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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1063 |
| Cds size | 540 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816710.1224034-UTR-L-elsbetiae_contig6434:4651..4726 | 1622816710.1224034-UTR-L-elsbetiae_contig6434:4651..4726 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 4652..4726 + |
| 1691683756.9341118-UTR-L-elsbetiae_contig6434:4651..4726 | 1691683756.9341118-UTR-L-elsbetiae_contig6434:4651..4726 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 4652..4726 + |
| 1622816710.1467013-UTR-L-elsbetiae_contig6434:5266..5714 | 1622816710.1467013-UTR-L-elsbetiae_contig6434:5266..5714 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 5267..5714 + |
| 1691683756.9514046-UTR-L-elsbetiae_contig6434:5266..5714 | 1691683756.9514046-UTR-L-elsbetiae_contig6434:5266..5714 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 5267..5714 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816710.1363888-CDS-L-elsbetiae_contig6434:4726..5266 | 1622816710.1363888-CDS-L-elsbetiae_contig6434:4726..5266 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6434 4727..5266 + |
| 1691683756.9432735-CDS-L-elsbetiae_contig6434:4726..5266 | 1691683756.9432735-CDS-L-elsbetiae_contig6434:4726..5266 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6434 4727..5266 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6434.15105.1 >prot_L-elsbetiae_contig6434.15105.1 ID=prot_L-elsbetiae_contig6434.15105.1|Name=mRNA_L-elsbetiae_contig6434.15105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MYKQQCLLTELCFRFERCVGALNTLDNPPGVECINTPPSTYTRHIFRHAH
SHVALTLLATMESTQIVPSQPMYPTKYGPTDNYRISTRDRQRSLTAPRRA
PDEWGADFSWRISVDAAESYGFLFKEKPKPTQRKRPLVFAPRPPHSRGER
APSPPSIQKTKRTPRPRMTPLPGRDTDSD* back to topmRNA from alignment at L-elsbetiae_contig6434:4652..5714+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6434.15105.1 ID=mRNA_L-elsbetiae_contig6434.15105.1|Name=mRNA_L-elsbetiae_contig6434.15105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1063bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:4652..5714+ (Laminarionema elsbetiae ELsaHSoW15)
GGTATCATGTGACTGTGCCAGCGGGGGCAACAACAAAGAAAAAAGAAAAA
TACAGCAGTTGACAATACAGTACATATGTATAAACAACAATGCTTACTTA
CAGAGCTTTGCTTTCGTTTCGAGAGGTGCGTGGGGGCACTAAACACCCTG
GACAACCCGCCTGGTGTTGAATGCATAAATACCCCACCCTCAACATACAC
CCGACACATTTTTCGACACGCGCACTCTCACGTCGCACTCACCCTCCTTG
CAACAATGGAGAGCACCCAAATCGTACCAAGCCAGCCTATGTACCCGACA
AAATATGGACCTACAGACAACTACAGAATATCTACACGGGACCGACAGCG
CTCGCTGACAGCACCCCGGAGAGCCCCGGACGAATGGGGGGCTGACTTTT
CGTGGCGAATCTCGGTTGACGCCGCCGAAAGCTACGGTTTTCTTTTCAAA
GAAAAACCTAAGCCGACGCAGAGAAAGAGACCGCTCGTTTTCGCCCCCCG
CCCCCCCCACTCGCGTGGTGAACGAGCGCCGTCTCCCCCCTCCATCCAAA
AAACAAAAAGGACACCGAGACCAAGAATGACACCACTTCCAGGGCGAGAT
ACTGATTCGGACTGACACTCTGCCACCATCGACCGTTTTGTTCTCTATAG
CACAAGCATAAGCATTCCAACACACCATCAGCAACAACAACAGCAGCAGC
ACCAGAAGCAGCAGCAGCAGCCGCCGCCGTAGGACACAAGGCATGAGAAC
CCCGCAGACCTAAAAACTGGCCGAACGCTGCTGCCTTATACATCTAAGCT
GAGGTATCGTCCTCAGCCCGGAAGGTATCGCTTCGTGCAAATAGCGATCC
TTCCGACATTTAAAAAAAGGAACGGGACTCAAAATAGAGGCACCATCTTC
CCCAGGGCAGACAGAGCCACAAAACCCAAATCCCGTTGCCAACAAGCTAC
TGCTGCTGCTGCTGTGTTGTGTGCTGTGCTTCATTCCGAAACAACCCGTC
TCTCCACCCCGAATGCTCTTGCGTGTCGCAAGTATGCTTGCTCGGGCATA
GGGTGTGGGTGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6434:4652..5714+ >mRNA_L-elsbetiae_contig6434.15105.1 ID=mRNA_L-elsbetiae_contig6434.15105.1|Name=mRNA_L-elsbetiae_contig6434.15105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1080bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:4652..5714+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATAAACAACAATGCTTACTTACAGAGCTTTGCTTTCGTTTCGAGAG
GTGCGTGGGGGCACTAAACACCCTGGACAACCCGCCTGGTGTTGAATGCA
TAAATACCCCACCCTCAACATACACCCGACACATTTTTCGACACGCGCAC
TCTCACGTCGCACTCACCCTCCTTGCAACAATGGAGAGCACCCAAATCGT
ACCAAGCCAGCCTATGTACCCGACAAAATATGGACCTACAGACAACTACA
GAATATCTACACGGGACCGACAGCGCTCGCTGACAGCACCCCGGAGAGCC
CCGGACGAATGGGGGGCTGACTTTTCGTGGCGAATCTCGGTTGACGCCGC
CGAAAGCTACGGTTTTCTTTTCAAAGAAAAACCTAAGCCGACGCAGAGAA
AGAGACCGCTCGTTTTCGCCCCCCGCCCCCCCCACTCGCGTGGTGAACGA
GCGCCGTCTCCCCCCTCCATCCAAAAAACAAAAAGGACACCGAGACCAAG
AATGACACCACTTCCAGGGCGAGATACTGATTCGGACTGAATGTATAAAC
AACAATGCTTACTTACAGAGCTTTGCTTTCGTTTCGAGAGGTGCGTGGGG
GCACTAAACACCCTGGACAACCCGCCTGGTGTTGAATGCATAAATACCCC
ACCCTCAACATACACCCGACACATTTTTCGACACGCGCACTCTCACGTCG
CACTCACCCTCCTTGCAACAATGGAGAGCACCCAAATCGTACCAAGCCAG
CCTATGTACCCGACAAAATATGGACCTACAGACAACTACAGAATATCTAC
ACGGGACCGACAGCGCTCGCTGACAGCACCCCGGAGAGCCCCGGACGAAT
GGGGGGCTGACTTTTCGTGGCGAATCTCGGTTGACGCCGCCGAAAGCTAC
GGTTTTCTTTTCAAAGAAAAACCTAAGCCGACGCAGAGAAAGAGACCGCT
CGTTTTCGCCCCCCGCCCCCCCCACTCGCGTGGTGAACGAGCGCCGTCTC
CCCCCTCCATCCAAAAAACAAAAAGGACACCGAGACCAAGAATGACACCA
CTTCCAGGGCGAGATACTGATTCGGACTGA back to top
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