mRNA_L-elsbetiae_contig101.150.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: B5LWA6_9PHYC (Putative sensor histidine kinase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA6_9PHYC) HSP 1 Score: 148 bits (373), Expect = 2.180e-36 Identity = 122/421 (28.98%), Postives = 195/421 (46.32%), Query Frame = 1 Query: 43 MRMMSNCIREIQAPVSDLCGLRSVMAEIPEESTLYHHAKVMNNCGTLLAEMIVNMKLYYTLSADLYEIVNSQFCLRREVEIIWESLIADREAQ---DKLSDIDKSGKKILKIRLNFNENVSGGLVESDKMCV*RFLSVCLKRDPFHTGR*GFSRRLLG*YRVP*TES*YTNATFQNFG----------LWYRSTRGH-------SGGNFRTSYQSSRRVGRGRRWYGTRDRESLMRSSSWEFGIGGSRTKVETFIDFEIPAT*Q*STPC**VRRGGERSSVDNCRGRRYGADALHS-PCRGCSTEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLEHRHRVWMS 1242 +RMM +C+REIQ PV+DL GL ++ ++ +S+LY +A MN G LLA MI NM+LYY LS+ +Y+ S F LR E+ + W SL + + + I ++G KI + E V +V +D + + + T G ++ +V T N + G L+ TRGH +G + + RR+G +D R+S + +F + G+ S D+ R+ ++ H +I+ + + I I TA DG E + C+S +FD+I MDI MPR+ G+EA + IK CPLN +TPV+ALT + + M EC+ GMV ++KP+ RKKL+ + ++ + +W+S Sbjct: 54 IRMMISCLREIQTPVNDLLGLTDIVPKMDPDSSLYLYAVCMNTFGNLLARMIENMRLYYQLSSGIYDPTYSNFVLRSEIHLFWRSLTSQARSHRMGENYPTIVRTGDVSCKICIL--ETVPNDVVSTDTKVLQKIFHALVDNAIRFTQE-GLIEVIVSCQKVGKTGY-VLNLVVSDTGVGVPTELRQILFEPMTRGHVESVAGGAGMSLAVARLLCRRLGGDVTLDDDKDCGCTFRASLRFDSVSEGWPSPVWENEFVL---------------SGKAVSTDD--RRQSESEMPHILVVDDIRLNREILKHHFKRLGIKIFTACDGDEAVKECVSKKFDLIFMDIYMPRLNGVEACKLIKRECPLNLNTPVVALTVSSSTMDHNECLRAGMVEMVTKPVDRKKLIHVSCRSMDPKKSLWIS 453
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: Q6XM27_9PHYC (FirrV-1-B9 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM27_9PHYC) HSP 1 Score: 140 bits (352), Expect = 1.640e-33 Identity = 121/428 (28.27%), Postives = 204/428 (47.66%), Query Frame = 1 Query: 43 MRMMSNCIREIQAPVSDLCGLRSVMAEIPEESTLYHHAKVMNNCGTLLAEMIVNMKLYYTLSADLYEIVNSQFCLRREVEIIWESLI--ADREAQDKLSDIDKSGKKILKIRLNFNENVSGGLVESDKMCV*R-FLSVCLKRDPFH-----------TGR*GFSRRLLG*YRVP*TES*YTNATFQNFGLWYRSTRGHS-------GGNFRTSYQSSRRVG-----RGRRWYGTRDRESLMRSSSWEFGIGGSRTKVETFIDFE-IPAT*Q*STPC**VRRGGERSSVDNCRGRRYGADALHSPCRGCSTEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYL-EHRHRVWMS 1242 +RMM +C+REIQ PV +L GL ++ + E S+L+ +A +N G LLAEMI N++LYY L + YE V S F L E+ ++W++LI A ++ Q + + ++G ++ L ++NV +V +D +C+ + F +V F T G S+ +L + V T F+ L+ T+GHS G + R +G + G+ ++ GS ET +FE +P++ ST ++ D R + + + +I+ L V++ + + DG + C +D+ILMDI MP+M GI+A +KIK CPLN TP++AL+G+ +C+ GM + KPI + L++TI + L + H+ W++ Sbjct: 33 VRMMISCLREIQLPVKNLMGLTDIIPVMDENSSLHEYAVTINTFGVLLAEMIDNIRLYYQLCSGTYEYVPSDFILLSELRVMWQNLIMKATQKTQRRFF-VHRTGD--IRCSLTISDNVPNAIVSTDALCLQKVFYAVIYNAIRFTQEGEVKVTVSATNNTGQSQCMLN-FIVSDTGI-GVPRDFRGI-LFEPMTKGHSDTVEGGTGMGLAVARLLCRELGGDLVLTDQLTEGSTFHAFILLKCRSIVSWQGSEWHEETTFEFEELPSSRLPSTVTPHIKED------DRQMPRILVVEDI-------ALNREILRHSLNRVHVNVTMSLDGEDAIHKCEEMTYDLILMDIYMPKMNGIDACKKIKQECPLNADTPIVALSGSTCTDTMKDCLAAGMTEMMVKPISHRVLIKTIYETLTKPEHQQWLT 441
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: A0A525C326_9DELT (Response regulator n=1 Tax=Desulfovibrio sp. TaxID=885 RepID=A0A525C326_9DELT) HSP 1 Score: 81.3 bits (199), Expect = 5.940e-15 Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 889 TEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLEH 1221 T ++ +L + + + A DG E EA S FD++LMD+ +PRMGG+E T++I+++ P ++ P+I +T ++G+ C++KP+ + + T+ KYL H Sbjct: 14 THVRLFKDILEETHATVHVAGDGFEALEAMKSATFDLVLMDLRLPRMGGMETTRRIRESGPPHRDVPIIGMTAFTMPQDAEIGSDLGLTQCVAKPVDPDRFLATVSKYLPH 124
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: A0A317CJG6_9GAMM (Histidine kinase n=1 Tax=Leucothrix arctica TaxID=1481894 RepID=A0A317CJG6_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 2.910e-14 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 901 IVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHT--PVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLEHR 1224 + + +L+ I TANDG+EG EAC F ++LMDI MPRMGGIEA QKI++ + P+IALT E + GM L+KPI + KL +T+V +L+ R Sbjct: 469 VATALLKKCGFKISTANDGIEGVEACEKEDFSLVLMDIQMPRMGGIEAMQKIREMMKDSGRVMPPMIALTANAMEGASEEYMSKGMDDYLTKPIDQDKLGKTLVHWLDQR 578
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: A0A2E4NYS9_9GAMM (Histidine kinase n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A2E4NYS9_9GAMM) HSP 1 Score: 85.1 bits (209), Expect = 4.830e-14 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 901 IVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETI 1203 I S ML+ + I + A DGVE L +Q+DII MDI MPR+ G+EAT++I++ +N TP+IALT C E GM +SKP +++LV++I Sbjct: 538 IASEMLKSMGIEVHAARDGVEAVAMALISQYDIIFMDIRMPRLNGLEATRRIREGGGINAVTPIIALTANAEKTQIGRCKEAGMDDFISKPFTQERLVQSI 638
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: A0A4R1NXP8_9RHOB (Histidine kinase n=1 Tax=Shimia isoporae TaxID=647720 RepID=A0A4R1NXP8_9RHOB) HSP 1 Score: 84.3 bits (207), Expect = 7.010e-14 Identity = 60/190 (31.58%), Postives = 86/190 (45.26%), Query Frame = 1 Query: 676 ESLMRSSSWEFGIGGSRTKVETF------IDFEIPAT*Q*STPC**VRRGGERSSVDNCRGRRY---GADALHSPCRGCSTEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLE 1218 + L+ E G+ K TF I+ E P P E ++V N G R GA L + T IV R L+ + I ++G E C T+FD+ILMDI MP M G+EA +IK LN TP++AL+ + A + GM ACL KP + +L + +V+ +E Sbjct: 396 KELVELHGGEIGVTSQPGKGSTFWFTVPIIEVEAPVPAATPAP-------SEPANVPNAPGDRECLKGAKVLVA--EDTRTNQVIVQRFLQSMGIEPVIVDNGRAAVEHCTQTKFDMILMDIQMPEMDGLEACARIKSEGALNASTPMVALSANILPEQTASYISAGMAACLGKPFRKAELSDVLVRLIE 576
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: UPI0019A94222 (Response regulator n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019A94222) HSP 1 Score: 84.0 bits (206), Expect = 8.580e-14 Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 901 IVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETI 1203 ++SR+L++ +QTA+DG+ G EA L FD+ILMD+ MPR+GG+EAT K++ N P+IALT +C++ G L+KPI R +L+ TI Sbjct: 429 LISRLLKNSGAEVQTADDGLLGVEAALKKNFDLILMDVQMPRLGGLEATLKLRQQ---NYDKPIIALTANALKGDREKCLQAGCNDYLTKPIQRHELISTI 526
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: UPI000EF50053 (response regulator n=1 Tax=Poseidonibacter antarcticus TaxID=2478538 RepID=UPI000EF50053) HSP 1 Score: 84.3 bits (207), Expect = 9.960e-14 Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 823 VDNCRGRRYGADALHSPCRGCSTEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYL 1215 +DN + Y DA + I +ML+ I + ANDG+E E C FD+ILMD+ MPRM G ++T+ I++ +K TP+IALT + E+GM LSKPI +L+ I KYL Sbjct: 839 IDNKKQNDYIIDAKILVVEDNNINQLICEQMLKKFGITVTLANDGIEAIEICKKNHFDMILMDLHMPRMNGFDSTKHIRE---FDKKTPIIALTAAVMSEDKILSNEVGMQEHLSKPIDFDELIRCINKYL 966
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: UPI001BA73E57 (ATP-binding protein n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BA73E57) HSP 1 Score: 83.6 bits (205), Expect = 1.420e-13 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 898 KIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLE 1218 ++V ML + ++ A DG+E A +FD+ILMD+ MPRM G+EAT++I+ LN TPV+ALT + A C+E GM LSKPI KLV TI ++ + Sbjct: 575 ELVRAMLEAMGHRVEEAGDGLEAVNAAHRLRFDLILMDLHMPRMDGLEATRQIRARSALNCDTPVVALTANVLDADIASCLEAGMDDHLSKPIVPAKLVATIGQWTD 681
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Match: A0A2G4JRR6_9CAUL (Histidine kinase n=2 Tax=Caulobacter sp. B11 TaxID=2048899 RepID=A0A2G4JRR6_9CAUL) HSP 1 Score: 83.2 bits (204), Expect = 1.660e-13 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 889 TEPKIVSRMLRDVNIYIQTANDGVEGFEACLSTQFDIILMDISMPRMGGIEATQKIKDNCPLNKHTPVIALTGTLAGMVGAECVEIGMVACLSKPIGRKKLVETIVKYLE 1218 T +I+ +L I A+ G + + C +T FD++LMD+ MP MGGIEAT ++D+ +N TPVIALT + EIG+ A ++KPI L++T+V+ LE Sbjct: 460 TNQRIICLLLEPFGCLITLADHGRDALDLCAATAFDVVLMDMQMPVMGGIEATMALRDSQGVNARTPVIALTANALSEHRDQWREIGVEAFVTKPISLDHLIDTLVEALE 569 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig101.150.1 >prot_L-elsbetiae_contig101.150.1 ID=prot_L-elsbetiae_contig101.150.1|Name=mRNA_L-elsbetiae_contig101.150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp MRMMSNCIREIQAPVSDLCGLRSVMAEIPEESTLYHHAKVMNNCGTLLAEback to top mRNA from alignment at L-elsbetiae_contig101:40093..41418- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig101.150.1 ID=mRNA_L-elsbetiae_contig101.150.1|Name=mRNA_L-elsbetiae_contig101.150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig101:40093..41418- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig101:40093..41418- >mRNA_L-elsbetiae_contig101.150.1 ID=mRNA_L-elsbetiae_contig101.150.1|Name=mRNA_L-elsbetiae_contig101.150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig101:40093..41418- (Laminarionema elsbetiae ELsaHSoW15)back to top |