mRNA_L-elsbetiae_contig64.15071.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI) HSP 1 Score: 303 bits (775), Expect = 2.980e-103 Identity = 157/172 (91.28%), Postives = 164/172 (95.35%), Query Frame = 1 Query: 13 AKAPKWYAGDDVKPKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALANPMLKAYLNAKFSLKKGDRPHEMIF 528 AKAPKWY+GDDVKPK+ PQKHNPTKLRS+I PGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIP ADDSYFTR+EVA KT+EDQFF Q AKSSTVSDKRKADQKTVDAG+LAA+ NPMLKAYLNAKFSLKKGDRPHEMIF Sbjct: 9 AKAPKWYSGDDVKPKAAPQKHNPTKLRSTITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQG-AKSSTVSDKRKADQKTVDAGVLAAMTNPMLKAYLNAKFSLKKGDRPHEMIF 179
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA) HSP 1 Score: 209 bits (533), Expect = 2.530e-66 Identity = 116/173 (67.05%), Postives = 133/173 (76.88%), Query Frame = 1 Query: 25 KWYAGDDVK-PKSPPQK---HNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALA-NPMLKAYLNAKFSLKKGDRPHEMIF 528 +WY DD+K P+ K H PTKLRSSI PGT+ +LLSGRFRGKRVVFLKQ+ SGTLLVTGPY VNGVP+RRVNQAYVIATS +DVSKV + DD+YF R AKKT ED FF QA +K S VSD++K DQ VDA ILA L+ + +LKAYLNAKFSL K DRPHEM+F Sbjct: 14 RWYPADDIKAPRKSKAKRSVHKPTKLRSSITPGTVCVLLSGRFRGKRVVFLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQA-SKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: K3WPZ3_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPZ3_GLOUD) HSP 1 Score: 189 bits (480), Expect = 1.570e-57 Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 1 Query: 13 AKAPKWYAGDDVKPKSPPQK-----HNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKK-TEEDQFFNQALAKSS-TVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 528 +KA KWY D + K K KLR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVP+RRVNQAYVIATS V++S VT+P DDSYF +++ +KK ++E+QFF Q+ A S+ +SDKRK DQK +DA ++ L + P L+AYLNAKF+L K DR HE+ F Sbjct: 61 SKAAKWYPADYIPKKLASAKTARNSKKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSTKVELSDVTLPDIDDSYFVKEKPSKKDSKEEQFFAQSGAASAPAISDKRKQDQKAIDAILMKKLKDEPYLQAYLNAKFTLTKNDRVHELQF 240
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: Q7XR19_ORYSJ (60S ribosomal protein L6 n=16 Tax=Oryzeae TaxID=147380 RepID=Q7XR19_ORYSJ) HSP 1 Score: 188 bits (477), Expect = 2.580e-57 Identity = 107/178 (60.11%), Postives = 132/178 (74.16%), Query Frame = 1 Query: 7 APAKAPKWYAGDDVKPKSPP-QKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRD--EVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 528 A A APK+Y DDVKP+ P +K NPTKLRSSI PGT+LILL+GRF GKRVVFLKQL SG LLVTGP+ +NGVP+RRVNQ YVIATS VD+S V + DD YF+RD + AKKTE + F + A + + + +K DQK VDA ++ A+ A P LK YL A+FSL+ GD+PHEM+F Sbjct: 46 AAAAAPKFYPADDVKPRQPSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEKFDDKYFSRDKKQKAKKTEGELFETEKEA-TKNLPEFKKEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKPHEMVF 222
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A7S4V8G6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8G6_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.660e-57 Identity = 103/174 (59.20%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 16 KAPKWYAGDDVKPKSPPQKH--NPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 528 K+P++Y DDVK P +K N K+RSSI GT+LILL+GRFRGKRVV LK L SG LLV+GPY +NGVP+RRV+QAYVIAT+ +VDVS + + DD+YF R + + ED+FF AK + VS+ RKADQK VDA +L A+ A PMLK YLNAKFSL KGD+PH+M+F Sbjct: 49 KSPRFYPADDVKRPLPSRKSKKNAAKVRSSISAGTVLILLAGRFRGKRVVCLKALESGLLLVSGPYKINGVPLRRVHQAYVIATTTTVDVSAIDVSAIDDAYFARAASSGEEGEDEFFANDAAKPAVVSETRKADQKKVDAALLKAVEAVPMLKQYLNAKFSLSKGDKPHKMVF 222
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A7S1U5W8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5W8_9STRA) HSP 1 Score: 188 bits (477), Expect = 4.470e-57 Identity = 104/171 (60.82%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 22 PKWYAGDDVK-PKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 528 P Y DDVK P + + PTKLR+SI PGT+LI+L+GRFRGKRVVFLKQL SGTLLVTGPY VNGVP+RRVNQAYVIATS+ VD++ V++P DD +F R++ KT+E+QFF+ ++ VS RK QK VDAGILAA+ P+L+AYL A+FSL+ GD+PH+M F Sbjct: 71 PAMYPADDVKKPLMRFRVNKPTKLRASITPGTVLIMLAGRFRGKRVVFLKQLSSGTLLVTGPYKVNGVPLRRVNQAYVIATSVVVDLAGVSLPDIDDEFFAREKKESKTDEEQFFSNEPT-ATVVSQARKDAQKAVDAGILAAVKKVPLLQAYLGARFSLRNGDKPHKMKF 240
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A1J7IM48_LUPAN (Ribosomal_L6e_N domain-containing protein n=5 Tax=Lupinus TaxID=3869 RepID=A0A1J7IM48_LUPAN) HSP 1 Score: 186 bits (471), Expect = 3.020e-56 Identity = 104/178 (58.43%), Postives = 129/178 (72.47%), Query Frame = 1 Query: 7 APA-KAPKWYAGDDVK-PKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAK-KTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 528 APA KAPK+Y DDVK P+ K PTKLR+SI PGT+LILL+G F+GKRVVFLKQLPSG LLVTGP+ +NGVP+RRVNQAYVI TS VDVS V + DD YFT+D K K E +FF + + + ++K DQKTVD+ +L A+ + P LK YL A+FSLK G +PHE++F Sbjct: 57 APAEKAPKFYPADDVKKPRLNKHKPKPTKLRASITPGTVLILLAGHFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSAVNVDKFDDKYFTKDAKKKNKKGEGEFFEAEKEEKNVLPQEKKDDQKTVDSALLQAIQSVPDLKTYLGARFSLKSGQKPHELLF 234
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: B8CBR7_THAPS (60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBR7_THAPS) HSP 1 Score: 184 bits (466), Expect = 3.030e-56 Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 1 Query: 16 KAPKWYAGDDV-KPK-SPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 528 K+ ++Y DD+ +PK S +KHN K+R+S+ PGT+ ILLSGRFRGKRVV LK L SG LLVTGPY +NGVP+RRVNQAYVIATS VDVS + DD+YF R + E++FF AK + VSD+RKADQK VDA IL A+ + P++K YL + FSLKK DRPHEMIF Sbjct: 5 KSARYYPADDIPRPKHSRAKKHNAPKVRASLTPGTVCILLSGRFRGKRVVCLKALESGLLLVTGPYKINGVPLRRVNQAYVIATSTKVDVSGADVSKIDDAYFARVKSDSAEGEEEFFANDAAKPAVVSDQRKADQKKVDAAILKAVESTPLMKNYLGSNFSLKKHDRPHEMIF 178
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A3R7J7S6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7S6_9STRA) HSP 1 Score: 185 bits (470), Expect = 4.280e-56 Identity = 102/175 (58.29%), Postives = 130/175 (74.29%), Query Frame = 1 Query: 25 KWYAGDDVKPKSPPQKHN-----PTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKK-TEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 528 KWY D + K K + +LR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY+VNGVP+RRVNQA+VIATS +D+S V +P DD+YFT+D+ AKK ++E++FF ++++RK DQKTVDA ++ LA+ P L+AYLNAKF+L K DR H+M+F Sbjct: 60 KWYPVDHIPKKLASAKTSRNSKKTARLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYAVNGVPLRRVNQAFVIATSTRMDLSNVQLPEIDDAYFTKDKPAKKNSKEERFFADQQTAGPMIAEQRKKDQKTVDALLMKKLADEPYLRAYLNAKFTLTKNDRVHDMLF 234
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A6A3T8I8_9STRA (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T8I8_9STRA) HSP 1 Score: 185 bits (469), Expect = 5.370e-56 Identity = 108/176 (61.36%), Postives = 130/176 (73.86%), Query Frame = 1 Query: 25 KWYAGDDVKPKSPPQ---KHNP---TKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKT-EEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 528 KWY D + PK P K N KLR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVP+RRVNQA+VIATS +D++ V +P DD YFT+D+ AKK+ +ED+FF A A ++++RK DQK VDA ++ LAN P L+AYLNAKF+L K DR H+M F Sbjct: 58 KWYPADYI-PKPLPSAKTKRNSIKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAFVIATSTRMDLTDVQLPEIDDEYFTKDKPAKKSSKEDRFFEMATA--PVIAEQRKKDQKEVDALLMKKLANEPYLRAYLNAKFTLTKNDRVHDMRF 230 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig64.15071.1 >prot_L-elsbetiae_contig64.15071.1 ID=prot_L-elsbetiae_contig64.15071.1|Name=mRNA_L-elsbetiae_contig64.15071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp MQAPAKAPKWYAGDDVKPKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKback to top mRNA from alignment at L-elsbetiae_contig64:28067..29986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig64.15071.1 ID=mRNA_L-elsbetiae_contig64.15071.1|Name=mRNA_L-elsbetiae_contig64.15071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1920bp|location=Sequence derived from alignment at L-elsbetiae_contig64:28067..29986- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig64:28067..29986- >mRNA_L-elsbetiae_contig64.15071.1 ID=mRNA_L-elsbetiae_contig64.15071.1|Name=mRNA_L-elsbetiae_contig64.15071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1062bp|location=Sequence derived from alignment at L-elsbetiae_contig64:28067..29986- (Laminarionema elsbetiae ELsaHSoW15)back to top |