mRNA_L-elsbetiae_contig6406.15083.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: D7FSR2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR2_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 3.640e-167 Identity = 440/781 (56.34%), Postives = 483/781 (61.84%), Query Frame = 1
Query: 1 MRAYSPPVTRQRARAIILSEAAQRDQRGQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPRELLDGRGRAG----------GKDPK---GGKRGGGLSSREADARPKPAATVGNSVGRWRRGGGHKKSGDGQGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALSAACSQPLEEVNPSILNASSFSPGGGXXXXXXXGS-GKEEGRTPPAPAVSSQVSPSRPE---EVDGGGSPATVGGDGLRVTEGSMTSGGAAGASAVP-PGSLAMSGGS----EXXXXXXXXXXALPTPP-ARGVDAAPEGVG-AVTDRR-----AAAXXXXXXXXXXXXXXXXSAIAGSPARGVRPPTAGAGGXXXXXXGGALEDPGSRLKGKSVEAKGSTGVSPMPKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGEFEPSPNAEEEMRAVLAASGGGGDWADLYSAVDSARRLCIFHAE-VVVRATAGXXXXXXX-------SNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDIHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLGVGAKAGVGLPEGMEPGGLVAGMSRALNGKVAEGRASARRALLRSRKAMGLGAFEAAVAESLEKAEASALLAALATPKRAGAGXXXXXXXXXGRAPVLHGRGGGAAGPXXXGRGAARPSIREQM 2232
MRAYSPPVTRQRARAIIL +AAQR XXXXXXXXXXXXXXX X + L +G G G G+ + GG G SSR A R + ATVGN+ RWRRGGG + XXXXXXXXXXXXX XX ++ SQPLEEVNPS+LNA FS G G+ GKE G + + A SS P RP + + GG PA +GG R+ GS T+G AVP P +L+ G + LP PP ARG A GV AV DRR A XXXXXXXXX + GSP RGV+PP A A XXXXXX G GSRL GKSV AKGSTGVSPM KRNRRELKLSEEETAMAGAPQGPVYQVAVLETG+FEPSPN +EEM+AV AAS G GDWADLYSAVDSARRLCIFHA+ ++V G XXXXXX NLEG+V LLA AVGNLRSSMVRNALLGV D+F FLKHDVGRVDI PM+AGTLQRLAGDKRFICQTAAQAMEAAAR GP VLHAILPSLDDRNAEVA+KSAF++EQCLA LGVG+KAGVGLPE +E ++ GMSRALNGKVAEGRASARRALLR RKAMGLG FEAAV SLEKAEA++LL LATP R GA GRAP+L GR GGA G G AARPSIREQM
Sbjct: 1 MRAYSPPVTRQRARAIILGQAAQRS--------XXXXXXXXXXXXXXXGSRSXSRSSGGRVRRREQEQGASESLPNGAGAGGTGGGAEESDGGRSERVASGGSPGSFSSSRTAGTRSESTATVGNTASRWRRGGGRRNP-------------SVEAEVEITKGLXXXXXXXXXXXXXVXXAEATCGLGDQGVDADGDDGVASSSVAAAFPGAPRSSXXXXXSQPLEEVNPSVLNAKDFSSGSSSSGGVDAGADGKEGGSSVASTAPSSHHEPPRPSSQSDREDGGRPA-IGGP--RLLGGSTTAG------AVPLPAALSGDGADGAAVDGDADSPNHGGVLPIPPPARGPSATAAGVARAVADRRDRSSSGGAVRGRSCAXXXXXXXXXGDMDGSPERGVKPPAAEAEXXXXXXXAGL----GSRLNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAASAGDGDWADLYSAVDSARRLCIFHAQKLLVPGGQGGXXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDIFRFLKHDVGRVDISPMIAGTLQRLAGDKRFICQTAAQAMEAAARNGPGADVLHAILPSLDDRNAEVAAKSAFYAEQCLAALGVGSKAGVGLPEALEFRSMLPGMSRALNGKVAEGRASARRALLRCRKAMGLGPFEAAVKSSLEKAEATSLLTVLATPNRTGAAAGAGKAGP-GRAPILQGRRGGA-GTGRGGGVAARPSIREQM 745
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A835YTH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH4_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.430e-26 Identity = 111/318 (34.91%), Postives = 152/318 (47.80%), Query Frame = 1
Query: 1216 KGSTGVSPMPKRNRR---ELKLSEEETAMAGAPQGPVYQVAVLETGEFEPSPNAEEEMRAVLAASGGGG------DWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDI-----------HPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATL----------------------------GVGAKAGVGLPEGMEPGGLVAGMSRALNGKVAEGRASARRALLRSRKAMGLGAFE 2025
KGS G +R RR ELKLS EE+ M GAP GPVYQV VLET F+ SP+A EE+R +L DWA+ YSA+DSARR+ I H + ++ A A L ++ L+ V + RSS+ RNAL + +V + RVD H + A + DK+FI AA + AR + +L A+LP +NA A K+A +++ CLATL + G P G+E G + + RA +GK EG+A+A AL R R+A+G AFE
Sbjct: 258 KGSLGGGSGHRRARRAGVELKLSAEESRMKGAPVGPVYQVDVLETEHFDVSPDAAEELRLLLXXXXXXXXXXRREDWAEQYSAIDSARRMAIHH-QALLHAPAA---------LPAVLELVRQGVLSARSSLSRNALKALREVLT-------RVDAAALAAAAAPLAHAVAAAAARCGCADKKFIADEAAATLADGARGAAAALLLRALLPCTAGKNALAAGKAAVYADACLATLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXTESDGGAAWPAGLEAGPTLTALWRAHSGKSVEGKAAALAALRRCRRALGDEAFE 558
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A7S3XLY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLY7_HETAK) HSP 1 Score: 112 bits (281), Expect = 6.680e-24 Identity = 83/228 (36.40%), Postives = 123/228 (53.95%), Query Frame = 1
Query: 1192 LKGKSVEAKGSTGVSPMPKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGEFEPSPNAEEEMRAVLAASGGGG---DWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDIHPMVAGTLQRL-----AGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCL 1851
L+ S++A ++ S + KR +R LKLS EE AMAGAP+G VYQV VLE + P +++++ VL A+G DW D Y+AVD+ RRL I + ++ A L + L G+LRSSM RN+LL + D+F F+ G V P VA TL L GDK+F+ TA ++A AR P + A + +D+N EV +++ +++ L
Sbjct: 50 LESVSLKALQASSPSILNKR-KRALKLSREEQAMAGAPEGNVYQVEVLERKDVPPPEAPQDDLQLVLLAAGPSAATLDWGDTYAAVDALRRLAIHSPQTLLNGGAAV--------LAAALQLTKEGAGSLRSSMARNSLLALEDLFDFVG---GPVLGEPEVATTLVSLLLGLAGGDKKFLRGTAQSTVDALARAAPGADTVAAFVAHAEDKNTEVQAQALLRADKAL 265
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A7S3UTF7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTF7_HETAK) HSP 1 Score: 73.2 bits (178), Expect = 4.920e-11 Identity = 55/163 (33.74%), Postives = 81/163 (49.69%), Query Frame = 1
Query: 1387 VLAASGGGG---DWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDIHPMVAGTLQRL-----AGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCL 1851
VL A+G DW D Y+AVD+ RRL I + ++ A L + L G+LRSSM RN+LL + D+F F+ G V P VA TL L GDK+F+ TA ++A AR P + A + +D+N EV +++ +++ L
Sbjct: 31 VLLAAGPSAATLDWGDTYAAVDALRRLAIHSPQTLLNGGAAV--------LAAALQLTKEGAGSLRSSMARNSLLALEDLFDFVG---GPVLGEPEVATTLVSLLLGLAGGDKKFLRGTAQSTVDALARAAPGADTVAAFVAHAEDKNTEVQAQALLRADKAL 182
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A7R9U187_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U187_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.690e-11 Identity = 69/222 (31.08%), Postives = 102/222 (45.95%), Query Frame = 1
Query: 1258 RELKLSEEETAMAGAPQGPVYQVAVLETGEF--EPSPNAEEEMRAVLAAS--GGGGDWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVD-----IHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLGV---GAKAGVG 1887
+E+++S EE+ +AGAP GP+Y + V E E AEE + + LA + G +WA + A+ RRL A L ++ LA A+ + RS++ RN LL + F D I +V L R AG +F+ A A+ AA + + S+ + L DRN +VA +A E CLA LGV G++AG G
Sbjct: 113 QEMEISIEESRLAGAPSGPIYNLPVPERAELLAVAEGTAEELLASALAMAQTAGEDEWAKRHDAIICFRRL----------ADDAGSRGLIAETLAECLAWLADAIRSERSAIARNGLLCATEFFEHFGASESATDAWGAHIANIVETLLHRSAGGPKFVGNAANAALTAAVKHVDAASLCVVLRNGLSDRNPDVAGNAALHIEGCLARLGVQSKGSRAGAG 324
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: W7T7Y5_9STRA (Armadillo-like helical n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Y5_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.360e-7 Identity = 75/217 (34.56%), Postives = 104/217 (47.93%), Query Frame = 1
Query: 1270 LSEEETAMAGAPQGPVYQVAVLETGEFEPSPNAEEEMRAVL-------AASGGG---------GDWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVD---IHPMVAGTLQRLA-GDKRFICQTAAQAMEAA--ARTGPSVS-VLHAILPSLDDRNAEVASKSAFFSEQCL 1851
+S E AM GAPQG VYQV V T + PS + ++ VL AA GG DWA Y +D+ RRL + H + +L L+ L +V NLRSSM RNALL + ++F + +G + PM A L++L GDK+FI + AA A G +V +L A+LP + + AE A+ S + EQ L
Sbjct: 362 MSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLAL-HPSL--------GPALLRPHLPLLLPFLLRSVHNLRSSMQRNALLCLRELF--VPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGL 567
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A1V9YDL8_9STRA (TOG domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDL8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.050e-7 Identity = 63/217 (29.03%), Postives = 99/217 (45.62%), Query Frame = 1
Query: 1399 SGGGGDWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDIHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLGVGAKAGVGLP-EGMEPGGLVAGMSRALNGKVAEGRASARRALLRSRKAMGLGAFEAAVAESL 2046
S G W D YSAV++ R+ F V LE LL + NLRS++ RNALL + ++F ++ + P++ L R DK+F+ A A++ A + + +L +LP D+NA + +K+ + EQCL A P E + + ++ LN + G+ +A+R L+ RK G FEA VA L
Sbjct: 86 SPGATSWKDKYSAVETLRQTIKFDPAYV---------QGYEHLLEVAKELLVPSAMNLRSTLARNALLCIGELFQCVRTQPYLPVLVPVL---LYRSITDKKFMQSVATTALDHALASCDPIDLLEQLLPFSTDKNAHLVTKAGHYVEQCLIK-----SAAAEQPWEAAQLVSWIKDLANFLNCRDVHGKPAAKRCLILLRKTFGDATFEATVAAEL 285
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A7S1XTX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTX9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.040e-7 Identity = 57/192 (29.69%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 1294 AGAPQGPVYQVAVLETGEFEPSPNAEEEMRAVLAASGGGGDWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVDIHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLGVG 1869
A A G Q LE+ E PS + E++ VL +W D++ +DS R L + HA ++ A E ++L +A NLRS++V+NA+L V D++ L + +I A L+R A F+ + A A+++ R G + L A + S R+A + K+A +CL LG G
Sbjct: 79 AAATPGGTLQPRYLESAEIVPSAKPKAELQHVLRNLNND-EWPDVFHMLDSVRCLALHHAALMAGRHA----------TEVCRAVLRVADNNLRSAVVKNAILCVGDLWDGLGAALD-AEIPRAAAILLKRAADTSGFLQEQADVAIDSLIRNGSELRPLTAFMASASHRSATIRGKAALGIFRCLQHLGAG 258
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: V4M1E7_EUTSA (TOG domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4M1E7_EUTSA) HSP 1 Score: 60.8 bits (146), Expect = 3.680e-6 Identity = 57/232 (24.57%), Postives = 113/232 (48.71%), Query Frame = 1
Query: 1300 APQGPVYQVAVLETGEFEPSPNAEEEMRAVLAASGGGGDWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVFSFLKHDVGRVD-IHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLGVGAKAGVGLPE-GMEPGGLVAGMSRALNGKVAEGRASARRALL 1989
A +G + ++ +E+ + + + ++++L DW + A++S RRL IFH E + +E ++ L+ ++ N RS++ + A + AD+FS + +D + P++ L + + DKRF+C+ A +A+ A +L + P L +RN + +K++ + + LG+ G+ E G+E LV + L+ ++ E R +AR LL
Sbjct: 64 AERGVIIEIEYIESQDLNHVTDVDAVLKSLLTGLDSK-DWVSVCDALNSVRRLSIFHKEETLHM------------VEKVIPLVVKSLKNPRSAVSKTACMTSADIFSSYNDQI--IDQLDPLLTQLLLKSSQDKRFVCEAAEKALVAMTTHVSPTLLLPKLQPCLKNRNPRIRAKASMCFSRSVPRLGI-----EGIREYGIEK--LVQAAASQLSDQLPESREAARTVLL 273
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Match: A0A7J7MR32_9MAGN (TOG domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MR32_9MAGN) HSP 1 Score: 59.7 bits (143), Expect = 1.080e-5 Identity = 40/151 (26.49%), Postives = 77/151 (50.99%), Query Frame = 1
Query: 1414 DWADLYSAVDSARRLCIFHAEVVVRATAGXXXXXXXSNLEGLVSLLAMAVGNLRSSMVRNALLGVADVF-SFLKHDVGRVDIHPMVAGTLQRLAGDKRFICQTAAQAMEAAARTGPSVSVLHAILPSLDDRNAEVASKSAFFSEQCLATLG 1863
DW + A+++ RRL IFH E ++ L ++SL+ + N RS++ + A + D+F ++ H + +D P++ L + + DKRF+C+ A +A+ A + PS +L + P L +N + +K++ + + LG
Sbjct: 146 DWVMVCGALNTVRRLSIFHKEAMLEI------------LGNVISLIVKCLKNPRSAVCKTAAMTCKDIFEAYGDHVIDSMD--PLLLQLLLKSSQDKRFVCEAAERALVAMTTSIPSTMLLAKVQPYLKHKNPRIRAKASMCFSRSVKQLG 282 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6406.15083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6406.15083.1 >prot_L-elsbetiae_contig6406.15083.1 ID=prot_L-elsbetiae_contig6406.15083.1|Name=mRNA_L-elsbetiae_contig6406.15083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=774bp MRAYSPPVTRQRARAIILSEAAQRDQRGQQEREREQGAGGQAQAQQAQGRback to top mRNA from alignment at L-elsbetiae_contig6406:2609..9013+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6406.15083.1 ID=mRNA_L-elsbetiae_contig6406.15083.1|Name=mRNA_L-elsbetiae_contig6406.15083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6405bp|location=Sequence derived from alignment at L-elsbetiae_contig6406:2609..9013+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6406:2609..9013+ >mRNA_L-elsbetiae_contig6406.15083.1 ID=mRNA_L-elsbetiae_contig6406.15083.1|Name=mRNA_L-elsbetiae_contig6406.15083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4644bp|location=Sequence derived from alignment at L-elsbetiae_contig6406:2609..9013+ (Laminarionema elsbetiae ELsaHSoW15)back to top |