mRNA_L-elsbetiae_contig6420.15093.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6420.15093.1
Unique NamemRNA_L-elsbetiae_contig6420.15093.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6420.15093.1 vs. uniprot
Match: D8LLE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE9_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.090e-68
Identity = 200/483 (41.41%), Postives = 256/483 (53.00%), Query Frame = 1 
Query: 1315 SSTAGCLSEVGDGHGYWDCMGRKADGGVHHNGGVRADVDQNERAVASVVLLRWVVECFVGNEDEGIVGGVPNGGHRVEVPTR-----ISQVGDDAAGGASTFRG---KGKAMNATISGPIHLVHSERKPRDSDLFPLS-DIES---NGKGSADTSSSPRIIS--SFAATSPTYLPSSRRRNSERSKEALQSIPREVRVSIGG-------------GW--ERRSPPENNH-RYSDLSVA-HAPPGLETTNAANNEKEPGGRSSWTASRTCTTALRGESTED-----VRSTT-RWLTPAAQDVALHALVCLLRAAEVDVCGHMETDTLDAGGGRVLDSDNADGGRAVLMKDCVLLLILRTCAMFQDHDGVVKACCMLMRVGVQCSLSDGGPKGPVGGPMTPYMVLLIEHGVEGVVTQAAMAHVGNMSVITEASALLRTLGLPPV----INSTCSS---ALXXXXXXXEDSDLMAGAVMTVEAVTK 2631
            S  AG   ++ DG+GYWD +G     G   + GV A  +  E AVASVVLLRW +EC V N+ EG   G  +G   V V T       +  GD A    +  R    +G+A++AT  G + L  S RKPRDSD F  S  +E+   + +G  D      +I   SFAAT P+   SS  R   R K+ L   PR + +S GG              W  E + PPE +  R +D  VA  + PG E       +K+   R  W  +R                  +R+   RWL PAA +VALH LVCLLRAAEVD+CGH  T  L       LD D   GGRAV+M++ VLLLIL+ CA FQDH  VVK CCMLMRVGV C+L   G + PVGGP+ P M LLI++ VEGVVT+AA AHV N+SV  EASALL +LG+  +      +TCS+   A        + +   A  V+TV+AVTK
Sbjct:   10 SKPAGYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAG-ELAESAVASVVLLRWAMECVVANDGEG---GAEDGDGVVPVTTAPRDGLTADDGDPAKAPVAEDRTPGMQGEAVSATAKGQVRLAKSTRKPRDSDRFSFSGSLETKLASHQGEGDCRGPRNVIGNKSFAATCPSLSESSCNRERLRDKKPL---PRGLPLSGGGRXXXXXXXXXXXXXWKGEEQQPPEGDRGRPADGIVATSSSPGDEP------KKDARRREGWRDARXXXXXXXXXXXXXXXXXXMRTVPKRWLAPAAHEVALHTLVCLLRAAEVDLCGHNGTHRLQT----ELDVDTVGGGRAVVMEEGVLLLILKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLLIDNDVEGVVTRAAKAHVDNLSVAAEASALLHSLGMDSIRIDASGATCSALPPAPPTPPPAGKSALGPAAVVVTVDAVTK 475
[Close]
BLAST of mRNA_L-elsbetiae_contig6420.15093.1 vs. uniprot
Match: A0A6H5KV03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV03_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 3.730e-62
Identity = 204/555 (36.76%), Postives = 260/555 (46.85%), Query Frame = 1 
Query: 1315 SSTAGCLSEVGDGHGYWDCMGRKADGGVHHNGGVRADVDQNERAVASVVLLRWVVECFVGNEDEGIVGGVPNGGHRVEVPTR----ISQVGDDAAGGA-----STFRGKGKAMNATISGPIHLVHSERKPRDSDLFPLS-DIE---SNGKGSADTSSSPRIIS--SFAATSPTYLPSSRRRNSERSKEALQSIPREVRVSIGGGWERRSPPENNHRYSDLSVAHAPPG---------LETTNAANNE--KEPGGRSSWTASRTC-----TTALRGESTEDVR----------------------------------------STTR-----------------------------------WLTPAAQDVALHALVCLLRAAEVDVCGHMETDTLDAGGGRVLDSDNADGGRAVLMKDCVLLLILRTCAMFQDHDGVVKACCMLMRVGVQCSLSDGGPKGPVGGPMTPYMVLLIEHGVEGVVTQAAMAHVGNMSVITEASALLRTLGLPPV----INSTCSSALXXXXXXXED---SDLM-AGAVMTVEAVTKAS 2637
            S + G   ++ DG+GYWD +G     G   + GV A  +  E AVASVVLLRW +EC V N+ EG   G  +G   V   T     ++   DD    A      T   +GKA++AT +G + L HS RKPR SD F  S  +E   +N  G  D     + I   SFAA+ P+   SS  R   R K+     PRE+ +S G                       P G         + T+ +  +E  K+   R  W   RT      +TA   E  ED+R                                        ST+R                                   WL PAA +VALHALVCLLRAAEVD+CGH  T+ L       LD D   GGRAV+M++ VLLL+L+ CA FQDH  VVK CCMLMRVGV C+L   G + PVGGP+ P M LL+++GVEGVVT+AA AHV N+SV  EASALL +LG+  +      +TCS AL       +    SDL  A  V+TV+AVTKAS
Sbjct:   10 SKSVGYEKDLADGNGYWDLLGENCCRGHGLDDGVLAG-ELAESAVASVVLLRWAMECIVANDGEG---GAEDGDGVVPGTTAPRNGLTTADDDEPAKAPVAEDGTPSMQGKAVSATATGQVRLAHSARKPRGSDRFSFSGSLERKCANHHGEGDCRGPRKAIGNKSFAASCPSLSESSCNRERLRDKKPF---PRELPLSGGRXXXXXXXXXXXXXXXXXXXXXXPEGDRGRPAGGIVVTSPSPGDEAKKDERHREGWRDGRTPRVAGKSTASGDEPVEDMRTFPKRYAAAPKMYCFWLVGAPSLLSAPWNDLHNPGSPQRRSTSRNVIFEERRMGLFKSVSSGLNPSCLPASLLSSADRTWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQT----ELDMDTVGGGRAVVMEEGVLLLVLKACARFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPGMALLVDNGVEGVVTRAAKAHVENLSVTMEASALLHSLGMNSIRIDASGATCS-ALPPAPPTPQPAGKSDLEPAAVVVTVDAVTKAS 552
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6420.15093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLE9_ECTSI3.090e-6841.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV03_9PHAE3.730e-6236.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6420contigL-elsbetiae_contig6420:1130..8367 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size2637
Cds size2637
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816709.183042-CDS-L-elsbetiae_contig6420:1129..12071622816709.183042-CDS-L-elsbetiae_contig6420:1129..1207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 1130..1207 +
1691683756.3116627-CDS-L-elsbetiae_contig6420:1129..12071691683756.3116627-CDS-L-elsbetiae_contig6420:1129..1207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 1130..1207 +
1622816709.1938095-CDS-L-elsbetiae_contig6420:1776..18841622816709.1938095-CDS-L-elsbetiae_contig6420:1776..1884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 1777..1884 +
1691683756.3245482-CDS-L-elsbetiae_contig6420:1776..18841691683756.3245482-CDS-L-elsbetiae_contig6420:1776..1884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 1777..1884 +
1622816709.2065265-CDS-L-elsbetiae_contig6420:2583..27031622816709.2065265-CDS-L-elsbetiae_contig6420:2583..2703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 2584..2703 +
1691683756.3376927-CDS-L-elsbetiae_contig6420:2583..27031691683756.3376927-CDS-L-elsbetiae_contig6420:2583..2703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 2584..2703 +
1622816709.2200005-CDS-L-elsbetiae_contig6420:3199..33431622816709.2200005-CDS-L-elsbetiae_contig6420:3199..3343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 3200..3343 +
1691683756.3576295-CDS-L-elsbetiae_contig6420:3199..33431691683756.3576295-CDS-L-elsbetiae_contig6420:3199..3343Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 3200..3343 +
1622816709.2328413-CDS-L-elsbetiae_contig6420:3788..39561622816709.2328413-CDS-L-elsbetiae_contig6420:3788..3956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 3789..3956 +
1691683756.3737876-CDS-L-elsbetiae_contig6420:3788..39561691683756.3737876-CDS-L-elsbetiae_contig6420:3788..3956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 3789..3956 +
1622816709.2437577-CDS-L-elsbetiae_contig6420:5399..55521622816709.2437577-CDS-L-elsbetiae_contig6420:5399..5552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 5400..5552 +
1691683756.3849936-CDS-L-elsbetiae_contig6420:5399..55521691683756.3849936-CDS-L-elsbetiae_contig6420:5399..5552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 5400..5552 +
1622816709.2556236-CDS-L-elsbetiae_contig6420:5900..72071622816709.2556236-CDS-L-elsbetiae_contig6420:5900..7207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 5901..7207 +
1691683756.3955464-CDS-L-elsbetiae_contig6420:5900..72071691683756.3955464-CDS-L-elsbetiae_contig6420:5900..7207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 5901..7207 +
1622816709.2659497-CDS-L-elsbetiae_contig6420:7495..77901622816709.2659497-CDS-L-elsbetiae_contig6420:7495..7790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 7496..7790 +
1691683756.4038887-CDS-L-elsbetiae_contig6420:7495..77901691683756.4038887-CDS-L-elsbetiae_contig6420:7495..7790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 7496..7790 +
1622816709.277648-CDS-L-elsbetiae_contig6420:8103..83671622816709.277648-CDS-L-elsbetiae_contig6420:8103..8367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 8104..8367 +
1691683756.415074-CDS-L-elsbetiae_contig6420:8103..83671691683756.415074-CDS-L-elsbetiae_contig6420:8103..8367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6420 8104..8367 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6420.15093.1prot_L-elsbetiae_contig6420.15093.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6420 1130..8367 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6420.15093.1

>prot_L-elsbetiae_contig6420.15093.1 ID=prot_L-elsbetiae_contig6420.15093.1|Name=mRNA_L-elsbetiae_contig6420.15093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=879bp
QTLVIKTRENDKRRRREHDDTQKTLQERLDEVKFQRVEMASMQAILQDKD
KSLGYFTSELQKTVMKNDKLLKRQKRLEHVEEMLDAFRRKLMVLGRVEAG
EEMRLAVANNRGRQGEEDSAALGPDTWGAGRRVPPAGGLPGVGLVPLLME
AMAQFPENVKLTRDALALLGHIASMESLGRTFLTTHSLYHEVVLALRRHV
GDEVVVLYGARLLHKSALQGEAISRDLRAAGVIPLLAEALAAASYGLSGA
RKPRRLLYHAFATIQLCYPDGFYGNSIQALRLPKNTKPKHHKSTSSPTCH
LSTTGLEVVRKSKAAVASLPSASTDTVAARNETIGLPDPTIPRRNSGMLG
AKAGEEADPCGKPGGSIYCPAIPHSKSPPRRRCGSSVEATARAPRLQPLP
SAARRQTCSVVREEENSDTRRGSGKLSHPTNHSMKQSGSSTAGCLSEVGD
GHGYWDCMGRKADGGVHHNGGVRADVDQNERAVASVVLLRWVVECFVGNE
DEGIVGGVPNGGHRVEVPTRISQVGDDAAGGASTFRGKGKAMNATISGPI
HLVHSERKPRDSDLFPLSDIESNGKGSADTSSSPRIISSFAATSPTYLPS
SRRRNSERSKEALQSIPREVRVSIGGGWERRSPPENNHRYSDLSVAHAPP
GLETTNAANNEKEPGGRSSWTASRTCTTALRGESTEDVRSTTRWLTPAAQ
DVALHALVCLLRAAEVDVCGHMETDTLDAGGGRVLDSDNADGGRAVLMKD
CVLLLILRTCAMFQDHDGVVKACCMLMRVGVQCSLSDGGPKGPVGGPMTP
YMVLLIEHGVEGVVTQAAMAHVGNMSVITEASALLRTLGLPPVINSTCSS
ALLRPPPPPEDSDLMAGAVMTVEAVTKAS
back to top

mRNA from alignment at L-elsbetiae_contig6420:1130..8367+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6420.15093.1 ID=mRNA_L-elsbetiae_contig6420.15093.1|Name=mRNA_L-elsbetiae_contig6420.15093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7238bp|location=Sequence derived from alignment at L-elsbetiae_contig6420:1130..8367+ (Laminarionema elsbetiae ELsaHSoW15)
CAGACGCTGGTGATAAAGACGAGAGAGAACGACAAGCGGCGGCGAAGAGA
GCACGACGACACACAGAAGACTCTGCAGGTACTAGTCTACTACACACCTT
GTATCTTGTGTGTCGTCGTAGCACCACCATTATATCTTGGAACCATTGGT
TCCTTCGGAGGGTAATATCTTCAATGATATGCACCATACAACTCTCAATA
CCGATGGGTCTTTCAGGATAGGTTTGGAATCTGTGCGCTTCTAATGTATG
TCCTCTGCATCTCGCTGGGGGCGAACTTCTACACCTCATTTAGCAAGCAC
CAAAGGTTCGTGTACGCGACAAGTTGTAGGCGTATGTTGTATGTATGTGA
TCCACGCCATGCAGGACTACAATCAATCGTCATCGAAGTTAACATATTAC
GTGTCGAGCACCTTGCTCGTTCTCAAAGGAGACTCACGTACCCTCGGTGC
TTTCGAGTTTGACCAGCGGAATGAGAGCGAGGAACGAGCTGAAGAGCGAA
TAAGTGACAGCGAGGAACAAGAGTGAGTGGTTGGTGTGTTCGAGAGCGAC
CATGCTTTTGAGGCCTATTTCGAATAAATGCAGCATATATTTCTAAAAGC
GCCACATCCTTGGATACTGCGCTATCTATCGGCTACAATTATGCTAGGAG
CGACTTGATGAGGTGAAGTTCCAGCGCGTAGAGATGGCCTCCATGCAAGC
CATTCTCCAGGACAAAGACAAATCTCTCGGCTATTTCACGTCGGAACTTC
AGAAAGTGAGTTGATGGGATGGTTGCCGGACACAGGTTGTACTCATTCGT
AGATGCGGCTGTGAACGAGGTTAAAGGTACGCAATAGATAAAACCCAAGG
CAAGAACCGCAGGAGGAAGGTGGGGCAAAAAAAATAAAATAAAAAAGAAG
AAAAAGCCCCAGTGTTCACCTCCTCCTGTGTGACCCCGGTTGGTTCTAGC
TGTACAGACACATGCACTGCAAAGTGTAGTACCTCTAAGTACACCGCAGG
GTGTAGTACACGTCTCCACTTGGGGGGACTGTCGCCAAAATAAATGGGAA
GGACACACACGCACAGTAGATAAAACCACGACTCAGACCACGCAATGCTC
TGTATTGGTTGGTAGGTGGCAGTTTACGTTTTCTGTTTTCGGGTGGGCCT
CACCGAGCGAGACAATACTTGCCTTCGCGATGAAGCAGAGGATACGCGTA
AAGTATTGATAGCTGGTGGTACTTTTTTCGATCGTGGTTGCTTCATTTCG
AAATGATCAGTAAAAAAAGCAATATGGCCGACTCCGCTCAAGTCGCCAAT
ATAACCTTTCCTCCGTGGTGAACGTTGCTGGGCAAAGCCACTATAATATC
CTTGTTGAGCAGAGTCCCGAGATAGATACATCTAAGCTGATTTTGACGCG
CGATGGCTTCCTGTACACCGTATGATCGATGGTTGCTGATTTCGTATATA
TCAGACGGTGATGAAGAACGACAAATTGCTGAAGCGACAAAAAAGGCTTG
AGCATGTCGAAGAGATGTTGGACGCGTTCCGCCGGAAGCTGATGGTTCTT
GGACGAGTCGAGGCTGGCGAAGAGGTCCGACGTAGATTTCTTAAATAAAT
TTACGTGCTTTGAACGCAGTGCGTCTAGCAAATATATCTGCCGATAGGTA
CAGGATCTTAGACGAAGAACGAAACGAACCCTTTAGGGAGATACTTCGTA
TATTGATGAACGAAGCGCAGTGTGCCAGCTTCCATTGCTAGTGGCTCAAG
AAGACAAACGACACGAAGGTAAATTGCTCGACGTGTGCACCACAAAAAAT
CGTGCATCTGCTGCAAAAGAAGGATTGCGCCAGGCGAGTCGGGCTCATTT
TCAACCCATTTCGTGAACTTGCGACCGGCTGACGAGCAGCGCCGATTCGT
GTTTAGGTAGCAGCATTCAAGTTTCAAAAATGTCTACCTCCTATATTCGG
CCCTCTAATAGAACGTTCTCTACGAACGAAGCGCGTTTCGTATCGTAACA
AGTAGTACCTGGATATATTTCCGCGGCACCGTATGAAGAAGTTGCTCGAA
ATATGTTTACTTTGTCGTAGATGCGACTGGCGGTTGCCAACAATCGTGGG
AGACAAGGAGAGGAAGACAGCGCGGCTCTTGGTCCAGATACGTGGGGGGC
GGGGAGACGTGTGCCACCTGCTGGAGGCCTCCCGGGAGTTGGACTTGTGC
CTTTGCTTATGGAGGTATGAAAAACAATTCTTGCGCGAAATCCTGCTGCC
TTGCGGCAATCGCGAAGGTCTAAATAAAGCAGAAGGTTTGACTCTAGCCC
GTTTTGATCACGGTTTGCTGGTTGTTTGATCAAAGCCATCCATGCGTAGG
GCTTCGTCAGCACAGGTCCACTACTCCAAGTTGAACACATGCGCTCTGGT
TGCCTGTTCGCCTCACGTTCCGCTGAAATGACGGTGTGTGCAGCCTTCGA
CTGATTTTTTGTCTGCAGGTCTGTCTGCAGTTCTAAATAGTGAAAAGTCG
GGAGCTTAGGTAATGTACGATGCGTTTCCCAAAGCTTGCCAACTACTCAG
TATATAACAACCAGTATTCACCCCCTTTAATGTTTTTGGTATCTTGTCGG
TCTTCCTCGTTTTTCCAAAGATATTGTTGATGACGATCTATCTCTCCTTG
TTGCCGTAGGCAATGGCTCAATTTCCAGAGAACGTGAAGCTGACTCGGGA
CGCCCTCGCCTTACTAGGGCACATTGCTAGCATGGAAAGCCTCGGACGGA
CGTTCTTAACAACCCACAGTCTCTACCATGAAGTTGTGCTGGCCTTGAGG
CGGCATGTCGGAGACGAAGTTGTCGTGGTGAGTGCACAGGGCTTCATGCT
CCCGTTTCCCCAGCTCTGCCTCGGCAAGACTTGCTTCAGGCATGACCGGG
GGGTCTTTCTAGCGAGCAAGGCTAGACTCGCCCTCAGGTGGACCGATACC
TTCTTGCTGCTGCGCGCCGCGTCGACGCGTGCGCAACGATAGAGTTGGGT
CTTAATTTGGTGCGTCAGGCACAAAATCCTGGGTACGCGGGTCTTTTTTT
GGCATCAGCGTAGGCAGCAATGTCCACCTCAGGTTTGTGCACGGAGGCAG
GCGCCACCACAAGAGGTGAAGGGACTTTACGTACACGGTCCTAGGTGACA
GAGGGAGCTGTACTGTCTTGGTAGCCTATACGCCATGGGGAAGGGCCTCG
GGGACGGCTGGCGACGAACTGATGGGGCGTAGTTGACACTCGGTGCGATA
TTAAATCATATGCCAGCACCTTGAATACAACGAGGGAGAAAGCTTGGGAA
CCGGCTGAAGAGAACAGCAACAAGAGCGTGTACGTACGGAACGAATCGAG
TGTAGCAATGTTGGGACCAGCCACAGCGGCAACCGAGCACAAGGACGACA
TCGACCCGCGGACACATCATGACATCATGCCTTCGCAATTTTCCTGTTTT
TTGTGATTGAATCTTTGTGTTAATTATTGCGATGACGTCACTCGTTTTGT
ACAGAGACGCAGCATGCCTGCGTTATTAATATTTTACCTACACCGGTATT
GCACTTATCAACGATGGTGCACCCGGTCGTGAATTGGTGACGTTACTACT
ATGTGCCTACCACACACGATTTCGAGATGGTTTGGGGTAATTGCATCGAC
TTCGGTTGTGATGGCTTTGGTGATTTGTTGTTTTTCACCGCACGTATACG
GCCCATCATTCAGACAGCACTTCAGACTTCAGACATCTCTGCGTTCGTCT
CTACTGTTGCCGCGTCTCTTTGTACAGGCAGCACTTCAGATACTAGTTTT
GCTGTCGTCGGTAACTACGCACCGGTTAGTAGTGGGAACGAGAGGGGGGG
GGGGTAGACTGCGTGTATGTAGTAGTCGAATGGAGATTTGAACGTGATGT
GGTTTAGTTGGGCACACATCAACGGTGCCGGAAATTAGGTGTTCCTCTTT
GGTATTTTGTATATCTTTCGTTTCCTGCGTGTGTTTCTTGCGGACCTTTT
GATAGCTCCAGCCCTTTTGTGACCACTGGCCGTGAAAAAGTTGCTAGATT
TTTTATTAGCAATCTCGATTATAAGAGCTAATTAGAAGAAAAAAACTCGT
CGCCACCGTTCCAAGGATAAGCGTCCTACATAGGCGTCACGGACTGTAAT
GATTCCTGAGGAGTCGATCCTCATAGGCCGGCACATAACACTATCCTCAT
CTGTTCACCATCTATGCAACCGTCCGCATCTCTGCGCTTTTCGCTCATAT
CATTGATGGCGTGATGGCAGCTTTATGGTGCGCGTCTCCTGCACAAAAGC
GCACTGCAGGGGGAGGCTATATCCCGCGACCTTCGGGCTGCGGGGGTTAT
CCCGCTCTTGGCCGAAGCCTTAGCAGCCGCCTCGTACGGCTTATCAGGAG
CTAGAAAGCCGAGGAGATTGCTGGTGAGTTAGCGGCACCTGACCGTCAGA
CGAATATTCATGCACCTACGTATGGAGATTTGTCGAATTTTCATTTTGCG
ACCATCATCTCTTTGCGCTTTTTGACTGTCTTTAGGTTTGGTAGGGATTA
CCCACGAGCCTCGTTGCACAACCTTGCTATGATTATCAGCAGATAGCTCC
ACTGGCAGGCATGGGAGGGTGCACGGTTCTTCTTGGCTGCTTGCTCTTTT
CAAAATCGAATCAAGTACCGCGGTCAAATCTTCCAACTACTACTACTACG
CGAAATTGGCCGTAACATCCGTCCGTGGCTCATCGTTTTGCCCTCCTTGC
ACGGAAACGATGCCGGAACAGTATCATGCTTTCGCGACGATTCAGCTCTG
CTACCCGGACGGTTTCTACGGCAATTCCATCCAAGCTCTCCGACTTCCCA
AGAACACCAAACCGAAACACCACAAGTCCACCAGTTCGCCGACCTGCCAC
CTCTCGACGACGGGTTTGGAGGTTGTGAGAAAAAGCAAAGCAGCAGTGGC
ATCGTTGCCGTCGGCGTCTACTGATACTGTGGCGGCGAGAAATGAGACCA
TCGGCTTGCCGGACCCAACGATACCAAGACGAAATAGCGGAATGCTCGGA
GCCAAGGCGGGAGAAGAAGCCGACCCTTGCGGCAAACCAGGGGGGAGTAT
ATATTGTCCAGCCATCCCGCACAGTAAGAGCCCTCCGAGACGGCGATGCG
GCTCATCTGTCGAAGCGACCGCTCGCGCTCCACGACTCCAGCCCTTGCCC
TCTGCGGCAAGGAGGCAGACGTGTTCGGTGGTGCGTGAAGAGGAGAACTC
AGATACCCGGCGAGGGTCTGGAAAATTGTCCCATCCGACGAACCATTCCA
TGAAACAGAGTGGTAGCAGCACGGCCGGGTGCCTATCCGAGGTAGGAGAC
GGGCACGGTTATTGGGACTGTATGGGGAGAAAAGCCGATGGTGGCGTTCA
CCACAATGGCGGCGTCAGGGCGGACGTCGATCAAAACGAGAGAGCCGTGG
CATCGGTTGTGCTGCTACGATGGGTCGTGGAATGTTTTGTGGGAAACGAG
GATGAAGGCATCGTTGGTGGCGTTCCAAATGGAGGTCATCGGGTTGAAGT
GCCCACGCGCATTAGCCAGGTGGGAGATGATGCAGCAGGTGGGGCCTCAA
CCTTTCGGGGAAAGGGAAAGGCGATGAATGCAACGATCTCGGGGCCTATT
CACTTGGTTCACTCCGAACGGAAACCCAGGGACAGTGATCTGTTTCCGCT
TTCAGACATCGAAAGCAATGGCAAAGGCAGCGCGGATACAAGCAGCAGCC
CGAGAATAATAAGTTCCTTCGCTGCAACGAGTCCTACATATCTGCCCTCT
TCGCGCAGACGTAACTCGGAGAGATCCAAAGAAGCTCTTCAATCTATTCC
TCGAGAAGTACGGGTGTCGATAGGGGGTGGTTGGGAAAGACGATCGCCCC
CAGAGAATAATCATCGATATAGCGATCTCAGCGTGGCTCATGCACCTCCT
GGACTGGAGACGACGAATGCAGCCAACAACGAAAAAGAGCCCGGAGGAAG
AAGCAGTTGGACCGCTAGCCGTACATGTACTACCGCCTTGAGGGGAGAGT
CGACGGAAGACGTCCGAAGTACGACAAGGTATGTGCTCCCAAAAGGGAGT
GTGCCGTTTTCCGTCTGTTCAACTTCTCTATAATGAGTTTCCAACACCGC
GGGATGCACTCGAGTATACACCTGACGCAGATACATATTCAAGAAGTGCT
GCCTCGGCACCAAAATGCCGCAAAATCTAGATGAGTTTTGGTGGGTTGTA
AGGGTCATATGACCCCCGTTGATTGCTAAACAGCGTCATTGCTGACGTTT
GTTTTTATCTCATCCTAAGAGGGCAAACACATCCTTTAATTTTTGAACAC
GCATGTATTCGATCAGGTGGCTAACACCGGCGGCGCAAGATGTTGCGTTG
CACGCCCTCGTGTGCTTGCTGAGAGCTGCGGAGGTCGACGTCTGTGGCCA
CATGGAAACTGACACTCTTGATGCTGGCGGCGGCAGAGTGCTGGATAGCG
ATAATGCGGACGGAGGAAGGGCAGTACTGATGAAGGATTGCGTGTTGTTG
TTGATCCTGAGAACATGCGCGATGTTTCAAGATCACGACGGGGTGGTGAA
GGCTTGCTGCATGCTGATGCGGGTCGGCGTGCAATGCTCTTTGAGCGATG
GAGGGCCCAAGGTGCGAAGTGGGCTGATGTTGATGCATCTTGTACTCCAT
CCTCTACAGTACATTTTATGTGTAGTAGTAGATGCCCTCATCATCCTCTC
CCTGCCTCTCTTCGTTGGCACTATCATCGGTCAAACGAGGACATATCAAA
TGGCCTTTAGGCCGCGCTCCCCATCCACGATCCTTATTCAACCGGTTGGG
ATTTTGGTCGCCGAAAGAACCACCCACTTCCGGTCTACGCCTGTAGAACA
CGAATAGAGTACATGTACCTTATCAGCGCGTGAAATGGCCCCCACATTTC
GTATATGCATCCACGCCCCAGCAGGGACCAGTTGGCGGACCCATGACACC
ATATATGGTTCTGTTGATCGAGCATGGTGTCGAGGGTGTGGTGACGCAGG
CAGCTATGGCGCATGTTGGCAACATGTCGGTCATCACGGAGGCGTCAGCG
CTACTACGCACGCTTGGACTGCCCCCCGTAATAAATAGTACATGTTCTTC
GGCGCTTCTTCGTCCACCACCACCACCGGAGGACAGTGATTTGATGGCTG
GAGCTGTCATGACGGTTGAGGCAGTTACAAAGGCAAGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6420:1130..8367+

>mRNA_L-elsbetiae_contig6420.15093.1 ID=mRNA_L-elsbetiae_contig6420.15093.1|Name=mRNA_L-elsbetiae_contig6420.15093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5274bp|location=Sequence derived from alignment at L-elsbetiae_contig6420:1130..8367+ (Laminarionema elsbetiae ELsaHSoW15)
CAGACGCTGGTGATAAAGACGAGAGAGAACGACAAGCGGCGGCGAAGAGA
GCACGACGACACACAGAAGACTCTGCAGCAGACGCTGGTGATAAAGACGA
GAGAGAACGACAAGCGGCGGCGAAGAGAGCACGACGACACACAGAAGACT
CTGCAGGAGCGACTTGATGAGGTGAAGTTCCAGCGCGTAGAGATGGCCTC
CATGCAAGCCATTCTCCAGGACAAAGACAAATCTCTCGGCTATTTCACGT
CGGAACTTCAGAAAGAGCGACTTGATGAGGTGAAGTTCCAGCGCGTAGAG
ATGGCCTCCATGCAAGCCATTCTCCAGGACAAAGACAAATCTCTCGGCTA
TTTCACGTCGGAACTTCAGAAAACGGTGATGAAGAACGACAAATTGCTGA
AGCGACAAAAAAGGCTTGAGCATGTCGAAGAGATGTTGGACGCGTTCCGC
CGGAAGCTGATGGTTCTTGGACGAGTCGAGGCTGGCGAAGAGACGGTGAT
GAAGAACGACAAATTGCTGAAGCGACAAAAAAGGCTTGAGCATGTCGAAG
AGATGTTGGACGCGTTCCGCCGGAAGCTGATGGTTCTTGGACGAGTCGAG
GCTGGCGAAGAGATGCGACTGGCGGTTGCCAACAATCGTGGGAGACAAGG
AGAGGAAGACAGCGCGGCTCTTGGTCCAGATACGTGGGGGGCGGGGAGAC
GTGTGCCACCTGCTGGAGGCCTCCCGGGAGTTGGACTTGTGCCTTTGCTT
ATGGAGATGCGACTGGCGGTTGCCAACAATCGTGGGAGACAAGGAGAGGA
AGACAGCGCGGCTCTTGGTCCAGATACGTGGGGGGCGGGGAGACGTGTGC
CACCTGCTGGAGGCCTCCCGGGAGTTGGACTTGTGCCTTTGCTTATGGAG
GCAATGGCTCAATTTCCAGAGAACGTGAAGCTGACTCGGGACGCCCTCGC
CTTACTAGGGCACATTGCTAGCATGGAAAGCCTCGGACGGACGTTCTTAA
CAACCCACAGTCTCTACCATGAAGTTGTGCTGGCCTTGAGGCGGCATGTC
GGAGACGAAGTTGTCGTGGCAATGGCTCAATTTCCAGAGAACGTGAAGCT
GACTCGGGACGCCCTCGCCTTACTAGGGCACATTGCTAGCATGGAAAGCC
TCGGACGGACGTTCTTAACAACCCACAGTCTCTACCATGAAGTTGTGCTG
GCCTTGAGGCGGCATGTCGGAGACGAAGTTGTCGTGCTTTATGGTGCGCG
TCTCCTGCACAAAAGCGCACTGCAGGGGGAGGCTATATCCCGCGACCTTC
GGGCTGCGGGGGTTATCCCGCTCTTGGCCGAAGCCTTAGCAGCCGCCTCG
TACGGCTTATCAGGAGCTAGAAAGCCGAGGAGATTGCTGCTTTATGGTGC
GCGTCTCCTGCACAAAAGCGCACTGCAGGGGGAGGCTATATCCCGCGACC
TTCGGGCTGCGGGGGTTATCCCGCTCTTGGCCGAAGCCTTAGCAGCCGCC
TCGTACGGCTTATCAGGAGCTAGAAAGCCGAGGAGATTGCTGTATCATGC
TTTCGCGACGATTCAGCTCTGCTACCCGGACGGTTTCTACGGCAATTCCA
TCCAAGCTCTCCGACTTCCCAAGAACACCAAACCGAAACACCACAAGTCC
ACCAGTTCGCCGACCTGCCACCTCTCGACGACGGGTTTGGAGGTTGTGAG
AAAAAGCAAAGCAGCAGTGGCATCGTTGCCGTCGGCGTCTACTGATACTG
TGGCGGCGAGAAATGAGACCATCGGCTTGCCGGACCCAACGATACCAAGA
CGAAATAGCGGAATGCTCGGAGCCAAGGCGGGAGAAGAAGCCGACCCTTG
CGGCAAACCAGGGGGGAGTATATATTGTCCAGCCATCCCGCACAGTAAGA
GCCCTCCGAGACGGCGATGCGGCTCATCTGTCGAAGCGACCGCTCGCGCT
CCACGACTCCAGCCCTTGCCCTCTGCGGCAAGGAGGCAGACGTGTTCGGT
GGTGCGTGAAGAGGAGAACTCAGATACCCGGCGAGGGTCTGGAAAATTGT
CCCATCCGACGAACCATTCCATGAAACAGAGTGGTAGCAGCACGGCCGGG
TGCCTATCCGAGGTAGGAGACGGGCACGGTTATTGGGACTGTATGGGGAG
AAAAGCCGATGGTGGCGTTCACCACAATGGCGGCGTCAGGGCGGACGTCG
ATCAAAACGAGAGAGCCGTGGCATCGGTTGTGCTGCTACGATGGGTCGTG
GAATGTTTTGTGGGAAACGAGGATGAAGGCATCGTTGGTGGCGTTCCAAA
TGGAGGTCATCGGGTTGAAGTGCCCACGCGCATTAGCCAGGTGGGAGATG
ATGCAGCAGGTGGGGCCTCAACCTTTCGGGGAAAGGGAAAGGCGATGAAT
GCAACGATCTCGGGGCCTATTCACTTGGTTCACTCCGAACGGAAACCCAG
GGACAGTGATCTGTTTCCGCTTTCAGACATCGAAAGCAATGGCAAAGGCA
GCGCGGATACAAGCAGCAGCCCGAGAATAATAAGTTCCTTCGCTGCAACG
AGTCCTACATATCTGCCCTCTTCGCGCAGACGTAACTCGGAGAGATCCAA
AGAAGCTCTTCAATCTATTCCTCGAGAAGTACGGGTGTCGATAGGGGGTG
GTTGGGAAAGACGATCGCCCCCAGAGAATAATCATCGATATAGCGATCTC
AGCGTGGCTCATGCACCTCCTGGACTGGAGACGACGAATGCAGCCAACAA
CGAAAAAGAGCCCGGAGGAAGAAGCAGTTGGACCGCTAGCCGTACATGTA
CTACCGCCTTGAGGGGAGAGTCGACGGAAGACGTCCGAAGTACGACAAGT
ATCATGCTTTCGCGACGATTCAGCTCTGCTACCCGGACGGTTTCTACGGC
AATTCCATCCAAGCTCTCCGACTTCCCAAGAACACCAAACCGAAACACCA
CAAGTCCACCAGTTCGCCGACCTGCCACCTCTCGACGACGGGTTTGGAGG
TTGTGAGAAAAAGCAAAGCAGCAGTGGCATCGTTGCCGTCGGCGTCTACT
GATACTGTGGCGGCGAGAAATGAGACCATCGGCTTGCCGGACCCAACGAT
ACCAAGACGAAATAGCGGAATGCTCGGAGCCAAGGCGGGAGAAGAAGCCG
ACCCTTGCGGCAAACCAGGGGGGAGTATATATTGTCCAGCCATCCCGCAC
AGTAAGAGCCCTCCGAGACGGCGATGCGGCTCATCTGTCGAAGCGACCGC
TCGCGCTCCACGACTCCAGCCCTTGCCCTCTGCGGCAAGGAGGCAGACGT
GTTCGGTGGTGCGTGAAGAGGAGAACTCAGATACCCGGCGAGGGTCTGGA
AAATTGTCCCATCCGACGAACCATTCCATGAAACAGAGTGGTAGCAGCAC
GGCCGGGTGCCTATCCGAGGTAGGAGACGGGCACGGTTATTGGGACTGTA
TGGGGAGAAAAGCCGATGGTGGCGTTCACCACAATGGCGGCGTCAGGGCG
GACGTCGATCAAAACGAGAGAGCCGTGGCATCGGTTGTGCTGCTACGATG
GGTCGTGGAATGTTTTGTGGGAAACGAGGATGAAGGCATCGTTGGTGGCG
TTCCAAATGGAGGTCATCGGGTTGAAGTGCCCACGCGCATTAGCCAGGTG
GGAGATGATGCAGCAGGTGGGGCCTCAACCTTTCGGGGAAAGGGAAAGGC
GATGAATGCAACGATCTCGGGGCCTATTCACTTGGTTCACTCCGAACGGA
AACCCAGGGACAGTGATCTGTTTCCGCTTTCAGACATCGAAAGCAATGGC
AAAGGCAGCGCGGATACAAGCAGCAGCCCGAGAATAATAAGTTCCTTCGC
TGCAACGAGTCCTACATATCTGCCCTCTTCGCGCAGACGTAACTCGGAGA
GATCCAAAGAAGCTCTTCAATCTATTCCTCGAGAAGTACGGGTGTCGATA
GGGGGTGGTTGGGAAAGACGATCGCCCCCAGAGAATAATCATCGATATAG
CGATCTCAGCGTGGCTCATGCACCTCCTGGACTGGAGACGACGAATGCAG
CCAACAACGAAAAAGAGCCCGGAGGAAGAAGCAGTTGGACCGCTAGCCGT
ACATGTACTACCGCCTTGAGGGGAGAGTCGACGGAAGACGTCCGAAGTAC
GACAAGGTGGCTAACACCGGCGGCGCAAGATGTTGCGTTGCACGCCCTCG
TGTGCTTGCTGAGAGCTGCGGAGGTCGACGTCTGTGGCCACATGGAAACT
GACACTCTTGATGCTGGCGGCGGCAGAGTGCTGGATAGCGATAATGCGGA
CGGAGGAAGGGCAGTACTGATGAAGGATTGCGTGTTGTTGTTGATCCTGA
GAACATGCGCGATGTTTCAAGATCACGACGGGGTGGTGAAGGCTTGCTGC
ATGCTGATGCGGGTCGGCGTGCAATGCTCTTTGAGCGATGGAGGGCCCAA
GGTGGCTAACACCGGCGGCGCAAGATGTTGCGTTGCACGCCCTCGTGTGC
TTGCTGAGAGCTGCGGAGGTCGACGTCTGTGGCCACATGGAAACTGACAC
TCTTGATGCTGGCGGCGGCAGAGTGCTGGATAGCGATAATGCGGACGGAG
GAAGGGCAGTACTGATGAAGGATTGCGTGTTGTTGTTGATCCTGAGAACA
TGCGCGATGTTTCAAGATCACGACGGGGTGGTGAAGGCTTGCTGCATGCT
GATGCGGGTCGGCGTGCAATGCTCTTTGAGCGATGGAGGGCCCAAGGGAC
CAGTTGGCGGACCCATGACACCATATATGGTTCTGTTGATCGAGCATGGT
GTCGAGGGTGTGGTGACGCAGGCAGCTATGGCGCATGTTGGCAACATGTC
GGTCATCACGGAGGCGTCAGCGCTACTACGCACGCTTGGACTGCCCCCCG
TAATAAATAGTACATGTTCTTCGGCGCTTCTTCGTCCACCACCACCACCG
GAGGACAGTGATTTGATGGCTGGAGCTGTCATGACGGTTGAGGCAGTTAC
AAAGGCAAGTGGACCAGTTGGCGGACCCATGACACCATATATGGTTCTGT
TGATCGAGCATGGTGTCGAGGGTGTGGTGACGCAGGCAGCTATGGCGCAT
GTTGGCAACATGTCGGTCATCACGGAGGCGTCAGCGCTACTACGCACGCT
TGGACTGCCCCCCGTAATAAATAGTACATGTTCTTCGGCGCTTCTTCGTC
CACCACCACCACCGGAGGACAGTGATTTGATGGCTGGAGCTGTCATGACG
GTTGAGGCAGTTACAAAGGCAAGT
back to top