mRNA_L-elsbetiae_contig6429.15100.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6429.15100.1
Unique NamemRNA_L-elsbetiae_contig6429.15100.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 4.260e-144
Identity = 218/232 (93.97%), Postives = 222/232 (95.69%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696
            RAK YKSDW+DGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGM YAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFL+TLA VGASNLIEFATQFTDDVFNALLSVNFIYEA RSLMRNFSPA AG+TQAGALMSLNVAVATYVGCRKTSGALSS  FN G REFMSDFGPLVVIVGMS FCALPSW+GLLSFLEV
Sbjct:  228 RAKFYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWNGLLSFLEV 459          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A6H5KFP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP7_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 3.570e-77
Identity = 128/142 (90.14%), Postives = 132/142 (92.96%), Query Frame = 1
Query:  271 TSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696
            TSVAGLPFLPVYAWVGLWTSAFL+TLA V ASNLIEFATQFTDDVFNALLS+NFIYEA RSLMRNF+PA AG+TQAGALMSLNVAVATYVGCRKTSGALSS  FN G REFMSDFGPLVVIVGMS FCALPSW GLLSFLEV
Sbjct:   10 TSVAGLPFLPVYAWVGLWTSAFLATLAFVEASNLIEFATQFTDDVFNALLSLNFIYEAARSLMRNFNPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEV 151          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A0G4H159_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H159_VITBC)

HSP 1 Score: 254 bits (649), Expect = 5.580e-76
Identity = 129/232 (55.60%), Postives = 167/232 (71.98%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696
            R   YKSDW DG+  KS+PA++F+YFACL PAVAFGGIA  +T G++GV E++V+CG GGMAY+ F GQPMTFIGPTGLTLAF T+LY+F     LPF+P+Y+W GLWTS +L  LA+ GA  LI++ TQFTDDVFNALL+ NF+YEA  SL+ NF  +  G  + G L+SLNVA+ATY   R+ S +   + FN   R  +SDFGP++ I+ MS    LP +  +  FL+V
Sbjct:  184 RRPFYKSDWLDGLRPKSIPAVLFMYFACLAPAVAFGGIAASITGGSMGVPEFLVACGCGGMAYSVFSGQPMTFIGPTGLTLAFTTALYAFCRQWSLPFMPLYSWTGLWTSLWLMLLAVAGAPELIKYCTQFTDDVFNALLACNFVYEAAASLLGNFMRS--GLDKTGPLLSLNVALATYFLARRLSLSYRWRFFNKNIRAILSDFGPVLTIISMSLVATLPLFRSI-EFLKV 412          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA)

HSP 1 Score: 244 bits (624), Expect = 5.200e-75
Identity = 131/233 (56.22%), Postives = 165/233 (70.82%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGL-LSFLEV 696
            R  +YK DW  G   KSL    F+YFACL+PAVAFGG A QVT G +GV+EY+V+CG  G+AY+ F GQPMTF GPTGLTLAF+T+L++FTS A LPFLPVY W GLWTSA +  LA  GASNL+ +ATQFTDDVFNAL+++NF+ EA   L RNF    AG +  GAL+++NVA A+Y+  +  + A  S  FN G RE +SDFGP++ I  M+    LP+ S + L FL V
Sbjct:   30 RLPLYKDDWKTGFRAKSLSTTAFMYFACLMPAVAFGGFAQQVTGGAMGVVEYLVACGGSGVAYSLFSGQPMTFTGPTGLTLAFITALHAFTSAAALPFLPVYTWCGLWTSALMVALAAGGASNLVRYATQFTDDVFNALIALNFLAEACGGLARNFKLGGAGGS-GGALLAVNVAGASYLLTQALTQARGSVYFNKGVREQVSDFGPVLAIAAMTAVSHLPAVSSIGLDFLSV 261          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S1TE13_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE13_9RHOD)

HSP 1 Score: 225 bits (574), Expect = 7.270e-69
Identity = 112/222 (50.45%), Postives = 151/222 (68.02%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPS 666
            R  +Y SDW +G+  KS+PA+MFLYFACL P +AFGG+   +T G +G++E++VS  + GMAYAAF GQP+T IGPTGLTLAF T+LYSF    GLPFLP+Y+WVGLWT A L  L +  AS++I + T+FTDDVFN+L++ NF+YEA RSL   F  +  G  +    M+L++A+ TY+  R  +    ++      REF +DFGP + I  MS    LPS
Sbjct:   84 RVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYEASRSLASGFKSS--GSDKTKPFMALSLALGTYILGRSLAEFRRTRFLRRSVREFFADFGPTIAITAMSALSLLPS 303          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: W7TSJ0_9STRA (Anion exchanger family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ0_9STRA)

HSP 1 Score: 232 bits (592), Expect = 7.370e-69
Identity = 120/226 (53.10%), Postives = 160/226 (70.80%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGL 678
            R  +YKSDW DGV  K+LP I+FLYFACL PAVAFGGI+  +TQG +GVIE++VSCG+ GM YA F GQPMTFIGPTGLTL FM +L++F S  G+ F+P+Y WVG+WTS  L  L+   A +L +  T+FTD+VFNALL++NFIYEA++++   F       TQ   L++LN+A+AT+   ++     SS +F    REF+SDFGP + I+ M+F  +LP  S L
Sbjct:  177 RLPLYKSDWVDGVKGKTLPTILFLYFACLAPAVAFGGISYGLTQGAMGVIEFLVSCGMSGMLYAIFSGQPMTFIGPTGLTLCFMAALFNFCSSFGVAFMPMYTWVGIWTSLMLGLLSSANACSLTKHCTRFTDEVFNALLALNFIYEALKNIAVRFFTTGTDKTQP--LLALNMALATFALSQRLVSYRSSILFTHRIREFLSDFGPALTIIIMTFVGSLPMVSSL 400          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S1TD95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD95_9RHOD)

HSP 1 Score: 225 bits (574), Expect = 6.800e-67
Identity = 112/222 (50.45%), Postives = 151/222 (68.02%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPS 666
            R  +Y SDW +G+  KS+PA+MFLYFACL P +AFGG+   +T G +G++E++VS  + GMAYAAF GQP+T IGPTGLTLAF T+LYSF    GLPFLP+Y+WVGLWT A L  L +  AS++I + T+FTDDVFN+L++ NF+YEA RSL   F  +  G  +    M+L++A+ TY+  R  +    ++      REF +DFGP + I  MS    LPS
Sbjct:   84 RVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYEASRSLASGFKSS--GSDKTKPFMALSLALGTYILGRSLAEFRRTRFLRRSVREFFADFGPTIAITAMSALSLLPS 303          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S2YSC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSC6_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.130e-66
Identity = 118/218 (54.13%), Postives = 149/218 (68.35%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPA-VAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMS 645
            R  VYKSDW DG    +K  PAI FLYFACL PAV+FG I++ +T  TLG++EY++S  L GMAY+   GQPM FI PTGLTLAF++ LY F +  GLPF P+Y+WVG+WTS     L L GA +LI F T+FTD+VFNALLS+NFIYEAVRSL RNF+ A  +  T     +SL++A  T+    +T+    S+ FN   R F+ DFGP+ V V MS
Sbjct:  144 RRAVYKSDWVDGFKDLKKCFPAISFLYFACLAPAVSFGTISSLITHNTLGIVEYMLSTSLSGMAYSLICGQPMAFIAPTGLTLAFISGLYRFCTQKGLPFFPIYSWVGIWTSVLFIILGLGGAGSLIRFCTRFTDEVFNALLSLNFIYEAVRSLRRNFAEADPSNLTMP--FVSLSIAWGTWFLTARTAAFEYSRFFNQKVRTFVKDFGPVSVFVAMS 359          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC)

HSP 1 Score: 226 bits (576), Expect = 1.430e-66
Identity = 122/219 (55.71%), Postives = 151/219 (68.95%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFF 651
            R KVY SDW DG    RK +PAI+FLYFACL PAV+FG IA+++TQG++G++E+++S GL GMAYA   GQPM FI PTGLTLAF++ LY F  V  LPF P+YAWVGLWTS F   L L G+S LI F T+FTD+VFNALLSVNFIYEAV SL RNF  A          +SL +A++T+    K +   SSK  N   R  + DFGP+ + + MS F
Sbjct:  175 RKKVYWSDWEDGFKNKRKVIPAILFLYFACLSPAVSFGTIASEITQGSIGIVEFLLSSGLSGMAYAMMCGQPMAFIAPTGLTLAFISGLYRFCMVKALPFFPIYAWVGLWTSFFFVLLGLGGSSQLIRFCTRFTDEVFNALLSVNFIYEAVASLKRNFDLADP-MNLTMPFVSLAMALSTFWCTAKVAAFESSKYLNQKIRSIVKDFGPVTIFILMSIF 392          
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S3XU83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU83_HETAK)

HSP 1 Score: 217 bits (552), Expect = 3.640e-64
Identity = 110/216 (50.93%), Postives = 151/216 (69.91%), Query Frame = 1
Query:    1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNF-SPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMS 645
            R  ++  DW DG+  +++ A +FLYFACL PAVAFGG++  +T G LGV+E +++ G GG AY+   GQPMTFIGPTGLTL F  +L+SF ++ GLPFLP+++WVGLWTS FL+ L+  GASN I++ TQFTDDVFN+LL+VNF+YEA+RSL  NF + A AG  Q  A  SLN+A+A Y   R+ +    ++  +   R   +D GP+  I  +S
Sbjct:   47 RLPLWVQDWRDGLAPQTVAASLFLYFACLAPAVAFGGLSAALTGGQLGVVEVLMATGFGGAAYSFLSGQPMTFIGPTGLTLVFTAALHSFCALRGLPFLPMFSWVGLWTSGFLALLSATGASNGIKYCTQFTDDVFNSLLAVNFVYEALRSLWGNFRAAAAAGADQTSAFFSLNLALAYYALSRRVTAFRGTRYLSEQLRGVAADLGPVAAIFALS 262          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G110_ECTSI4.260e-14493.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFP7_9PHAE3.570e-7790.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4H159_VITBC5.580e-7655.60Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A836CJA6_9STRA5.200e-7556.22Bicarbonate transporter n=1 Tax=Tribonema minus Ta... [more]
A0A7S1TE13_9RHOD7.270e-6950.45Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
W7TSJ0_9STRA7.370e-6953.10Anion exchanger family n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S1TD95_9RHOD6.800e-6750.45Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2YSC6_9STRA1.130e-6654.13Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FQY4_PHATC1.430e-6655.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3XU83_HETAK3.640e-6450.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6429contigL-elsbetiae_contig6429:593..9315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score429.1
Seed ortholog evalue1.3e-117
Seed eggNOG ortholog2880.D7G110
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.inorganic anion exchanger activity
EggNOG OGsKOG1172@1,KOG1172@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionBicarbonate transporter, eukaryotic
Ec32 orthologEc-22_001570.1
Exons5
Model size696
Cds size696
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6429.15100.1prot_L-elsbetiae_contig6429.15100.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6429 593..9315 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816709.8258762-CDS-L-elsbetiae_contig6429:592..6971622816709.8258762-CDS-L-elsbetiae_contig6429:592..697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 593..697 -
1691683756.7549267-CDS-L-elsbetiae_contig6429:592..6971691683756.7549267-CDS-L-elsbetiae_contig6429:592..697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 593..697 -
1622816709.838596-CDS-L-elsbetiae_contig6429:1251..14011622816709.838596-CDS-L-elsbetiae_contig6429:1251..1401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 1252..1401 -
1691683756.7657723-CDS-L-elsbetiae_contig6429:1251..14011691683756.7657723-CDS-L-elsbetiae_contig6429:1251..1401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 1252..1401 -
1622816709.8519125-CDS-L-elsbetiae_contig6429:4467..46421622816709.8519125-CDS-L-elsbetiae_contig6429:4467..4642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 4468..4642 -
1691683756.7752461-CDS-L-elsbetiae_contig6429:4467..46421691683756.7752461-CDS-L-elsbetiae_contig6429:4467..4642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 4468..4642 -
1622816709.863462-CDS-L-elsbetiae_contig6429:6058..62011622816709.863462-CDS-L-elsbetiae_contig6429:6058..6201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 6059..6201 -
1691683756.7852957-CDS-L-elsbetiae_contig6429:6058..62011691683756.7852957-CDS-L-elsbetiae_contig6429:6058..6201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 6059..6201 -
1622816709.875743-CDS-L-elsbetiae_contig6429:9192..93151622816709.875743-CDS-L-elsbetiae_contig6429:9192..9315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 9193..9315 -
1691683756.7960205-CDS-L-elsbetiae_contig6429:9192..93151691683756.7960205-CDS-L-elsbetiae_contig6429:9192..9315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6429 9193..9315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6429.15100.1

>prot_L-elsbetiae_contig6429.15100.1 ID=prot_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVI
EYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLP
VYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVR
SLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFRE
FMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV
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mRNA from alignment at L-elsbetiae_contig6429:593..9315-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6429.15100.1 ID=mRNA_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8723bp|location=Sequence derived from alignment at L-elsbetiae_contig6429:593..9315- (Laminarionema elsbetiae ELsaHSoW15)
AGGGCCAAGGTGTACAAGTCCGACTGGACCGACGGAGTGAACCGCAAGTC GTTGCCGGCCATCATGTTCCTGTACTTCGCGTGCCTTCTCCCAGCGGTAG CCTTCGGCGGAATCGCCACTCAGGTAAATTCATCAGTACGAACGTCCATG TTAAAAGAAGCAGCAATGCCAGTATTGTAGTGCTTAGGCCCATTCTGCTG GCATAAATTAGCTTTTAGCATAATTCGCACTTGAGAGCATACGATTATGC TCTGTTTTTTGGAGCATACAGGAGGGCATATTTGCCACTTTTCGCCTTCG GCGGAATCGCCACTCAGGTAAATTCAGCAGTACGAACGTCCATGTTAAGA AGCAGCAGTGCCAGTTTTGGTTTTCTTCCGCGGCGTCGAGTGGTGTGTGC CTTGTTTTGTGACCACGGGCCCCTAAGGATGTTTTGGACTAGAGAGCTAA TGTGAGAAACAACAACAACAACAACAACAACAACAACAACAACAACCGTA GGTGACACAAGATACCACATCCCCCGGACCGAATTTTAGAGCTGCATTGC TCCGTAACGAAGAGGGCGCCAGTGCCGGAAGGGGTGGCGTTGGAAAGATC CAGTCGAGGGCTGTTTGAAAACGTATACTTCGGTGCTGGCGCCGTCTTCG GTACGGAGTAATGGAGCTCTAAAATTCGGTCCAGGGGGTGTGGTATCTTG TGTCACCTACGGTACATATGCCCATTATGCTGGCATAAATTAGCTTTTAG CATAATTCGCACTTGAGAGCATACGATTATGCTCTGTTTTTTGGAGCATA AAGGGGGGCATATTTGCCACTTTTCAGCAGAATGGGATTTTTGAGCATGA ATTGAACATAATTGGCCTTTTTTTGGAGCATTGAAGCATAATTGGTGGGG TTGAAAAAAAGAGCACATGCCCCTTAACCCCTCTGGGACTTCAAGCGGGT TTTGGTGATTACAAGAAATGATCATTGAGACGCCCGGTTTTGTGCGGACC TGGGCTGGTCGGCACATATCGGGACGATAACATAACAATCGATATATGGT CACATGGACACCCAGATGGGGTGGCACAGCAGCGGCAGGGGTTGTAACGC TATGTTTCGTCTCCGGCAGCTTGCCACAGCTTCTGCCGCCGCTGCTGCTT GGCTGTTGCATTTGGGAGTTGGTGGTTATTGGTTAAATATTTACGAAAAA ATTGGTTTTGCTCTCGCTCTCATCCCACACACCCACACATCGCATGACGG AGCATGCCAGCAGGACAGACATACACACTCGCACCACCAGCACAATCTAT ACAACATACATCGCCAAACACCTCTTCGATTTCCACCAGCAACCGGTGTA GATCGATCTGGTTGCTGTTGCCGTTGGGTATTATTGCAAAGTAACCGAGC GCCAGAGGTTGGACTCTATCCGGCGGCCCCCCGAGAAGTACAGAAGTACG CTATGGCTGCAGGGGACTTCAGTGCCAAAAAAGTGATCATTTTTTGTGAT TATATGGTATATACTGAATTTAGAGTACTTTCAGAAGAGTTCAGAGCCCG GGACAGCGCCACAAAGAAGAATAAAGCTTCGAGCGAACACTAGCAGTGAC GTTTCGAGGGCCGATTAAGCTTTCTAGTGTGCCAACAGACGTCCCCAGTG TGTTGCGGCGACACGGCCGAGGTGCATGTTTTGCTGCTGGGTTGACTTCT GCAACCTGAAGTCTCTTTTCAGAGCAGAGAAAAGAGAACCTGCGTACAGA TACGCTGCGGACCCGTTTTTTTTGCACAGTCCCGCCGTGTTTTCTGGACT GTTCGCCTTGCGGCTTGTGATGAGCCTAGTCCCAGAGGGGTTAAAAAAAG GAGCATAAGATAAGCGGGAAAAACGCAAAATGGGCGTAACTAAGCCTATC TACGCAGGGTTTTCATCTTTTCATCTTGAGCTGGCATAAAGATACCACAC CCCCTGGACCAAATTTTAGAGCTCCATTACTCCGCAACGAAGAAGGTGCC AGCACCAAACGACACATTTTCGGACAGCCCTTGACCAGATCTTTCCAACG CCACCCCCTTAAGGCACTGGCACTCTTCTTGCGGGGTAGGAATCGAGCTT TGAAAATCTGTCCAGGGGGTGTGGTATATTGTGTCACCTACGGTAGTCTA CGCAGGGTTTTCATCTTTTGATCTTCAGCTACCATATGAGATAAAGTATA GGCCTAAGCCTATCTACGCAGGGTTTTCATATTTTCATCTTGAGCTACCG TATGAGATAAAGTATGGAAACCGGGAAAGGGGGGTCGGTAGTTGGGATCT GATGGGATCAGGGTTGGGGTTATTTTCATAGATAAACTTAATTTCCGGCG AAGGCGGTCCTGGAGAGGGCCCCGTCGGCTGCAAGGAGAGACGTATGTAT GTGCCAAGGAGAGAGAGAGAGATGGTTCCCACTTCTATTGTCGGTAGTCT ACTCACGGTACAAAGCCTTCAGCTAACATACATATGAGATATCGGTGGTT GGGGTTGAGATCAGGGTTAGGGTTGTTTTCATCCTAGATAAACTTAGTTT CCGGCGTAGGCGGTCCAACAGTGCACGGCTCACAAACGGGAGTCAACATC GTTTGTCAAGGGCACCCTCTATCAAGCCAATTCTGGAATGGGTAGGGGGT CTCGAAGAATCATGTCCACACAGGCAGGGGGGTGGGTGTCTTGGGCTCGT CGCCCCCTCCCGCCGGAATCGCCGTATACGACTGGCAAGATAACACACCC CCTGGAACTGCGATTTCCAAAGCTCGGTTACTCCGCAACGAGTTTGTGGT TATAATACCAAACGACCACGTTTTCGGGCAGCTCTTGGTGATACTTTTTC AACGGTGCCCTTTTCGGAACTGTCAACTATTTTTCGCTGTGGAGTATATT ACTCTTGAATTTTGAAAATCTGTCCAGGGGGTGTGTTTATCTTCGTGTCG CTATGGTGTGCACACACTACATGTCCTCTTCATCCTCGTCTTCTTCTTCA TCCTATTATTTTCAACCCCCCCCCCCCCCATCCTCATTTTCTTCTGCATC CTCCTATTTTCAACCCCCCATCCCCCCCCCATCCTCATTTTCTTCTGCAT CCTCTTATTTTCAGGTCACCCAGGGCACGCTCGGAGTGATCGAGTACGTG GTTTCCTGCGGCCTGGGCGGGATGGCGTACGCCGCGTTCGGCGGGCAGCC GATGACCTTCATCGGCCCGACCGGGCTAACGTTGGCCTTCATGACCTCGC TCTACAGGTATATACCTACACGATTGCTGGTGTTGTTGTGCACGATTGTT GGTGTTGTTTGTACACGATTGTTTGTGTTGTTTGTCCACGATTGTTTGTG TTGTTTGTACACGATTGTTGGTGTTGTTTGTACACGATTGTTGGTGTTGT TTGTACACGATTGTTTGTGTTGTTTGTACACGATTGTTGGGGTTGTTTGT ACACGGTTGTTGGTGTTGTTTGTACACGATTGTTAGTGTTGTTGTACACG ATTGTTGGTGTTGTTGTCTTGACATGAAAAAACCGTTCCGGTATCTCCTA TCCAATACCTCCATCATGTTGTGGTTGTTAAATATAAATCAATGAATCAA AAATGGAACCTAGCCCACATGAGAGCCAAGATTGCCATGGCGGTTGTTGT TGTGACAGTCCCGTGACAGTCCCGTGCGGTACCATCGTCCCCCTTGCGCC GAGTTGGGCTTTTTCGTTAAACCCGCCCAACCCATGGCGAATCTTACAAC AGAGCTCGAGACGAACTAATATCACGACACGGTCGCCGCAACACCACGCC ACGAGGCACAAAAACAAAACAAAAGCAGCAAACCTGGAATTTGCCTTATA TTAATAACTCTACAGCAGTACCGTCCCCGTCCCGCGACAGTCCCGTGACA GTCCCGCGACAGTCCCGTGACAGTCCCGTGACAGTCCCGTTGTGGTGCGG TTAAATACAAATCAGTGCATCAAAAATGGAACCTAGCCCACATGAGAGCC AAGACTCTATGGGTTTCAGACGGTATTCCATTAAGTGACGTAATATTGGT TCAGTAGAGTAGAAAAACACCTAAAACAATGTTTTAATTCACAGTAAAAA CGGTTCCGATCTTCATGACCTCTCTCTGCAGGTACGCTAATCTACTGGTT TATTCTTGATTTTTTTCTTGATTTTTTTATTTTATGTGGAGTAGAACTGT CAATCAAGAGCCACTGGCTGACGATTTGCTTATATCTCGTCTGTGAATGC TCTGACCGGCACGCTGAAGTGCTCAAACGAAAGCCAACGGCGGGCTGCCG AATATTAAAAAAAAGGGTCTCCGCGGATTGTGTGCGGAGGTACATATGCC AATTTGTAAAAGTTTGTCTCTTTATAGGCAGGTGTCTCTTAATTGGCGGT TACTCTGCTGCTGCTGTCTGTATTTTCTTCTTTTTCGACTAACTCTTGCC CTGCTTATAGCGTAGGTGACACAAAATATCACACCCCCTGGACAAATTTT CAAAGCTCGATTCCTCGCCCGCAAAAAGCGCCACTGCCTTGAGGGGGGTG GCGTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAATGTATCGTTTTGGTG CTGGCACCCTCTTTGCGTAGTGAAGCAGCTCTCCTGCCTGCCTGCTCGCC TGGTTGGGGGTACGCATGTGCAGCTTTACATCAGTTGCGGGGCTCCCCTT TCTGCCGGTGTACGCGTGGGTCGGGCTGTGGACGTCGGCGTTCCTGTCGA CGCTCGCGCTGGTCGGGGCGTCCAATCTCATCGAGTTCGCCACGCAGTTC ACGGACGACGTCTTCAACGCCCTCCTCTCCGTCAACTTCATCTACGAGGT GCGCGATGCCGTTGTCGTCGTCGTTGCTGTTCTTACATTGTTGTCGTTGG CGTTGTCGTTGTTGTCGTTGTTGTTGTTATGTTGTTGTTGTTGTTGTTGC CGCTTGTTCTATTGTTGATGTTGCTCCATATTGTTCGCCCAAAACCAAAC AATTAATTAATGGAATTAAAAAAAAACACACCATATATTATATTTATCTA GAGTACATGGACACACAAAACCAAATAATTACTTGATTAATTAAAGAAAA AACACACCATATATTATATATATCTAGAGTACATGGGCACATCGTCTTCT TGTTGTTTTTGTTGTTGCTGTTGCTGCTTGCCCTATTGTTATTGCTCTGT TGTTGCTCCTCCCCGTCAACTTCATCTATGAGGTGCGCGATGCTGTGTGT GTTTTCTCGGTAAATACGCACACGAGCATCGGCCGCGCTTCCTTTCTTTT TTCAGTATACCTAAATGTACCCTTTTCAGTGTAAATGCATCCTTTTGGGG TAATTGTACCCTTTTTAGTCTAAATGTACGCTTTTAGCGTAAATGTACCC TTTTCAGTGTAAATGCATCCTTTTAGGGTAAATGTACCCTTTTTAGTCTA AATGTACGCTTTTAGGATAAATGTACCCTTTTTAGTCTAAATGTACCCGT TTTAGGGTAAATTTTCCTGTGACCACGGGAATCGACTGCGTCAGTGTTAG ATTAGTACGGGCTTACGGAGGTGTGTCTGGATAAATAGAGATCCGGACGA GTTTTAAGTCAAGACAACAACAGCAACAACAACCTGCATACATTACCAGA TTACTCAAGAAATGACGTGCGCAGGCTTATATAGCGGGCAGATGACGTGC AAACGCTTTCTCGAGTGTCAAGATCAAGAACCCTTGGTAAGGGTTGTTGT TGTTGTTTCTCACACTAGCTTTCTAGTCCAAAACATCCTTGGGGGCCCGT GGTCACAAAACAAGGCACACTCGACGCCGCGGAAGAAAAATAAAACAAAC ATATGGTACATACGCGCCCGGTAGTACTAAACTGGACCCCGGGGGGTCTT GCGTCTCGCCAGCACAAAATCAAGAGTATAGTACATACTACTCGGAAGAG AAAATAAAAGAAAGTTCGTGTGTGTGTGAGTGTTTTTTTGTTCGCCAAAC GAGTCGCTGTGTTTCTTTTGTTTGTGGGGCCGGCGGCGCCCCTCCCTGGT GCTTGTGTGAGAACGGCTCTTAATCCTTGTCCAGCAACCAGCTGCAAACG CTATTCATCTTTCATCTGTTTTCTTGTCCACATTTACTTTCCAGTGCTCG ATGGGCTCCTTCGGCCACGAGGGCATCCTGCCAGAGTACGGAACCGTGGT CACACAGGAGGGTCTCTTTCCCCAAGGCCCCCACTCCCTCTCCCCGATAC CCCCACTCTCACCTGCTTAAAAAAAAAAAAAAAAAATGAATCAAAGATGG AACTAACCCCACACTAAAAGCAAAGACTCGATATGGGGTTCAAACGGTTT TCCATACAGAGACGTAATATTTGGCGAAGCGAGCAGAAAAAACAACCTAA AATATCAGAAGGGTTCAACATCTCCCCCTGCAAAGATTTAAGATTTGCGA GGTCGGCCAACAATTATTCGGGCGGGTAGATCCCGCCGTGATGCCGAAAT GTTGTCATCTACTTCAAAATAGATTTTTTTTTTCGCGAGGAGGGTTCACC TGTCCCTTGCCCCCCCGTCGAAGGTGAGGTCGAAGTTTTCGGGATGTACT ACCGTAGGTGACATAAGATAAGACACCTCCTGGACCGATTTTCAAAGCTC AAGTACTCCACAACAAGCAGAGCGTCGGTCCCGAAAAGGGCGGCGCTGGA AAGATCTCGTCGAGAGCTGTCCGAAAATGTGGCGTTTGTGGTTAGAATCG TAATCGTTGCGGAGTAACCAAGCGTTCAATATCGGTCCAGGGGGTGTCTT ATCTTATGTCACCTACGGTACTGTACCAAATATGTACCATACACATTTAG GACTCTCTCCAATCCTCGAATATCAGCCCAAGAACTACTCTAGATCCATG TCCAGCAACCAGCTGCAAATGCTATTATACCTACGTATACAAGGGTTGGC CGCTCGCGCGGCCCCGCCTGTATTATTGAAAACGCTTCCAAGGCAATGCT AAATATATCCTCTGTGAAGCACCAAACATATGTACTGCTGCTGTTGTCGA GGTGTGACACAAATCGACAGCAGTTGCGTTTCGAACAACACAATAAAACT TCCGAAAAGCACCCGTCTGCAAGAGGCGAATGCCAGCTTCCACCAGCGAC TCTCTGCGACCCCATTAAAGTGCACATAATAAAGGGTGTGCAGAACTGTG CCCTCCTTACTAGACGGTGCGGCCGCGAGAGTGTACCCGTGTGCACCGTA TCACACAAGGTACATACATCTATCTAGAGTGCCTCGCAGTAGGGTACACG CCGGCTTGCGCTTGACCCCTTCGGCGTGTTCACCGTTCGGCGAATAAAAG CCGACTCTCAAGCGAGAGTCAAATTTACGCAGAGACTGATTCGGAAGTTC TGCATCTGGCAACAAACAAACAGAGACCGAGACAGGAAGAGAAGAAGCTG TACCGTGGGGAAAAGAGCGAGAGTGAGAAGGCCTGGATTGCACTACTGCT GGGAAGGGTATGTAGCCAGCCACCTAGGAGGTGCTGCGATGGAAGCGGAG CGAGAACAACTAACTCCAGACCGCAGGATATCCAGAATTCCGGAATAACG AGCTATCAGGCACTCAGCTGTCAGCAGATTGTTGTTTCACAACAAGTCCA TAAACCAGTACTTCTTCATGTTTAGTTAGGCCTCTCGCATCAATCCTCAC GTATAGACTACAAGAATATACTCACCAGAGGCCAAGTCCGAGTCGAGAAT GAATCGAAACAAGACAGCAGCGAGTTTAACGTCGTGGTCGCTCACATACT TGCCGCTCGGCGCTGCCCCCCCCCCCCCTCTGCATGCGCATCCACTGTAC CCCCCTGAACGCGCATCCGCTGCATCCCCTGCACGCGTATCGGCATCCGC ATCCGCATTCTTAGGCTGTGCGATCGCTGATGCGGAACTTTAGCCCGGCG GTGGCGGGCTTCACCCAGGCCGGCGCGCTGATGAGCCTCAACGTGGCGGT CGCGACCTACGTCGGGTGCCGCAAGACGTCGGGGGCGCTCAGCTCCAAGG TCTTCAACAGCGGGGTGAGAGGTGGTCTGTTGGTAGTCGTGATCATGGTC GGGTGCTGGTGGTGGTCAGGTTGCTGCTGCTTGATGTAGTTGTTGTCGTT ATCATGGTCGTGTGCTGGTGGTGGTCAGGTTGCTGCTGCTGCGTTCAGGT TGCTGTTACTGCGTTGCTGTTGTTGCTGCTGTTGCTGTTGCTGTTGTTAC TGTTGTTGTTTTTGTTGGTGTTGTTGATGTTGGTGGTGATGATGATGATG ACGTGGTTGTAGTACGCAGGGGGTGACGCGGTTTGTGGCGGTGGCGGGTC ACGGGTCACCGCACGACCCGACCCGACTCTGCCTCGGCCAGAGCGAATCT AGCGAAACTCAGATCTTGTGGTGGCAAAAAAGCGAAAACCCAAAATTCAG GTCATCCATAAAAACACACACGAACACAGGAAAATAATAAACCAAGGGGT CCGAGGAGATATGTAGTTCGCAACACTTTTTTTCTACGGAGTTGTGTGGT GGTGTGTGTTTCAATACGCCGTGCCCCCGCCCGGCCGTACCGGCCGCCTC CCTCGCCGGAAACGACAGTTCCGGGAGTTTATGTCCGACTTCGGGCCGCT GGTGGTAATCGTCGGCATGTCTTTCTTCTGCGCGCTGCCCTCGTGGTCGG GCTTGCTGAGCTTCCTGGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6429:593..9315-

>mRNA_L-elsbetiae_contig6429.15100.1 ID=mRNA_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig6429:593..9315- (Laminarionema elsbetiae ELsaHSoW15)
AGGGCCAAGGTGTACAAGTCCGACTGGACCGACGGAGTGAACCGCAAGTC
GTTGCCGGCCATCATGTTCCTGTACTTCGCGTGCCTTCTCCCAGCGGTAG
CCTTCGGCGGAATCGCCACTCAGAGGGCCAAGGTGTACAAGTCCGACTGG
ACCGACGGAGTGAACCGCAAGTCGTTGCCGGCCATCATGTTCCTGTACTT
CGCGTGCCTTCTCCCAGCGGTAGCCTTCGGCGGAATCGCCACTCAGGTCA
CCCAGGGCACGCTCGGAGTGATCGAGTACGTGGTTTCCTGCGGCCTGGGC
GGGATGGCGTACGCCGCGTTCGGCGGGCAGCCGATGACCTTCATCGGCCC
GACCGGGCTAACGTTGGCCTTCATGACCTCGCTCTACAGGTCACCCAGGG
CACGCTCGGAGTGATCGAGTACGTGGTTTCCTGCGGCCTGGGCGGGATGG
CGTACGCCGCGTTCGGCGGGCAGCCGATGACCTTCATCGGCCCGACCGGG
CTAACGTTGGCCTTCATGACCTCGCTCTACAGCTTTACATCAGTTGCGGG
GCTCCCCTTTCTGCCGGTGTACGCGTGGGTCGGGCTGTGGACGTCGGCGT
TCCTGTCGACGCTCGCGCTGGTCGGGGCGTCCAATCTCATCGAGTTCGCC
ACGCAGTTCACGGACGACGTCTTCAACGCCCTCCTCTCCGTCAACTTCAT
CTACGAGCTTTACATCAGTTGCGGGGCTCCCCTTTCTGCCGGTGTACGCG
TGGGTCGGGCTGTGGACGTCGGCGTTCCTGTCGACGCTCGCGCTGGTCGG
GGCGTCCAATCTCATCGAGTTCGCCACGCAGTTCACGGACGACGTCTTCA
ACGCCCTCCTCTCCGTCAACTTCATCTACGAGGCTGTGCGATCGCTGATG
CGGAACTTTAGCCCGGCGGTGGCGGGCTTCACCCAGGCCGGCGCGCTGAT
GAGCCTCAACGTGGCGGTCGCGACCTACGTCGGGTGCCGCAAGACGTCGG
GGGCGCTCAGCTCCAAGGTCTTCAACAGCGGGGCTGTGCGATCGCTGATG
CGGAACTTTAGCCCGGCGGTGGCGGGCTTCACCCAGGCCGGCGCGCTGAT
GAGCCTCAACGTGGCGGTCGCGACCTACGTCGGGTGCCGCAAGACGTCGG
GGGCGCTCAGCTCCAAGGTCTTCAACAGCGGGTTCCGGGAGTTTATGTCC
GACTTCGGGCCGCTGGTGGTAATCGTCGGCATGTCTTTCTTCTGCGCGCT
GCCCTCGTGGTCGGGCTTGCTGAGCTTCCTGGAGGTGTTCCGGGAGTTTA
TGTCCGACTTCGGGCCGCTGGTGGTAATCGTCGGCATGTCTTTCTTCTGC
GCGCTGCCCTCGTGGTCGGGCTTGCTGAGCTTCCTGGAGGTG
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