prot_L-elsbetiae_contig6478.15155.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6478.15155.1
Unique Nameprot_L-elsbetiae_contig6478.15155.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: A0A6H5JAA6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA6_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 8.110e-71
Identity = 133/174 (76.44%), Postives = 143/174 (82.18%), Query Frame = 0
Query:    3 GANAIVVRADDAT--AAATDGGGAPRPGGGERAAGAMGAPSGDDSEGEQ--EVGSVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPRAYQDRLQETEPERALVSQVRRIADDA 172
            G NA+VVR +DA   AAA D     R GGG  A   +       S GE+  EVG V+ PRA+GLTGDDFQCNICWE+LARPVTL CGHTACESCMAKYLRAQAQAQAQIGN+RANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFP AY++RLQETEPERALVSQVRRIADDA
Sbjct:  385 GTNAVVVRDEDAATAAAAADA----REGGGREAGAGL-------SSGEEGGEVGFVAAPRAEGLTGDDFQCNICWEMLARPVTLACGHTACESCMAKYLRAQAQAQAQIGNVRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPSAYRERLQETEPERALVSQVRRIADDA 547          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: D7G4J4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J4_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 7.640e-69
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0
Query:   50 EVGSVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPRAYQDRLQETEPERALVSQVRRIADDA 172
            EVG V+ PRA+GLTGDDFQCNICWE+LARPVTL CGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFP AY++RLQETEPERALVSQVRRIADDA
Sbjct:  170 EVGFVAAPRAEGLTGDDFQCNICWEMLARPVTLACGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPSAYRERLQETEPERALVSQVRRIADDA 292          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: A0A836CBF7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.950e-8
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query:   67 FQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRI---SCPAGCQRMIPLVLPEVTTMVQKLL 140
              C IC ELL RPVTL CGHTACE C A++L     +  +     A  +   +CPAGC   + L LP V+ ++ K++
Sbjct:  289 LDCPICLELLYRPVTLPCGHTACELCFARFLTPFTPSTRRRAGASARALGDPACPAGCSTPLALALPAVSCVLAKVI 365          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: UPI001457E81D (bifunctional apoptosis regulator-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457E81D)

HSP 1 Score: 54.7 bits (130), Expect = 1.720e-5
Identity = 35/120 (29.17%), Postives = 53/120 (44.17%), Query Frame = 0
Query:   54 VSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPRAYQDRLQE--TEPERALVSQVRRIADD 171
            + +P        + +C  C+ELL  P TLVCGHT C  C+AK+             + + R  CP           P+V  M++ +L   F +    R QE  TE  R L+ +   +A+D
Sbjct:   13 IQMPMMSTEDHGEAECGCCFELLVEPTTLVCGHTFCRHCLAKW------------TVTSGRRLCPTCKSEWRGS--PKVNIMIRNMLENAFSQKLAARTQEVDTEENRRLIKRFDAMAND 118          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: A0A665VHJ5_ECHNA (Bloodthirsty-related gene family, member 12 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665VHJ5_ECHNA)

HSP 1 Score: 53.9 bits (128), Expect = 3.420e-5
Identity = 30/99 (30.30%), Postives = 49/99 (49.49%), Query Frame = 0
Query:   53 SVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRM--------IPLVLPEVTTMVQKLLTRG 143
            SVS P+ + L+ D F C+IC E+   PV+  CGH+ C++C+  Y               + + SCP  C++         +  VL E+++  Q L+T G
Sbjct:    3 SVSSPKGRVLSEDQFSCSICLEVFVEPVSTPCGHSFCKACLQGYWN------------HSKKFSCPM-CKKTYSKKPEMSVNRVLAEISSQFQGLMTAG 88          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: UPI0011142BF1 (uncharacterized protein LOC115059257 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=UPI0011142BF1)

HSP 1 Score: 53.9 bits (128), Expect = 3.860e-5
Identity = 30/99 (30.30%), Postives = 49/99 (49.49%), Query Frame = 0
Query:   53 SVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRM--------IPLVLPEVTTMVQKLLTRG 143
            SVS P+ + L+ D F C+IC E+   PV+  CGH+ C++C+  Y               + + SCP  C++         +  VL E+++  Q L+T G
Sbjct:    3 SVSSPKGRVLSEDQFSCSICLEVFVEPVSTPCGHSFCKACLQGYWN------------HSKKFSCPM-CKKTYSKKPEMSVNRVLAEISSQFQGLMTAG 88          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: UPI000C6FB824 (uncharacterized protein LOC111661711 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6FB824)

HSP 1 Score: 53.9 bits (128), Expect = 3.870e-5
Identity = 30/99 (30.30%), Postives = 48/99 (48.48%), Query Frame = 0
Query:   53 SVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRISCPAGCQRM--------IPLVLPEVTTMVQKLLTRG 143
            S+S PR + L+ D F C+IC E+   PV+  CGH+ C++C+  Y               + + SCP  C++         +  VL E++T  Q L+  G
Sbjct:    3 SISSPRGRVLSEDQFSCSICLEVFVEPVSTPCGHSFCKACLQGYWN------------HSKKFSCPM-CKKSYSKKPEMSVNRVLAEISTQFQGLMMAG 88          
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Match: A0A0M0JZ56_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZ56_9EUKA)

HSP 1 Score: 53.1 bits (126), Expect = 6.030e-5
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   71 ICWELLARPVTLVCGHTACESCMAKYLRAQAQAQAQIGNLRANRIS-CP-AGCQRMIPLVLPEVTTMVQKLLTRGFPRAYQDRLQETEP 157
            +C ++   PVTL+CGHTAC SC+ ++  +    +A    LR +  + CP A C   IP ++PEV  +++  + +  P     RLQ  EP
Sbjct:    1 MCLDIFIDPVTLMCGHTACRSCLIRHFESIDANRAHREQLRDSGFATCPLARCP--IPFIMPEVNFVLRSTVLQSHPERVAARLQGDEP 87          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6478.15155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JAA6_9PHAE8.110e-7176.44RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G4J4_ECTSI7.640e-6992.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CBF7_9STRA2.950e-841.56RING-type domain-containing protein n=1 Tax=Tribon... [more]
UPI001457E81D1.720e-529.17bifunctional apoptosis regulator-like n=1 Tax=Pect... [more]
A0A665VHJ5_ECHNA3.420e-530.30Bloodthirsty-related gene family, member 12 n=1 Ta... [more]
UPI0011142BF13.860e-530.30uncharacterized protein LOC115059257 n=1 Tax=Echen... [more]
UPI000C6FB8243.870e-530.30uncharacterized protein LOC111661711 n=1 Tax=Serio... [more]
A0A0M0JZ56_9EUKA6.030e-534.83Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 54..172
e-value: 8.2E-15
score: 56.8
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 69..118
e-value: 1.0E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR23327:SF42ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 63..159
NoneNo IPR availablePANTHERPTHR23327RING FINGER PROTEIN 127coord: 63..159
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 65..131
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 69..118
score: 9.952

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6478contigL-elsbetiae_contig6478:7816..9493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6478.15155.1mRNA_L-elsbetiae_contig6478.15155.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6478 7816..9494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6478.15155.1 ID=prot_L-elsbetiae_contig6478.15155.1|Name=mRNA_L-elsbetiae_contig6478.15155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
AGGANAIVVRADDATAAATDGGGAPRPGGGERAAGAMGAPSGDDSEGEQE
VGSVSVPRAKGLTGDDFQCNICWELLARPVTLVCGHTACESCMAKYLRAQ
AQAQAQIGNLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPRAYQD
RLQETEPERALVSQVRRIADDAAAESRRRRRRHHH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR001841Znf_RING