mRNA_L-elsbetiae_contig6469.15145.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI) HSP 1 Score: 345 bits (884), Expect = 9.320e-114 Identity = 232/326 (71.17%), Postives = 241/326 (73.93%), Query Frame = 1 Query: 7 RHGFANRSWTAGGAAAGGGNRTMTFGGRGGPGXXXXXXXXXXXXXXXXLGPAGPPGMDGMGPXXXXXXXXPSQRGXXFFXXXXXGMGRGRGPSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNEXXXXXXXXXXXXXXXXXXXXXXXXKRKRLRPSQKGVDAILDLGPEDAEEXXXXXXX--DPFGHDVYDVQAQPLGE 978 RHGFANR WTA GA G NRTMTFGGRGG GPAG XXXX P GP PPNY+CRRC +PGH I DCPT DSS+DNTRLK+VVGIP SMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQTRGVGPDSLLPNE XXXXXXXXXXXXXXXXXXXXXXX QKGVDAILDL P + XXXXXXX DPFG+DVYDVQAQPL E Sbjct: 2 RHGFANRRWTADGAGTGP-NRTMTFGGRGG-------------------GPAG--------------------------GXXXXXXXXXXAPQGPLPPNYVCRRCFKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEE 281
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE) HSP 1 Score: 330 bits (846), Expect = 9.220e-108 Identity = 208/359 (57.94%), Postives = 219/359 (61.00%), Query Frame = 1 Query: 31 WTAGGAAAGGGNRTMTFGGRGGPGXXXXXXXXXXXXXXXXLGPAGPPGMDGMGPXXXXXXXXPSQRGXXFFXXXXXGMGRGRGPSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNEXXXXXXXXXXXXXXXXXXXXXXXXKR-----------------------------------------KRLRPSQKGVDAILDLGP--EDAEEXXXXXXXDPFGHDVYDVQAQPLGE 978 WTA GA G NRTMTFG GGP X G PPGMD MG +GR R P GP PPNY+CRRC +PGH I DCPT DSS+DNTRLK+VVGIP SMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQ+RGVGPDSLLPNE + KR R QKGVDAILDL P E XXXXXXXDPFG+DVYDVQAQPL E Sbjct: 4 WTADGAGTGP-NRTMTFGRPGGP----AGVGPGGRVGRXPAGVTAPPGMDSMG------------------------VGR-RAPQGPLPPNYVCRRCCKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNERAASERLQEDANRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRLPQKGVDAILDLEPREEXXXXXXXXXXXDPFGNDVYDVQAQPLEE 332
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.780e-48 Identity = 86/160 (53.75%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 280 PSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEF-GGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPN 756 P PPP Y+C+RCS+PGH++ DCPT GD ++DNTR K+++G+P +M+++A+ +++GGGLV+A G+ V +++N +AF KLK+ GGG LLD+LS +AP HLKCP+C I+ DAV++PCC S CDSCVR AL A++ M CPLC GV PD L+PN Sbjct: 239 PGSAPPPAYVCKRCSKPGHYVKDCPTNGDPNYDNTRRKRILGVPSTMLQVAE-EQKGGGLVDAMGRRVVLKSNKEAFAKLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAANS-MQCPLCSRPGVTPDQLIPN 396
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.990e-35 Identity = 78/181 (43.09%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 259 GMGRGRGPS--------GPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 G GRG GP G PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 229 GGGRGTGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 405
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A329T760_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T760_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.970e-35 Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 265 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 GRG GP GP PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 232 GRGAGPGGPVGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC) HSP 1 Score: 145 bits (365), Expect = 1.590e-34 Identity = 79/179 (44.13%), Postives = 103/179 (57.54%), Query Frame = 1 Query: 265 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ---GGG--LVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 GRG P GP PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + GGG +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 232 GRGAVPGGPSTPNLVGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGGGKTVVNAPWGGLAVIEPQNKNFSKLMAQSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSVNNMSPEKLLPNK 406
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A6A4FP78_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FP78_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.040e-34 Identity = 77/179 (43.02%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 265 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 GRG GP P PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 232 GRGAGPGXPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMALSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A2P4X587_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X587_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.810e-34 Identity = 78/181 (43.09%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 259 GMGRGRGPS--------GPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 G GRG GP G PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 223 GGGRGAGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 399
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: W2Q8C9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q8C9_PHYPN) HSP 1 Score: 144 bits (362), Expect = 3.770e-34 Identity = 77/179 (43.02%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 265 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 GRG GP P PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 232 GRGAGPGAPGAPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT) HSP 1 Score: 142 bits (358), Expect = 9.700e-34 Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 259 GMGRGRG-PSGP-----PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 759 G G G G P GP PPPNY+C RC PGH+I +CPT GD FD R+KK GIP S +K + G +VNA G L I ++ F KL GG + LD+ + P HL CP+C ++MSDAV++PCC +S CD C+R AL ++CPLC + P+ LLPN+ Sbjct: 224 GRGAGSGAPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 398 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6469.15145.1 >prot_L-elsbetiae_contig6469.15145.1 ID=prot_L-elsbetiae_contig6469.15145.1|Name=mRNA_L-elsbetiae_contig6469.15145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp SGRHGFANRSWTAGGAAAGGGNRTMTFGGRGGPGGGPGGRGGGRGGRRGGback to top mRNA from alignment at L-elsbetiae_contig6469:758..10407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6469.15145.1 ID=mRNA_L-elsbetiae_contig6469.15145.1|Name=mRNA_L-elsbetiae_contig6469.15145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9650bp|location=Sequence derived from alignment at L-elsbetiae_contig6469:758..10407- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6469:758..10407- >mRNA_L-elsbetiae_contig6469.15145.1 ID=mRNA_L-elsbetiae_contig6469.15145.1|Name=mRNA_L-elsbetiae_contig6469.15145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig6469:758..10407- (Laminarionema elsbetiae ELsaHSoW15)back to top |