prot_L-elsbetiae_contig640.15076.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig640.15076.1
Unique Nameprot_L-elsbetiae_contig640.15076.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length682
Homology
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A6H5JIQ8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ8_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.230e-50
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVEDN 586
            GN+GDYAFGDLS LIQQLMAADTNRHGPPPASKK VE LPTI +AKG  L GQECAVCKD+F  G+KARELPCQHSFHE CILPWVAERNTCPTCR+ELP +D+
Sbjct:  353 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTITVAKGSELEGQECAVCKDEFAAGEKARELPCQHSFHEQCILPWVAERNTCPTCRHELPTDDS 456          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: D7FYE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 3.660e-44
Identity = 272/497 (54.73%), Postives = 297/497 (59.76%), Query Frame = 0
Query:   14 MEPSPSESTAVYFCHVCMSRVGVRKTSTQELECRRCEQTFVEELLESVVGNAALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGSAP-QGIPIPLMGMPFSMLQAFGMGGHPPADTQPGAAGSAGGENSGTGGGIXXXXXXXXXXXXXXXXVRSGPFFFGGRFNIGSSSSGAXXXXXXXXXXXXXXXXXXXSSGGGGGNSLASRVRRYRQGSXXXXXXXXXXXXXXXXXXXXXXXXXPSGDSSVRSGARRGXXXXXXXXXXXXXXXXXRPGRNAAARASGDSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDADNPLLATLIQALGGAGSGNHHAEIFIGPNMQRLHVPSQQAGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDI-GNGLAAMLGGQGLG-FMLRGFGMPAGMAXXXXXXXXXXXXXGNMGDYAFGDLSNLIQQLMAADTNR 507
            ME S  EST+VYFCHVCMSRVGVRKTST+ELECRRCEQTFVEELLESVVGNAAL G  XXXXXXXXXXXXXXXXXXXXXXXXXXXX        +RG  P QG P+  +GMPFSMLQA G+GG  P + +P A G   GE  G       XXXXXXXXXXXX   R+GPF FGGRF +GS     XXXXXXXXXXXXXXXXXXX     GG+S +SRV+R+RQ                            +G  + R  AR+                                                              XXXXXXXXXXXXXXXXXXXXXXXXXX LDA+NP L TL+QALGGAG+   HAEIFIGPNMQR+        GAA   XXXXXXXXXXXXXXXXX        PD  G  + AMLG      F+LRG G+P  M     XXXX     GN+GDYAFGDLS LIQQLMAADTNR
Sbjct:    1 MEASSRESTSVYFCHVCMSRVGVRKTSTEELECRRCEQTFVEELLESVVGNAALGGIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGRRG--TRGGTPGQGAPV--IGMPFSMLQALGVGGMHPLNARPAAPGGDRGEGEGG----EQXXXXXXXXXXXXEGGRAGPFLFGGRFAMGSGGXXXXXXXXXXXXXXXXXXXXXX-----GGSSFSSRVQRFRQAH--------------------------AGPQTPR--ARQ--------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXLDAENPFLGTLLQALGGAGA--EHAEIFIGPNMQRM-------SGAARGGXXXXXXXXXXXXXXXXXA-------PDFAGXXIGAMLGXXXXXXFLLRGIGIPGAMGGMGMXXXXGPG--GNVGDYAFGDLSQLIQQLMAADTNR 376          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: D0MY65_PHYIT (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MY65_PHYIT)

HSP 1 Score: 136 bits (342), Expect = 2.420e-32
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDYAFG+++N+I QLM  D NRHG PPA+K+VV+ LP + I +G      EC VCKD F   D+   LPC+HSFH  CILPW+ + N+CP CR+ELP +D
Sbjct:  151 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVDKLPKVKITQGEVDGSAECPVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 253          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: F0WH88_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WH88_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.190e-32
Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDY  G+LS +I QLM  D+NRHG PPA+K+ +E LP ++I +       ECAVCKDDF   ++AR +PC H+FH  CILPW+ + N+CP CRYELP +D
Sbjct:  195 GNPGDYVVGNLSTVINQLMQNDSNRHGTPPAAKEAIEKLPVLSITQEDINTNSECAVCKDDFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPVCRYELPTDD 297          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: M4BXL0_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXL0_HYAAE)

HSP 1 Score: 130 bits (327), Expect = 4.650e-32
Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDYAFG+++N+I QLM  D NRHG PPA+K+VVE LP + + +       EC VCKD F   D+   LPC HSFH  CI+PW+ + N+CP CR+ELP +D
Sbjct:    7 GNAGDYAFGNMANVINQLMQHDPNRHGAPPAAKEVVEMLPKVKVTQNEVDGSAECPVCKDLFAVDDEVHCLPCNHSFHPDCIVPWLKQHNSCPLCRFELPTDD 109          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A329S505_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S505_9STRA)

HSP 1 Score: 135 bits (340), Expect = 7.230e-32
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDYAFG+++N+I QLM  D NRHG PPA+K+VVE LP + I +       EC VCKD F   D+   LPC+HSFH  CILPW+ + N+CP CR+ELP +D
Sbjct:  170 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVEKLPKVKITQVEVDGSAECPVCKDSFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPVCRFELPTDD 272          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A024G705_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G705_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.450e-32
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDY  G+LS +I QLM  D+NRHG PPA+K+ +E LP + I +    +  ECAVCKD+F   ++AR +PC H+FH  CILPW+ + N+CP CRYELP +D
Sbjct:  138 GNPGDYVVGNLSTVINQLMQNDSNRHGTPPAAKEAIEKLPMLAITQEDININPECAVCKDEFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPICRYELPTDD 240          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A3R7G1L0_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G1L0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.060e-31
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDYAFG+++N+I QLM  D NRHG PPASK+VVE LP + I +       EC VCKD F   D+   LPC HSFH  CILPW+ + N+CP CR+ELP +D
Sbjct:  185 GNPGDYAFGNMANVINQLMQNDPNRHGAPPASKEVVEKLPKVKITQSEVDNSAECPVCKDFFAVDDEVHRLPCDHSFHPDCILPWLKQHNSCPLCRFELPTDD 287          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A067CFN4_SAPPC (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFN4_SAPPC)

HSP 1 Score: 134 bits (338), Expect = 2.470e-31
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
Query:  485 MGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            +GDYAFG++S +I  LM  D N+HG PPASK VVE LP ++I +      Q+CAVCKD F   D+ R LPC H FH  CILPW+A+ N+CP CR+ELP +D
Sbjct:  189 IGDYAFGNISTIINHLMQNDPNQHGAPPASKSVVESLPVVHITEEDVAKNQDCAVCKDMFALHDEIRRLPCTHDFHPDCILPWLAQHNSCPVCRFELPTDD 289          
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Match: A0A3R7W2Z9_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W2Z9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.880e-31
Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  483 GNMGDYAFGDLSNLIQQLMAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKARELPCQHSFHEHCILPWVAERNTCPTCRYELPVED 585
            GN GDYAFG+++N+I QLM  D NRHG PPA+K++VE LP + I +       EC VCKD F   D+   LPC+HSFH  CILPW+ + N+CP CR+ELP +D
Sbjct:  217 GNSGDYAFGNMANVINQLMQNDQNRHGAPPAAKEIVEQLPKVKITQNEVDGSAECTVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 319          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig640.15076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIQ8_9PHAE2.230e-5082.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FYE5_ECTSI3.660e-4454.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D0MY65_PHYIT2.420e-3255.34RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
F0WH88_9STRA4.190e-3254.37RING-type E3 ubiquitin transferase n=1 Tax=Albugo ... [more]
M4BXL0_HYAAE4.650e-3253.40RING-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A329S505_9STRA7.230e-3255.34RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A024G705_9STRA9.450e-3253.40RING-type domain-containing protein n=1 Tax=Albugo... [more]
A0A3R7G1L0_9STRA1.060e-3156.31RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
A0A067CFN4_SAPPC2.470e-3155.45RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A3R7W2Z9_9STRA2.880e-3154.37RING-type E3 ubiquitin transferase n=2 Tax=Peronos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 537..577
e-value: 1.8E-8
score: 44.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 536..578
e-value: 2.8E-13
score: 50.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 537..578
score: 12.829
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 500..584
e-value: 1.9E-20
score: 74.3
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 482..618
NoneNo IPR availablePANTHERPTHR15710:SF75E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKEcoord: 482..618
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 527..584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig640contigL-elsbetiae_contig640:5847..19596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig640.15076.1mRNA_L-elsbetiae_contig640.15076.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig640 5847..19596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig640.15076.1 ID=prot_L-elsbetiae_contig640.15076.1|Name=mRNA_L-elsbetiae_contig640.15076.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=682bp
TQALTRAQPNQADMEPSPSESTAVYFCHVCMSRVGVRKTSTQELECRRCE
QTFVEELLESVVGNAALSGGGSDRGGQEPSSPSAATAAGGGRGGGAVPAG
GAGSGGGSRGSAPQGIPIPLMGMPFSMLQAFGMGGHPPADTQPGAAGSAG
GENSGTGGGISGGGGSGGGDGGSGDGVRSGPFFFGGRFNIGSSSSGASSN
SGSNSGSNSGSNSGSNSSGGGGGNSLASRVRRYRQGSGGSGGNGGGSGGN
NAGPSSRASAAAPSGDSSVRSGARRGSAAATASPSAANAASAARPGRNAA
ARASGDSRRDNGGGQGQAAGGGGGQRGGGSGGGGDGGAGGGGARGGGAAA
GGGGGGAGGGSGGGLDADNPLLATLIQALGGAGSGNHHAEIFIGPNMQRL
HVPSQQAGGAAGAGAGAGAAAGAGAGAAGAAAGAGAAAGPDIGNGLAAML
GGQGLGFMLRGFGMPAGMAGMGMGMMGMGPGGGNMGDYAFGDLSNLIQQL
MAADTNRHGPPPASKKVVEGLPTINIAKGGALLGQECAVCKDDFEEGDKA
RELPCQHSFHEHCILPWVAERNTCPTCRYELPVEDNNAAAAAPAAAANNN
AADDDDDSGGGGGDDGNSNSSDGGANMSSAASTSTSTSSSPAATATAASA
SAPSSSSRTSSSRRSRASSGGGGSGGGGGSQT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD