prot_L-elsbetiae_contig641.15086.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig641.15086.1
Unique Nameprot_L-elsbetiae_contig641.15086.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1254
Homology
BLAST of mRNA_L-elsbetiae_contig641.15086.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI)

HSP 1 Score: 867 bits (2241), Expect = 1.950e-276
Identity = 693/1381 (50.18%), Postives = 782/1381 (56.63%), Query Frame = 0
Query:    1 MEDQVSASLLGAVPKEFCRDAPPAA-------------IEAMEMGQDNQDRSPDNRTVGR-----GFNASATIVERSQINS----APTDGGGSFATALQFNNCRSTLPRSPRLRQRLQEQQKSPSYKQQRGAPIAVISAGDEKGTGDRNRQERSRRRLAAFLEKKAALSEAPLSAPVPAVDHGVGRYTTSPSNXXXXXXXINNTDQELFGLGGDALASAAPSESMTANFIGLLERSLGRGVWADPVASQLARPLNAILAYLPPEGARLHAESGLEFQPLGCHGGPAPLESPLLPAEEIRIATTSGPVTGAPSGTGGAGG---NGAATAPGGVGRGRTLAAPEKDGVPASSGLPLLTVTMENGAAEEAPSAVWLGRVAAVMEARGDRDEAVRLYGEAAAVLTGVDRNCHIGAAVDGSSHRVGGVGAGMPTAMG-GR-----GGGGGCSGGVGMNNLFPYSARAHYLASMIERNYRRHFNRRAAAQTRAGATFRGHLARAGARRDRICRVSAATFVARAWRRRMHRLNVATGKLQAVVRGADARRRVKELRIAIRNAITAQSGVRMFLAKRTARRLRLEVASAGLLQALQRGFALRRVRAAAISEIHGKLWQAALGLNRVARGFLHRRFAGMVRQFAMDEEIERSEAEASVVGRAGRLAVTRVDIYLTTDAGKAELAQETRRAKAAAARASILMRGASPEKRRRASARGVFGSFDLDGSGTIDKTELQPLLGALGMSVTDAELK--------------------------------------------------------------------------------------------------AHRSVRAATGMALKERARRGVVRRWVASVARQAQVRFREDRPPALECCVCHQAFRLYGEYWRHFGGGRCEWHRRRRAERQWARLLDERRCLEVAGIRAEAAEEARIASKGSTGARELSALGLRVHTVILAELKSGLGTASEERKPGGVPSTEEARSAVARSAFQAFDRDGNGSLDVSDLADLLGVLKGIPKRPTSAGPGTGASVGAAATGLGLEAAMDAMDEDQSGQIDIGEFMSWFDGCGFRSGGAAEVTPASSSGDWPQ---EAGARLHVKVRSSLAGGDVGGAPRQRAGGRTEQGKEEGDYIDAHSTETGSXXXXXXXXXXXXXXXXDSSRGSAPPSVTDRDGAEKTKSQKGRAXXXXXXXGEEGRGGVFGMGALWRRTKTTGGKAAPATDEPNGHTSAKCKRSDEKKPTQQNQRSETASRLGAFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDESLTPPHPPSASDAPAETPCGRRAFFSPARFLQQRSLRRAASADPWKRHRKTLRAVAEREARTLLLRRARLRAQASSLAR 1249
            +E++VS SLLG VP+EFCRDAPPA              + A     ++ + + D    GR        +SAT   R   +S    A T GG              T    P      Q+QQ +   K+QRG               +R   ERSRRRLAAFLE +                         P +           DQ  FGLGGDAL    PSESMTANF+GLLE SLG GVW DPVASQLARPLNA+LAYLPPEGARL  ESG  F P    GG    E+ L P  E   A  + P  G    T        +G   AP G GRG T         P ++   LLTVTME G AEEAP AVWLG+VAAVMEARGDRDEAVRLYGEAAA LTG       GA+  GS    GG  +  P A G GR     GG  G   G G + LFPYSARAHYLAS+IER YRRHF RR AAQT A A FRGHLAR GAR+D+  R SAATFVARAWRRRM+RL +AT K QA++RGA  RR+ +E+RI IR+ I+AQS VRMFLAKRT +R+RLE ASAGLLQAL RGF LRRVRA AISEIH  LW+AALGLNRVARGFLHRRFAGMVRQFA+D EI R EAEA+ VG A RLA TR D+YLTTDAGK ELAQE RRAKAA  R  ILMRGASPE+RRRASA  VF SFDLDGSGTID TEL+ LLGALG+ +T+AELK                                                                                                  A R++RAATGMAL++RARR V+RRWV+  AR+AQVRFRE  PP LEC  CHQAF LYG+YWRHFGGGR E HRRR AERQWARLLDER  L  AG+RAEAAEEARIA KGS GA E +ALG R+   + ++LK G G +    +   VP+TEEA + VAR AFQAFDRDGNG LDVSDLADLLGVL+ I  RP SA    G+  GAAA G GLEAAM AMDED SGQ+DI EFM WF+G     G      P    G+ PQ   E+   L+VKV          G      GG   Q   E +           XXXXXXXXXXXXXXXX  S      +V  R   +  KS K               GGVF + A W + K      APAT   NG    + KR          +             XXXXXXXXXXXXXXXXXXXX         GD S   P   SA+ + AET   R A FSP R L  R    +++ADPWKRH KTLRAVAE+EARTLLLRRARLRAQ   LAR
Sbjct:  118 IEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSSSLKAVTVAAGARATNSAEDAADGAGSGRRPIKIAVESSATTGSRDVSSSLAAPAATGGGDCVVAGAAHQRGLPTKASGPPYSD--QQQQHASRPKRQRGXXXXXXXXXXX----ERRNGERSRRRLAAFLEDQXXXXXXXXXXXXXXXXXXRAEEG-QPCDGSNSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTP---PGGSHEAEANLPPDNEPSAAHATSP-DGRKKKTAXXXXXTTSGIKAAPTGAGRGPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKRE----GASRIGSRDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGAGPD-LFPYSARAHYLASIIERTYRRHFLRRTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISAQSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVGITNAELKVTSAAVDADGSGEISFSEFYAWFGGGGFHGGGDYGVGEALGFRGMTSDTSENWSLRSSPSLSTARSGMEESTAALTSGYRSAEGNGGPRHTARATFVKARRNLRAATGMALQDRARRSVIRRWVSLAAREAQVRFREAWPPTLECWACHQAFALYGDYWRHFGGGREEQHRRRGAERQWARLLDERSRLAAAGLRAEAAEEARIAPKGSAGAHEHAALGARLLAALSSDLKRGGGKSGSSEEEA-VPTTEEATATVARLAFQAFDRDGNGELDVSDLADLLGVLRRIAGRPPSARTALGS--GAAAAGYGLEAAMFAMDEDHSGQVDIDEFMRWFNGYDAHDGANRSTAP----GELPQRGRESEEPLYVKVL---------GVRNGATGGTNAQEDREANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTADEDDTVGARASGD-PKSAKNEKRPAA--------GGVFRVRA-WLKRK------APATT--NGSQRKQTKR----------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSVGGSNTGDGSFASPS--SANRSVAETRA-RGAPFSPRRLLGDRWS--SSTADPWKRHAKTLRAVAEQEARTLLLRRARLRAQVHELAR 1433          
BLAST of mRNA_L-elsbetiae_contig641.15086.1 vs. uniprot
Match: A0A835ZFC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.160e-12
Identity = 102/357 (28.57%), Postives = 140/357 (39.22%), Query Frame = 0
Query:  424 LFPYSARAHYLASMIERNYRRHFNRRAAAQTRAGATFRGHLARAGARRDRICRVSAATFVARAWR---------------------------RRMHRLNVATGKLQAVVRGADARRRVKELRIAIRNAITAQSGVRMFLAKRTARRLRLEVASAGLLQALQRGFALRRVRAAAISEIHGKLWQAALGLNRVARGFLHRRFAGMVRQ-----------------------------FAMDEEIERSEAEASVVGRAGRLAVTRVDIYLTTDAGKAELAQETRRAKAAAARASILMRGASPE--------KRRRASARGVFGSFDLDGSGTIDKTELQPLL--GAL--GMSVTDAELKA 712
            LFPY+ RAH+ A+ ++R  RR   R+AAA T   A  RGHL R   RR R  R + AT + + W                            R   + +VA   +Q++ RGA  R RV+ LR AI  A   Q   R  L +                 AL RG+  RR           +LW+AA  +    RG L RR+A ++R+                               +  E  R+  EA  V  A   A+ +  +   T  G+ EL  E  R          L++GA  +         R R  AR VF + DL G G +   EL+ LL  GAL  G    DA+L+A
Sbjct:  118 LFPYAPRAHFAAAQLQRACRRRLQRKAAAATAVAAGLRGHLVRRKRRRARAVREAGATRIQKLWASLDPPLTPLCVRHRXXXXXXXXXXXXXRYQRKRHVAATAIQSLARGARDRARVRWLRAAIAAAARVQRTWRGCLGRXXXXXXXXXXXXXXXXXALARGYGTRRAXXXXXXXXQSQLWRAAARVAVAWRGRLCRRYAALLRRQEHLRMKAPRLPTPMLTLKLATRASSSRATQLAAEARRARDEAQHVRGAIAAALAKQRLRFDTPEGRQELTTELERQTVR----ETLLKGAWEKLDGAAVAAARARFRARAVFDALDLSGGGRVGARELRELLRGGALLQGYVGIDAQLRA 470          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig641.15086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G286_ECTSI1.950e-27650.18Centrin-1, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZFC5_9STRA1.160e-1228.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1223..1243
NoneNo IPR availableGENE3D1.10.238.10coord: 828..951
e-value: 5.0E-11
score: 44.8
coord: 598..714
e-value: 8.4E-9
score: 37.5
NoneNo IPR availableGENE3D1.20.5.190coord: 491..550
e-value: 3.4E-5
score: 25.4
IPR002048EF-hand domainSMARTSM00054efh_1coord: 923..951
e-value: 0.58
score: 19.2
coord: 673..701
e-value: 1.5
score: 16.4
coord: 869..897
e-value: 0.29
score: 20.2
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 924..945
e-value: 0.15
score: 11.6
coord: 873..893
e-value: 0.016
score: 14.7
coord: 677..695
e-value: 0.0023
score: 17.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 865..900
score: 12.003
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 669..704
score: 10.887
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 919..954
score: 10.72
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 493..515
e-value: 9.3
score: 13.9
coord: 519..541
e-value: 7.9
score: 14.5
coord: 448..470
e-value: 80.0
score: 6.2
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 494..523
score: 8.004
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 449..478
score: 6.998
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 646..945
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 932..944
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 878..890
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 682..694
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 675..948

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig641contigL-elsbetiae_contig641:11471..23885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig641.15086.1mRNA_L-elsbetiae_contig641.15086.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig641 9395..35042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig641.15086.1 ID=prot_L-elsbetiae_contig641.15086.1|Name=mRNA_L-elsbetiae_contig641.15086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1254bp
MEDQVSASLLGAVPKEFCRDAPPAAIEAMEMGQDNQDRSPDNRTVGRGFN
ASATIVERSQINSAPTDGGGSFATALQFNNCRSTLPRSPRLRQRLQEQQK
SPSYKQQRGAPIAVISAGDEKGTGDRNRQERSRRRLAAFLEKKAALSEAP
LSAPVPAVDHGVGRYTTSPSNSNSNSNSINNTDQELFGLGGDALASAAPS
ESMTANFIGLLERSLGRGVWADPVASQLARPLNAILAYLPPEGARLHAES
GLEFQPLGCHGGPAPLESPLLPAEEIRIATTSGPVTGAPSGTGGAGGNGA
ATAPGGVGRGRTLAAPEKDGVPASSGLPLLTVTMENGAAEEAPSAVWLGR
VAAVMEARGDRDEAVRLYGEAAAVLTGVDRNCHIGAAVDGSSHRVGGVGA
GMPTAMGGRGGGGGCSGGVGMNNLFPYSARAHYLASMIERNYRRHFNRRA
AAQTRAGATFRGHLARAGARRDRICRVSAATFVARAWRRRMHRLNVATGK
LQAVVRGADARRRVKELRIAIRNAITAQSGVRMFLAKRTARRLRLEVASA
GLLQALQRGFALRRVRAAAISEIHGKLWQAALGLNRVARGFLHRRFAGMV
RQFAMDEEIERSEAEASVVGRAGRLAVTRVDIYLTTDAGKAELAQETRRA
KAAAARASILMRGASPEKRRRASARGVFGSFDLDGSGTIDKTELQPLLGA
LGMSVTDAELKAHRSVRAATGMALKERARRGVVRRWVASVARQAQVRFRE
DRPPALECCVCHQAFRLYGEYWRHFGGGRCEWHRRRRAERQWARLLDERR
CLEVAGIRAEAAEEARIASKGSTGARELSALGLRVHTVILAELKSGLGTA
SEERKPGGVPSTEEARSAVARSAFQAFDRDGNGSLDVSDLADLLGVLKGI
PKRPTSAGPGTGASVGAAATGLGLEAAMDAMDEDQSGQIDIGEFMSWFDG
CGFRSGGAAEVTPASSSGDWPQEAGARLHVKVRSSLAGGDVGGAPRQRAG
GRTEQGKEEGDYIDAHSTETGSGGSSGSGSGSGSGSWSDSSRGSAPPSVT
DRDGAEKTKSQKGRAAGGGGGRGEEGRGGVFGMGALWRRTKTTGGKAAPA
TDEPNGHTSAKCKRSDEKKPTQQNQRSETASRLGAFGSAGGGEGGEAKRR
RHRRSADSSSSSSSSSTGDESLTPPHPPSASDAPAETPCGRRAFFSPARF
LQQRSLRRAASADPWKRHRKTLRAVAEREARTLLLRRARLRAQASSLARL
GRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR000048IQ_motif_EF-hand-BS
IPR039647EF_hand_pair_protein_CML-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair