prot_L-elsbetiae_contig1173.1506.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1173.1506.1
Unique Nameprot_L-elsbetiae_contig1173.1506.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length773
Homology
BLAST of mRNA_L-elsbetiae_contig1173.1506.1 vs. uniprot
Match: D8LKG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG5_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 1.870e-96
Identity = 199/360 (55.28%), Postives = 234/360 (65.00%), Query Frame = 0
Query:    1 LHAKVSALANQVKLAKAWQDRHPACFLPVAWAFCAAVIAKW----SCRGGEGEASTEGGAAGAAGRGRVGG----RIYEGTSDDSMRPRQPSTFSLLALLAAFLDKDSTARGVSKGTFGGGANPTFAKQNPNIGEVFLRFSAFVQQLGVASSRETVA--PTVLSLLDNGEVEEIWAATTC----PSGKTLPTGCEKAAARP------------ILVQVGGERLEDLAEASTVSQLRRTCATIERSMIPDAARGLPVWEQDIRWSLLGFALERVGSDGKEEAGGEQGMQL---PSYLDWMEVELQMCINDYIDAMPGVYGFNVTGRSPLTPTMTTELDSKLASDVMQARTANVVFAAALRV 331
            L  KV+AL  +VK AK W DRHPACFLPVAWA CAAV AKW       GG G     GGA     R R GG    R+ E     + + RQPS FS+LALLAAFLDKDS ARGVSK TFG G +PT AK NPNIGE+FLRF ++V+QLGV   R   A  P  ++LLD+GE+E  W+A       P GK        A   P            I VQVGG+ LEDL +A+ VS LRR CA IE+S+ PD ARGLPVW QDIRWSLLGFALE+   +  EE+ G  G +    PSYLDWME+ LQMC+ND ID MPG+YGFNVTGR+PL P     LD + A+DV+QARTA+VVF+AAL+V
Sbjct:  217 LDDKVAALVTKVKRAKCWHDRHPACFLPVAWAVCAAVAAKWPTDGDLGGGAGVMWENGGA-----RNRRGGVSAARVLERAR--ARKARQPSPFSILALLAAFLDKDSKARGVSKATFGAGPSPTCAKHNPNIGEIFLRFCSYVRQLGVKPGRRKSAGPPATMNLLDSGELEMWWSAAAAVAATPKGKKPQRSDRGAETEPEEIAMGQDQADLIRVQVGGKVLEDLVDAALVSGLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFALEQSQGENDEESEGRVGKKKEGQPSYLDWMEIRLQMCMNDGIDEMPGMYGFNVTGRAPLAPEAIANLDRQHAADVLQARTADVVFSAALQV 569          
BLAST of mRNA_L-elsbetiae_contig1173.1506.1 vs. uniprot
Match: A0A6H5KUD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD4_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 5.320e-78
Identity = 220/519 (42.39%), Postives = 269/519 (51.83%), Query Frame = 0
Query:    1 LHAKVSALANQVKLAKAWQDRHPACFLPVAWAFCAAVIAKWSCRGGEGEASTEGGAAGAAGRGRVGGRIYEGTSDDSMRPRQPSTFSLLALLAAFLDKDSTARGVSKGTFGGGANPTFAKQNPNIGEVFLRFSAFVQQLGVASSRETVA--PTVLSLLDNGEVEEIWAATTC----PSGKTLPTGCEKAAARP---ILVQVGGERLEDLAEASTVSQLRRTCATIERSMIPDAARGLPVWEQDIRWSLLGFALERVGSDGKEEAGGEQGMQL---PSYLDWMEVELQMCINDYIDAMPGVYGFNVTGRSPLTPTMTTELDSKLASDVMQARTANVVFAAALRVGNGERGVNSGGGSSSGANSGSSGSLFG-SDGEDEEGIDGVPMSM-SGSVSLKVRPGRSSAGVGASAEPAAGPAPVPERVVARETTTRTGPQGQGLADTPSSGSLLLPLEGLSATRTTKAMATSTQTTASTRHVTESDYRPPPGGKGKVVQAGAVLALGDRLMKEAAIVIASAKITT 505
            L  +V+AL  +VK AK W DRHPACFLPVAWA CAAV AKW   G  G     GG   +   G  G R+    +    + R+PS FS+LALLAAFLDK                                        LGV   R   A  P  L+LLD+GE+E  W+A       P GK       +A A        QVGG+ LEDL +A+  S LRR CA IE+S+ PD ARGLPVW QDIRWSLLGFA E+   +  EE+ G  G +    PSYLDWME+ LQMC+N+ ID MPG+YGFNVTGR+PL P     LD + A+DV+QARTA+VVF+AAL+VG G +G +  GG    AN  SS SLFG S  E++E +DG PM + + S+ L+V                 GPA         E +    PQ QG  +T   G   L  +G+                                 +GKV   GAVLALGDRLMKEAA V+ASAK TT
Sbjct:   86 LDDEVAALVTKVKRAKCWHDRHPACFLPVAWAVCAAVAAKWPSDGDLG-----GGPGASCEHGAPGCRLARARA---RKARRPSPFSILALLAAFLDK----------------------------------------LGVKPGRRKSAGPPATLNLLDSGELEMWWSAAAAVAAAPKGKKPQRSDREAEAETGELATGQVGGKVLEDLVDAALASDLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFAFEQSEGENDEESEGGVGEKREGRPSYLDWMEIRLQMCMNEGIDEMPGMYGFNVTGRAPLAPEAIANLDRQHAADVLQARTADVVFSAALQVGGGSQGQHGSGG----ANGDSSDSLFGGSASEEDEELDGEPMVVVTASLPLQVN----------------GPAAAEAE---HEPSVDVAPQ-QGTGETVEVGEGALKDDGV---------------------------------RGKV---GAVLALGDRLMKEAAGVLASAKATT 496          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1173.1506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKG5_ECTSI1.870e-9655.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUD4_9PHAE5.320e-7842.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 585..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1173contigL-elsbetiae_contig1173:9642..23922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1173.1506.1mRNA_L-elsbetiae_contig1173.1506.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1173 9642..23922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1173.1506.1 ID=prot_L-elsbetiae_contig1173.1506.1|Name=mRNA_L-elsbetiae_contig1173.1506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=773bp
LHAKVSALANQVKLAKAWQDRHPACFLPVAWAFCAAVIAKWSCRGGEGEA
STEGGAAGAAGRGRVGGRIYEGTSDDSMRPRQPSTFSLLALLAAFLDKDS
TARGVSKGTFGGGANPTFAKQNPNIGEVFLRFSAFVQQLGVASSRETVAP
TVLSLLDNGEVEEIWAATTCPSGKTLPTGCEKAAARPILVQVGGERLEDL
AEASTVSQLRRTCATIERSMIPDAARGLPVWEQDIRWSLLGFALERVGSD
GKEEAGGEQGMQLPSYLDWMEVELQMCINDYIDAMPGVYGFNVTGRSPLT
PTMTTELDSKLASDVMQARTANVVFAAALRVGNGERGVNSGGGSSSGANS
GSSGSLFGSDGEDEEGIDGVPMSMSGSVSLKVRPGRSSAGVGASAEPAAG
PAPVPERVVARETTTRTGPQGQGLADTPSSGSLLLPLEGLSATRTTKAMA
TSTQTTASTRHVTESDYRPPPGGKGKVVQAGAVLALGDRLMKEAAIVIAS
AKITTTSQMSNYSERETSISAASIPSNVGATAPKEQSAADVAVLHKRLHA
EEGERGGDANGGGSTCRQEQTDGGGETARVGVARSSAATEKKTKEEEEIE
RAKARKTAKERGLERGKQIAEKMRADRDALALKKQREDEAREKWVAKQLA
AVEERFTMGRGTKNGDRERRVSGTKSAICMVGAAEARQRRSVDRSRSKSS
SVPRRSKSRRSSVDSGTSTDGDKGGRKDGSRDGRHERCQSERRGSSCSPK
SKARTRIRDGFGGTNSIKSRSSS
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