prot_L-elsbetiae_contig641.15087.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig641.15087.1
Unique Nameprot_L-elsbetiae_contig641.15087.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length844
Homology
BLAST of mRNA_L-elsbetiae_contig641.15087.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI)

HSP 1 Score: 471 bits (1212), Expect = 1.560e-140
Identity = 391/915 (42.73%), Postives = 470/915 (51.37%), Query Frame = 0
Query:   18 DATASRRRELRTTAGRADIARTVLRLKA--------NAAVATAAXXXXXXXXXXXXXXXXXXXXXXXXXAAGGTIT-------PA---------------------------AADRSAEKERKA-LADQGVQLFDLFDADGSGTIDREELHSLLEQLGIWVSAKTAREVFPRLDLDCSGDVRQEKLVAWLKDDGVASRRTPLSRMLQTRQSVQALGSSSRRLEHQVRASMLSRSRATARAEAWALLSGVPTTPXXXXXXXXXXXXXXXXGLAGPAGCHXXXXXXXXXXXXXXXXXXXXXXXXXXTRQRGSEEPTRDAGEATGAVGAAT------------GGRKRGRALAARAAERRRRTGEREKEVERELLAKRAEVEAEQRVRRNWRTQAGAAELRREVDRIRGAGEAMKLKLRTWDVDV----HTPAATLSPLTLRR--RQEEEKLRHLFRLFHASCDGCIDAEELGRLLSRMDVRLSEPEVAALLQKMDGDGSGDVDFVEFSEWWHTTGREWSTRPAALVRSAASSLAATVAPMAAARRDAXXALVSSXXXXXXXEVKAALRLEDENEAVCLLASSSSAXXXXXXXXXAAGS------ANVTGAVGDASSAAQGSLAAASIFGGTQGASG-----GDDGWGRPSP-NAERTAAARASKLARAEAEAYADVQATLRTDAGKRELARRTRAVRLEWQAAVKSAGRIAR----------GNRPRLAAGPGRDKPGERKRRRHAADASTTT------LVEFPFLQLLWGVHGSTTRGATGXXXXXXXXXXXXXXAGDGSAVEVEPSELKFLGASLRQTLVGQVTRRVPGGEQAAILGSTLALGRTVRASSASSVGGSRGPPLRAAREVRPSPAAAPHVANAAPAPATGGGEVLSMSGIFAGDSGDEIQSLKTLTR 843
            DA A+RRR  +T  GRA+IAR V RLKA        N   A A                          AA G ++       PA                           A DR  E+E+++ L  Q  QLF LFDADGSG IDREEL  LL QLGIWV+AK A                    V WL+++G   RR PLS+ML+  QSV+A GSS+RRLE QVRAS+++RSRA ARAE WA  SGV   P                  A PA                            X      EE  +   E   AV AAT            GG++RGR LA RA  RRRR  E E++ EREL+ KRAE  AE+R++R WRTQAGAAEL+RE DRIRGA EA+ L LR WD  V         T +  +  R  ++ EEKLRH+FRLF  SCDGCI AEELGRLLSRM+V +SE E+  LL +MD DGSGDVDF EFS WWH  G + S RPAAL+RSAASSL A VAP+ AARRDA  AL+S        EVK  LRLEDE+E    LA  ++          AAG         V    G  SSA  G      +  GT+G  G     G+ G GR    NA+R AAAR+SKLARAEAEAYADVQA + T AGKRELARRTR +RLEW AA+++A  IAR          G+      G   DK  +R +R+     +T+T      LVE P L+ LWG+H ST  G T                  G++  VEPSELK++GASLR TLVG   RR+  G Q  +LGSTLA G   R ++        G P +A  E          + NAA       G+ LS+S IF   + DEI+ LKTLTR
Sbjct: 1596 DAAAARRRAFQTPTGRAEIARAVRRLKASRVIAATSNTVAAAAEAGGEAPQTNTAQGTHEERQTVVTQVAAAGAVSEGATWGAPANAGLSEDAGAKHTASVAKLSTSLNVAGAVDRVEEREKRSPLVGQAEQLFQLFDADGSGAIDREELAPLLGQLGIWVTAKMASXXXXXXXXXXXXXXXXXXXVTWLENEGADLRRAPLSKMLRAGQSVKAGGSSTRRLESQVRASIVARSRAAARAEVWAS-SGVTPVPA-----------------AAPAVVATTASTAAIDGPHEQAKQEDPNPQKQXXXXXXGEEEKKVIDEDAVAVEAATARKEPALAVKVTGGKERGRVLATRATGRRRRFEEEERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIRGAEEALNLTLRAWDAGVSFAKEEAGVTKTDASALRETKRAEEKLRHMFRLFDVSCDGCIHAEELGRLLSRMNVPMSEAEIVGLLHEMDRDGSGDVDFCEFSAWWHKDGLKRSNRPAALIRSAASSLVAKVAPITAARRDARRALISRARAEARAEVKNVLRLEDEDEEALRLAKIATGNTASAVAADAAGEYFVAFETRVGRECGGTSSAPPGKPL---LKDGTEGLGGEGSGVGEGGEGRGDRLNAKRLAAARSSKLARAEAEAYADVQAMILTQAGKRELARRTRDLRLEWSAAIRTATSIARESGSGELGTAGSADYSYEGASHDKEEQRTQRKEQRQHATSTDTSGIPLVEAPILRFLWGLHRSTAAGVT--------------LETAGASAGVEPSELKYVGASLRSTLVGGANRRI-WGSQVTLLGSTLAKGTAGRTANIVRTSADFGLPPQAEEEAT--------LPNAARTAGVESGDALSLSTIFDDHAHDEIRDLKTLTR 2466          
BLAST of mRNA_L-elsbetiae_contig641.15087.1 vs. uniprot
Match: UPI001C71537F (troponin C-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI001C71537F)

HSP 1 Score: 57.8 bits (138), Expect = 4.070e-6
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0
Query:  389 ATLSPLTLRRRQEE---EKLRHLFRLFHASCDGCIDAEELGRLLSRMDVRLSEPEVAALLQKMDGDGSGDVDFVEFSE 463
            A L+   L    EE   ++L+  FR +   C+G ID  +L  +L  +D RLSE ++ A+++++D DGSG +DF EF E
Sbjct:   69 AELAAKFLMEEDEEALKKELKEAFRFYDKECNGYIDNSKLREILQELDPRLSEDDLDAIIEEVDSDGSGTLDFDEFME 146          
BLAST of mRNA_L-elsbetiae_contig641.15087.1 vs. uniprot
Match: A0A818VH62_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A818VH62_9BILA)

HSP 1 Score: 55.1 bits (131), Expect = 3.220e-5
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0
Query:  399 RQEEEKLRHLFRLFHASCDGCIDAEELGRLLSRMDVRLSEPEVAALLQKMDGDGSGDVDFVEF 461
            R +E++LR  F LF  +  G I  +EL ++L  + ++ +E E+ AL+ +MD DGSG +DF EF
Sbjct:    6 RNQEQQLRDAFDLFDRNRSGDISKKELKKVLKTLGIKANEKELQALINQMDADGSGKIDFNEF 68          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig641.15087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G286_ECTSI1.560e-14042.73Centrin-1, putative n=1 Tax=Ectocarpus siliculosus... [more]
UPI001C71537F4.070e-638.46troponin C-like n=3 Tax=Penaeus TaxID=133894 RepID... [more]
A0A818VH62_9BILA3.220e-541.27Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..282
NoneNo IPR availableGENE3D1.10.238.10coord: 388..491
e-value: 5.4E-16
score: 60.6
NoneNo IPR availableGENE3D1.10.238.10coord: 26..169
e-value: 6.1E-15
score: 57.6
NoneNo IPR availablePANTHERPTHR10891:SF703CALCIUM-BINDING PROTEIN CML25-RELATEDcoord: 94..158
coord: 254..510
IPR002048EF-hand domainSMARTSM00054efh_1coord: 404..432
e-value: 0.26
score: 20.4
coord: 139..167
e-value: 150.0
score: 0.2
coord: 440..468
e-value: 1.3
score: 16.8
coord: 103..131
e-value: 0.0091
score: 25.2
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 106..131
e-value: 1.3E-5
score: 24.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 402..464
e-value: 7.7E-8
score: 32.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 135..170
score: 7.037
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 436..471
score: 10.748
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 400..435
score: 10.134
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 99..134
score: 12.951
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 94..158
coord: 254..510
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 449..461
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 112..124
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 105..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig641contigL-elsbetiae_contig641:26532..35045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig641.15087.1mRNA_L-elsbetiae_contig641.15087.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig641 26288..35045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig641.15087.1 ID=prot_L-elsbetiae_contig641.15087.1|Name=mRNA_L-elsbetiae_contig641.15087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=844bp
MKHKALPAPPPPYPPQADATASRRRELRTTAGRADIARTVLRLKANAAVA
TAAAATKVEAEAETAAEAMKAETSATTAAAGGTITPAAADRSAEKERKAL
ADQGVQLFDLFDADGSGTIDREELHSLLEQLGIWVSAKTAREVFPRLDLD
CSGDVRQEKLVAWLKDDGVASRRTPLSRMLQTRQSVQALGSSSRRLEHQV
RASMLSRSRATARAEAWALLSGVPTTPPSKSPPSAAAAAAAADGLAGPAG
CHQQQQQQQQQQQQQQQQQQQQQQQQQETRQRGSEEPTRDAGEATGAVGA
ATGGRKRGRALAARAAERRRRTGEREKEVERELLAKRAEVEAEQRVRRNW
RTQAGAAELRREVDRIRGAGEAMKLKLRTWDVDVHTPAATLSPLTLRRRQ
EEEKLRHLFRLFHASCDGCIDAEELGRLLSRMDVRLSEPEVAALLQKMDG
DGSGDVDFVEFSEWWHTTGREWSTRPAALVRSAASSLAATVAPMAAARRD
ARRALVSSARSQARAEVKAALRLEDENEAVCLLASSSSAAAATAASATAA
GSANVTGAVGDASSAAQGSLAAASIFGGTQGASGGDDGWGRPSPNAERTA
AARASKLARAEAEAYADVQATLRTDAGKRELARRTRAVRLEWQAAVKSAG
RIARGNRPRLAAGPGRDKPGERKRRRHAADASTTTLVEFPFLQLLWGVHG
STTRGATGATGVAGAADAAGAAAGDGSAVEVEPSELKFLGASLRQTLVGQ
VTRRVPGGEQAAILGSTLALGRTVRASSASSVGGSRGPPLRAAREVRPSP
AAAPHVANAAPAPATGGGEVLSMSGIFAGDSGDEIQSLKTLTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR039647EF_hand_pair_protein_CML-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair