mRNA_L-elsbetiae_contig6447.15119.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI) HSP 1 Score: 586 bits (1511), Expect = 6.570e-191 Identity = 369/424 (87.03%), Postives = 389/424 (91.75%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRFRGLVAKVLLLQRWYRCRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRLAGQMLMELWMEEEENERKAEEFRIRRRVWAAAVIRSWVRCMVKKYGVKAQRVAAARIQRAWLRRARNRWLAERVRRVFAVARSGDVDGMMRELRANPDVLFMRDRNDRFKTLLHLAATSGSTSLLSLLDPLPGDVLAVDSDGCTPLHHAAASSKYDVVKFLASRANGRVHAPARIKTTSVDAFMQETRATKRISMRIIQ 1272 S+HLVHQQLNYSGVLEVVRIRREAYPGR PFLEFFERFELLQRQL+ ASV G G ++PSAA+ATEEEAK GCR ILEAFLP+K YQIGHTRVFLKE+GQDMLR CMR VYHRKAA IQACVRAMQGSMKLKEKKAAA+VIH+AAR F+LR R+R +++KVLLLQRWYR R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R AG MLMELWMEEEEN+RKAEEFRIRR AAA+IRSWVR MV+KYGVKAQRVAAARIQRAWLRRARN WL ERV RVFA+ARSGDVDGMMRELR NPDVLFMRDR+DRFKTLLHLAATSGSTSLLSLLDPLP DVL +DSDGCTPLHHAAASSKYDVVKFLASRANGRVHAPARIKT SVDAFMQETRATKRISMRIIQ Sbjct: 983 SAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVDGGGEGGGPSLPSAAHATEEEAKEGCRTILEAFLPEKLYQIGHTRVFLKEKGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLRKRYRSVLSKVLLLQRWYRSRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYAGLMLMELWMEEEENKRKAEEFRIRR---AAAIIRSWVRRMVQKYGVKAQRVAAARIQRAWLRRARNLWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFKTLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRVHAPARIKTDSVDAFMQETRATKRISMRIIQ 1403
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A836CBL8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.340e-42 Identity = 192/447 (42.95%), Postives = 247/447 (55.26%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGG-----PAAQAVPSAAYATEEEAKAGCRCILEAFLPD-KFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRFRGLVAKVLLLQRWYRCRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRLAGQMLMELWMEEEENERKAEEFRIRRRVWAAAVIRSWVRCMVKKYGVKAQRVAAARIQRAWLRRARNRWLAERVRRVFAVARSGDVDGMMRELRANPDVLFMRDRNDRFK-------------------TLLHLAATSGSTSLLSLLDPLPGDVLAVDSDGCTPLHHAAASSKYDVVKFLASRANGRVHA-PARIKTTSVDAFMQETRATKRISMR 1263 S HLV +QLNYSGVLEVVRIRREAYP R+ F EF++RFELL + + + P +P+A A++ EAK R +L + + +++Q+GHT++FLKEEG + LR +R Y+ A + A VR + ++ AA+ I RM R RF+ V KV +L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + R ++E+R AA +I+ R ++ V F A+ G V+ + ++ P+ L +R R +RFK TLLH AA GSTSL+SLLDPLP DVL D+DG TPLHHA AS+KYD+VKFLA+RAN +VH PA ++DA E AT RIS+R Sbjct: 655 SPHLVREQLNYSGVLEVVRIRREAYPVRVSFAEFYDRFELLHARAARVAAXXXXXXXXXPPEWAVLPAAGVASDAEAKVAARAVLTRVMGNAEYFQVGHTQIFLKEEGLEALRRAVRLEYNHYACVVTALVRRRATQKLVARRRTAAITIQKVVRMAQARNRFQKTVRKVQILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL------------RASKEYR------AAEIIQCAWRKSRRERMRXXXXXXXXXXXXXXXXXXXXXXXXXXVDSAFRSAKEGHVNAVAAIIKQFPERLCLRHRRNRFKWQRAXXXXXXXXXXXXXXKTLLHAAAQGGSTSLVSLLDPLPEDVLLRDADGNTPLHHACASAKYDLVKFLAARANTQVHVGPALAGKGTMDAA--ELSATTRISLR 1081
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI) HSP 1 Score: 105 bits (261), Expect = 2.090e-20 Identity = 153/461 (33.19%), Postives = 212/461 (45.99%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAA-------------------------------------LVIHSAARMFLLRTRFRGLVAKVLLLQRWYRCRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRL----AGQMLMELWMEEEEN----ERKAEEFRIRRRVWAAAVIRSWVRCMVKKYGVKAQRVAAARIQRAWLRRARNRWLAERVRRVFAVARSGDVDGMMRELRANPDVLFMRDRND-----------------RFKTLLHLAATSGSTSLLSLLDPLPGDVLAVDSDGCTPLHHAAASSKYDVVKFLASRANGRVHAPAR 1197 +S LV +QL YSGVLEVVRIRREA+P R+ + +F+ RF G + + P A V SA E C+ + +Q+G T+VFL+++G LR +R Y A++IQA R K+ ++ AA LV + ++ +RG QR +R R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +R+ A + +W + E R+A+E + + RVWA + ++Y + A R QR+ RNR L + +VF ARSGDV + R L P +LF+RDR+D + TLLH A G+ +++LL+P ++ D G T +H AAA YD++KFLA RAN V R Sbjct: 966 TSSLVIEQLRYSGVLEVVRIRREAFPMRVTYKQFYRRF--------GTLLVSKDMPTADDVTSAK--AREVGLGVCKAVFGEKEAGSSFQMGKTKVFLRDDGLKRLRAALRLHYFTIASKIQALWRGSLARAKIARQREAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVARQQVSVVKMQATWRG------WRQREWRKREANATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAARKEVAILRKRKRVREETASTRIAAVWRGKSERLYGARRRAKERQAQTRVWA----------LREEY--LQEEAMACRAQRSLRAFLRNRRLRDASIQVFQAARSGDVPTVARHLSEWPALLFLRDRHDGDAHAGMAEGGAEKRVPSYSTLLHAACQGGAIEVVALLEPFLSEITDKDRWGNTAVHVAAAECNYDLLKFLAHRANLEVRKAVR 1398
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.230e-18 Identity = 65/157 (41.40%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRF 471 S LV QQL YSGVLEVVRIRREAYP RIPF +F+ RF++L +G P ++ SA Y +A C+ I+ LP +Q+G ++FL++ G D+LR +R + AARIQA +R G + + A L++ RM LLR +F Sbjct: 807 SPRLVVQQLRYSGVLEVVRIRREAYPTRIPFEDFYRRFDVL--------LGSCKPPTLRS--SAEY------RAACQAIVAKVLPVGGFQLGKRKIFLRDNGLDLLRDAIRDFFASHAARIQALIRGFLGVRRYIHTRKALLLLQRTVRMHLLRKKF 947
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: D7G6I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 7.130e-14 Identity = 55/135 (40.74%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLK 405 SS LV QL YSGVLEVVRIRREAYP R+ ++E + F +L +G ++ S +EEEA+ CR I L +Q+G TRVFLK+ D LR ++A Y A IQA R+ +L+ Sbjct: 861 SSPLVIDQLRYSGVLEVVRIRREAYPLRLDYVEMYRNFRVLAEWKAGGTL------------SPETCSEEEARVMCREICSFALEPDDFQLGRTRVFLKDNALDKLRWALQAKYVSAACSIQAAARSFLARNRLR 983
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 6.970e-13 Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERF-ELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKF-YQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLR 462 SS LV QQL YSGVLEVVRIRREA+P RI F+EF+ RF +L+ + G + G A A + A+A C I L YQ+G +VFLK++G D LR ++ Y A IQ R L+++ AA+ + AR F+ R Sbjct: 806 SSQLVIQQLRYSGVLEVVRIRREAFPTRITFVEFYRRFGQLINWRARGLAPPETIGADAARAAVLNSALADAARAACAEICAKALESTADYQLGTPKVFLKDDGLDRLRWALQQHYVAGATGIQRVWRGYAARKALQQQDKAAIRVQRIARGFIAR 961
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A7S1U3H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.680e-11 Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 10 LVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRFR 474 LV QQL Y+GVLEVVRIRRE YP R+ + +F+ ++E+L ++ AQ +AA A E+ +L+A +K +Q+G T +FL++ G D + +R Y A+ I AC R M+ + + + + RM +L R R Sbjct: 306 LVAQQLRYAGVLEVVRIRREGYPSRMNYFDFYAKYEMLIPYKERQAMKSVADCRAQGDAAAARAASEKI---AHLVLDASDAEKEFQLGGTLLFLRDNGLDKMDAAVREFYAGHASAINACARRFIAVMRYRAARRRVIRAQAFFRMAVLTLRLR 457
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A7S3MGU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGU1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-10 Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 10 LVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAV-PSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRFRGLVAKVLLLQ 504 LV +QL YSGVLEVVRIRRE +P R+ FL+F+++ + G P Q P +AK C I EA L YQ+GHT +FL+++G ++ + +A ++QA VR ++ + ++ S R F R +F+ V+ LQ Sbjct: 1 LVMEQLRYSGVLEVVRIRREGFPIRMTFLDFYKQNYIFAT----------GKPVEQFPDPFTLVGDPVKAKECCASIAEAVLQSHQYQLGHTLIFLRDDGLRVIAEAVTDFRALQAIKLQAVVRGYFTRLEYQFALVCIVICQSVVRKFTQRRKFQRARKAVIRLQ 156
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A6U0ZTV9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZTV9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.020e-9 Identity = 56/149 (37.58%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 1 SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAAR 447 S HL+ QQL YSGVLEVVRIRREAYP R+ F E + F+ L R AS+ Q PA P A + A C+ + E FL +QIG T++FL+ ++L A + KA IQ+ R ++ + A L + + R Sbjct: 135 SPHLIIQQLRYSGVLEVVRIRREAYPTRMRFSELHKVFKTLIR----ASLDIQP-PALDQAPDEAVSL-----AACQRLAERFLEPDHFQIGKTKIFLRHGVMELLTRQQDAFFAGKATVIQSRWRTIRAVRAYRSTLRAVLTMSAVCR 273
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Match: A0A7L0NE71_9PASS (MYO9B protein (Fragment) n=1 Tax=Formicarius rufipectus TaxID=1118560 RepID=A0A7L0NE71_9PASS) HSP 1 Score: 70.5 bits (171), Expect = 3.500e-9 Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 1 Query: 7 HLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVGGQGGPAAQAVPSAAYATEEEAKAGCRCILEAFLPDKFYQIGHTRVFLKEEGQDMLRGCMRAVYHRKAARIQACVRAMQGSMKLKEKKAAALVIHSAARMFLLRTRFRGLVAKVLLLQRWYRCRS 525 +LV QQL Y+G+LE VRIRR Y + F EF ++F++L +P A A++E+ C + + L + +YQIG T+VF+KE + +L+ + RK +Q+ +R + + + AALV+ + R +R + A V + W RCR Sbjct: 839 NLVLQQLRYTGMLETVRIRRSGYSAKYTFQEFIDQFQVL-------------------LPKDAKASKEDI---CAYLNKLKLNENYYQIGKTKVFMKEAERQILQDTLHREVIRKIILLQSWLRMVLERRRFLRTRQAALVLQACWRSRSVRMALQRSGAAVTIQCAWRRCRQ 989 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6447.15119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6447.15119.1 >prot_L-elsbetiae_contig6447.15119.1 ID=prot_L-elsbetiae_contig6447.15119.1|Name=mRNA_L-elsbetiae_contig6447.15119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=424bp SSHLVHQQLNYSGVLEVVRIRREAYPGRIPFLEFFERFELLQRQLSGASVback to top mRNA from alignment at L-elsbetiae_contig6447:1858..10568- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6447.15119.1 ID=mRNA_L-elsbetiae_contig6447.15119.1|Name=mRNA_L-elsbetiae_contig6447.15119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8711bp|location=Sequence derived from alignment at L-elsbetiae_contig6447:1858..10568- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6447:1858..10568- >mRNA_L-elsbetiae_contig6447.15119.1 ID=mRNA_L-elsbetiae_contig6447.15119.1|Name=mRNA_L-elsbetiae_contig6447.15119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2544bp|location=Sequence derived from alignment at L-elsbetiae_contig6447:1858..10568- (Laminarionema elsbetiae ELsaHSoW15)back to top |