCACTTCAGCGGCGGGGTGGGTAACGGGTACGGCGTTCGTCAATAGGCAG ACAGACCTGGTCGAGGCTTTCGCTGATGAGATGACGTACCACGTCGGCGA CGAAAAGGAGATGGAGCTCTGCATCAAGGAGTACAAGGGGAAGCTCGGTC CCACGCTGTACCGAGAGGCCATGTTCAAGGTGATGGATGAATGGCTCTTT GTGCTGCAAAGTGCATACACTGCTTTTGTTGCGCATGTATATATGAAGAT ACTTGGGCGGGTGTGGTGGACGCTCGCACGCGGGCACGCGCCATGGGTGG CTGACCCCGTGGCTACCAAACCCAGCGCCCTTTTTTGCACGTACGCATTG CACATTTGGGGGCGTGTACCCTCTGTGTGTGTTAGGCGTCTTTGTAAAAA AGGCCACGACGTTGTTGCCGCGGCATGTACCTGGTGTTGCAGGGGTGCAT GCTTGCCATCGGACAGAAGAAGGCGATGACGCTGGAGACCGTGAGGGCGG TCAAGTTCATCTTCAAGCAATTCCGCCTTAACGCGGTGAAGGTGAGAGAA GGAGAGAGAGGCCGAAAGCACAAGGCCTTGTTGTGCAATCAGACAGTCAG GCAGCGGGAGGCCTGTAAACTGGGAGAGAGGTAGGTGGGCACGGGGGAGG GGGGTGGAAAGGGGGCATGCGTGCACAACACACATGATGCGATTGTGCAG ATGTTACGTGGCAGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTGTTA GCACCTCCTATGTGTCATACTCGCATAGAGTGTTGTCCGAATACTTGTAG ATCTATTTGAAAACAGCAGTGAAAGCCGTGTCGATTTGGTGTCACATCAC ATCCCTCCCCTTTCGCTCCAATTCCCGAATAGGGCTCATTGAATATTTGT GGCAGGTCAGCAGTGTGAAAGTTGCACAAATTGACGAACCACTCCTCTCA TCTTACGGCCCTAACGTGTTGCATGCATTCGAACAGGGGGTGAAACTCTT GGTTGTGGCGGCGCGGAGCACGGATAGGTCACAGTCGAACGTGCGCTCCA AACTGCTCTTCCTCGGGGGGCTGATCGCTAAGGGAGATGAAAAGGCTGAA AAGGCTTTGGAGGTGACAAGGAGGGTCGAGAGTCGAGAGAGAGAGATAGA GAGAGAGAGAGAGACAGAGAGAGAGAGGGCAGGCTGAAAGGAACACATAT CATCCGTGTCTTTTTTTCAAGATGTTCGTTGTTGGCGTGTTGGAATTGTT CGGTGTCGGTTTTTTCTTTTCGTCTTCTCCATCTGAATAAACTCGAAACC TTGCGTGCTCGCTTGTTCGTGTTCCGCCGCCGCTGCGATCATGATGCCGT CGATGCGATGGATGCGATGAATGCAATGGCATGCCTGCAGCCGTTGAAAA AAAACGTCGAGTCATCTTTCCGTACTGACGGAGCTACGATGCTGAAGATC AGGAACGACAACATGGCCGAGACAGCGTTGAAGGCTGCGAGTGAGTGAGA GTGAGAGTTAAGAGAGAGGGAGGGCGGGCTAACGAAGAAGTGTGGATTCC TAGGCTCGTTGTTGGTGTTGCTGTTGTTGCGTGCACAGGGTAACTGACCA GAGCCGGAGCCGGCGCGTACCTTATGTTACCCTAAAATAGCATGCTGCAC TTCGTCCTAAAAAACACAGGCTCAGCATCCATGAAGTACAGCAGTAGGAG ACTAATCCATTGTTTATTATTTATTTTTTACTGTAGGCTATGGTTGTTCT GATCCATGCCATCTCCGTGTTGAATGGTACCGACTGTACCATGAAAGCCG AGTCTCTGTCCCCTTTGCTTGCCTTTCTTGCACGAATATGTGGGCGTCAC GATTATGACGCCAGTACGTCATAGTATCAACAATGGTACCTTTTTTCTGT TCCGATCTCTCGATTGCTTGGTCCTCGGCGCCAGCCTATCTTTTATGTTA CCCTGCCCCTCAACTCCGAGACATTTGTGTTGTGTGCGCGTGCGTGTGCG TAAAATGGATAAATGACCTGAGCAGTCGAGGCTGTACCGGACGGTCAAAT GCTGGAGTCAGGCTGGGAAGAGCTGGGAATGGACGACCAGTGGGCGGCGA GGGTGGCAACCGAAATGGCCGATGATGACAACCCGGCATTGCCCATCGAC TTTTACAAGGTGCGTTGCGGGTCGTGCGTGTGCGGTTTGAATTACGGCAG CGATCCGTGTGTTGGTCGTTGTCCTGCAGGAAACATGATGTATCGTTGCG TTCTAGTTGTTTATTGGTTTTGGACTTTGGCAAAGAAAGACGCGTGCAAA CTGGAAATGTGAAATATACATGTCATCATTTGTAGGATGGGGATGAGGGT GCTGCTGGCTGAGACGTACCTTACACTCTTATTTTGGTATGACTTGAGCT GCTTCACAGCTATTGCAGCTGAAAAGTGACGGCATAACTCCGTGGGCTGC AGATAAGGGGTGTCCCGTGATACGGTGATGTGCCCGATCCATGAAAGTCT TTATTTGATATCCTGCCTACATGCCGCCACACATTAACGCATGTCGTGTA CGAGCGAAATTATTTCATATCTCCGTTGACACGAGCATAAAAGAGACGTT GACACGGGCGGCGGAACGGCATGAATGAGTAAAAAAACCAAAACGACGGC AACGAGCGCGATACTTGAGGGATGGATTGACACGGACACGAACACCGTGT GATGCCATGACGATCGCGAAGATAAAAGTTAACCGGATCGCGCTACTAAA ATTATGATTATCAGACGGGAGGGGCGGCGACCAACGATGCCGAATCGGAC CCGGAAGCGGCCGAGGCTCTTGCTGCCCTCGAGGCGGACATGGAGGCCAA GAAGACGGAGCCACAGGACGAGAAGGAGCCAGAGGCGGAGGGGTCAGCCA AATCTTACGAGTGCCAAGTCTGCGGGTGCGTTGAAATTGCAGATGTTTTT TTTTCGTGAAAATACAGACCTCTCCCTGCATTCCTTGCGTGTCTTTTTTA ATTTACTTTTACCGCCTGCTATCAATTGGGTGCGTTTTGCATGTTTATAA GGTCGAACACATCATGGAATGCGCGCCTATTGTTCCGTGCATTGGATAGC CCGATCAAGACGACCAATCGTACCACGCGTTGATTATGTTGTGCAAAGTC TCCACAATCCGCTCAAACGCAGACTTGGTTTTCGATTTTCTCTGCCCCCC TATTCTCCCCCCCCCCCCCGGCCCCCTATGCTCTTAAAACAAAAACGGGT ATGTGCGGCGAAAAAGCGGGTGAGCCGAGGGCCNNNNNNNNNNTGGTTAT GTTGGGGAAAGAGTCCACAGGCCCCGTAAAGGCAGACGGGGGTGTCGATT TTGGCGGCCCCCCAGAGCACCCCCCCCCCCCCCGGCATGTGGTTTGATCA CGTCATATGGTGTCATGTCAGGTACAAGATGTTCGTAGCCAAGGGCCGAG AGTTTAAGTTCTTCGGAGATGGCTTCAAGTGCCCGGAGTGCGGAGCGGGG AAGAACAAGTTCACAGAGGCGGACATGGACGACGATTTACTTTAGACTTG GGGCTTGAGTCCACAAGTTTTGTCTTATTCGTCACATGCGTCGCCATGGG CCAGTTAGTTCCCCCATTCAGTCCAATTAGATCGAGTTCGGATATATGTA GATTTAATCTGGTCTTGTTTGGTTTTAGCAGGTTGATCGTGGGTGTTGTT GCTAGATGTTAGATTTTGTCTGACCGCTTTCGATTCACATTTCCCAATTT TCAAGTCTGCCTCCCGAGGTGACCTGGCGGATGGGTTGTTGCGTTCGCTG TGAAGATAAACAGTCCTTCCGGTGCACCGACCAGGTCTGCTAGATCTGTT ATTGGCACACTTGACTAATTTTGCTGTTTGTTGGTGGCCCCAATCGCCAC GCCTCGTGGGCCGCATGCAACGCTGCTGATGCGTGAATATGTGTAACCCG CCAGATTGGCTAGGTGCTACAACAGTATTGTTGGAGGAGTTGTCCATTCA AGTATGCACAGATCGTTCAGATTGTCCGATCACTCTGGCACTCGGCCGCG GCGCATGACAACGATGAAGAAGTGCAATTAATTGTGGTTGGTTCCGGTCA ATATTTCGGCTGATGGCGCTTCTCCCTTTTCTAGTGTGCGGGTAGGGCTT AGCTTCGACAAGAAATGGACGATAAAGAGGTCAGGGGGAAGACTTTTCTT TTGTCTTGCTGAGGATGAGATCATTGAGCGGGGTGTTGATTGAACTGATC GGATCCAGTGAGTCGCCACGTTACCGTTGCGTGGTTTCGTGGCCTCAAAT GCCTCAGTTCAACAGTCAACAATGATCGTGAAATTAAGCCCAATTTGTAC TATTTTTCTCGGGGGGCCTCGTGTCTTCTTTATCTTGTTCCGGAAAGGTA GATAAAGTGTTCGGTACTGTTTTGTAGTTTTGTGTGCGTGCCTCTACAAA GACCACCCGAAGATTGTCAACACATCACATGCAGACTCTTGCCGTTTACT CAGAGTTGTTCTCTGTTTTCGCTCTAAATTACAGCCCACAGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6487:1258..9100+

>mRNA_L-elsbetiae_contig6487.15165.1 ID=mRNA_L-elsbetiae_contig6487.15165.1|Name=mRNA_L-elsbetiae_contig6487.15165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2826bp|location=Sequence derived from alignment at L-elsbetiae_contig6487:1258..9100+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGAGGGGGATGCGGCGACCGTCGGCCTCTGTTGCTGTTGCTGCGGC
GGCTCTGGCGCTCTCCTGCAGCAGCACAGCGAGAGCCTTCGTCGTTTCAG
GTCCTTCAAGAGGAGGGCTTCGGTCAAAGATGGCGAGGGGGATGCGGCGA
CCGTCGGCCTCTGTTGCTGTTGCTGCGGCGGCTCTGGCGCTCTCCTGCAG
CAGCACAGCGAGAGCCTTCGTCGTTTCAGGTCCTTCAAGAGGAGGGCTTC
GGTCAAAGGCAACGAGAATGCTAGCCGTGGGCCAGCTGCAGATGAGCAGC
GGCGGCCCACGAGGGCGATCTGGTGCGGGCGCAAGCATTGAGGGGGCGGG
CGGCGCGAAGGTAGTAATCGCCTCGGCGATGCCTATTCAAAGCGTGAGGA
CGCAGCAGCGGTCCATCGGTGCGGACACCGACGAGTACGGGGACAACGGC
AACGAGAATGCTAGCCGTGGGCCAGCTGCAGATGAGCAGCGGCGGCCCAC
GAGGGCGATCTGGTGCGGGCGCAAGCATTGAGGGGGCGGGCGGCGCGAAG
GTAGTAATCGCCTCGGCGATGCCTATTCAAAGCGTGAGGACGCAGCAGCG
GTCCATCGGTGCGGACACCGACGAGTACGGGGACAACGCAGAGATGGTGG
GAGGGGCAGGAGCTGCGTCGGGGCTGCAACCTGAGGATTACCAGGGCTTC
AGCGGGGCATCGGCATCGCAGAGGACCAACCAGATGGTCGACCCCAACAG
CCGAGAGGCCACTTTGAGCCGGAAGAACAATCTTCTCCTTTCGGGCCTGG
TGTTGGCTACCATCACAGCAGAGATGGTGGGAGGGGCAGGAGCTGCGTCG
GGGCTGCAACCTGAGGATTACCAGGGCTTCAGCGGGGCATCGGCATCGCA
GAGGACCAACCAGATGGTCGACCCCAACAGCCGAGAGGCCACTTTGAGCC
GGAAGAACAATCTTCTCCTTTCGGGCCTGGTGTTGGCTACCATCACAGCG
GCGGGGTGGGTAACGGGTACGGCGTTCGTCAATAGGCAGACAGACCTGGT
CGAGGCTTTCGCTGATGAGATGACGTACCACGTCGGCGACGAAAAGGAGA
TGGAGCTCTGCATCAAGGAGTACAAGGGGAAGCTCGGTCCCACGCTGTAC
CGAGAGGCCATGTTCAAGCGGCGGGGTGGGTAACGGGTACGGCGTTCGTC
AATAGGCAGACAGACCTGGTCGAGGCTTTCGCTGATGAGATGACGTACCA
CGTCGGCGACGAAAAGGAGATGGAGCTCTGCATCAAGGAGTACAAGGGGA
AGCTCGGTCCCACGCTGTACCGAGAGGCCATGTTCAAGGGGTGCATGCTT
GCCATCGGACAGAAGAAGGCGATGACGCTGGAGACCGTGAGGGCGGTCAA
GTTCATCTTCAAGCAATTCCGCCTTAACGCGGTGAAGGGGTGCATGCTTG
CCATCGGACAGAAGAAGGCGATGACGCTGGAGACCGTGAGGGCGGTCAAG
TTCATCTTCAAGCAATTCCGCCTTAACGCGGTGAAGGGGGTGAAACTCTT
GGTTGTGGCGGCGCGGAGCACGGATAGGTCACAGTCGAACGTGCGCTCCA
AACTGCTCTTCCTCGGGGGGCTGATCGCTAAGGGAGATGAAAAGGCTGAA
AAGGCTTTGGAGGGGGTGAAACTCTTGGTTGTGGCGGCGCGGAGCACGGA
TAGGTCACAGTCGAACGTGCGCTCCAAACTGCTCTTCCTCGGGGGGCTGA
TCGCTAAGGGAGATGAAAAGGCTGAAAAGGCTTTGGAGCCGTTGAAAAAA
AACGTCGAGTCATCTTTCCGTACTGACGGAGCTACGATGCTGAAGATCAG
GAACGACAACATGGCCGAGACAGCGTTGAAGGCTGCGACCGTTGAAAAAA
AACGTCGAGTCATCTTTCCGTACTGACGGAGCTACGATGCTGAAGATCAG
GAACGACAACATGGCCGAGACAGCGTTGAAGGCTGCGATCGAGGCTGTAC
CGGACGGTCAAATGCTGGAGTCAGGCTGGGAAGAGCTGGGAATGGACGAC
CAGTGGGCGGCGAGGGTGGCAACCGAAATGGCCGATGATGACAACCCGGC
ATTGCCCATCGACTTTTACAAGTCGAGGCTGTACCGGACGGTCAAATGCT
GGAGTCAGGCTGGGAAGAGCTGGGAATGGACGACCAGTGGGCGGCGAGGG
TGGCAACCGAAATGGCCGATGATGACAACCCGGCATTGCCCATCGACTTT
TACAAGACGGGAGGGGCGGCGACCAACGATGCCGAATCGGACCCGGAAGC
GGCCGAGGCTCTTGCTGCCCTCGAGGCGGACATGGAGGCCAAGAAGACGG
AGCCACAGGACGAGAAGGAGCCAGAGGCGGAGGGGTCAGCCAAATCTTAC
GAGTGCCAAGTCTGCGGACGGGAGGGGCGGCGACCAACGATGCCGAATCG
GACCCGGAAGCGGCCGAGGCTCTTGCTGCCCTCGAGGCGGACATGGAGGC
CAAGAAGACGGAGCCACAGGACGAGAAGGAGCCAGAGGCGGAGGGGTCAG
CCAAATCTTACGAGTGCCAAGTCTGCGGGTACAAGATGTTCGTAGCCAAG
GGCCGAGAGTTTAAGTTCTTCGGAGATGGCTTCAAGTGCCCGGAGTGCGG
AGCGGGGAAGAACAAGTTCACAGAGGCGGACATGGACGACGATTTACTTT
AGGTACAAGATGTTCGTAGCCAAGGGCCGAGAGTTTAAGTTCTTCGGAGA
TGGCTTCAAGTGCCCGGAGTGCGGAGCGGGGAAGAACAAGTTCACAGAGG
CGGACATGGACGACGATTTACTTTAG
back to top