mRNA_L-elsbetiae_contig6390.15058.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6390.15058.1
Unique NamemRNA_L-elsbetiae_contig6390.15058.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 1.090e-119
Identity = 202/300 (67.33%), Postives = 231/300 (77.00%), Query Frame = 2 
Query:  170 GVDLMDRHHLNRYDSESRRTLKKGFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPIQQLSMVLLRRSFLIRKRV---TIAGGAANANEGEEGPPVLPDVPMANQTTNKFSPAYAKKAKQIAK----RPRPPSD--DDEEGAAKAFSSAPAPSPPL--DLKSAVKPLISQLVAMKWP-GWSNPFMTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQAAGGSGGSGQVDKKQRI 1033
            GVD+MDRH L+RYD+ESRRTL+KG SHFLSPQLQ LIKEKPR+AL+EKA FAELL+EE S     I++LSM L+RRSF+IRKRV   + AGG A         P  PD+P A QTTNK SPA+A+KAKQ+AK    R RP SD  + E  +A  +SS+ + + PL  + KS VKPLIS+LVAMKWP GW NPF TVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAE+EADLEL+V NAL FNRP DPVYQFAL L+ AFR EL  +KR LEDLAQQ  G SG  G  DKKQR+
Sbjct:   10 GVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRR--IEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXXVP--PDMPAALQTTNKLSPAFARKAKQVAKQAMKRQRPSSDNGEGEMASASGYSSSASAAAPLSQEAKSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALQLQEAFRRELSVIKRNLEDLAQQRGGVSGSEGVQDKKQRV 305
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A836CA18_9STRA (Bromodomain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA18_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.380e-28
Identity = 103/300 (34.33%), Postives = 139/300 (46.33%), Query Frame = 2 
Query:  119 VHLLTPASELAALAEPTG--VDLMDRHHLNRYDSESRRTLKK---GFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPIQQLSMV--LLRRSFLIRKRVTIAGGAANANEGEEGPPVLPDVPMANQTTNKFSPAYAKKAKQIAKRPRPPSDDDEEGAAKAFSSAPAPSPPLDLKSAVKPLISQLVAMKW-PGWSNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            +HL+TP +ELAA  EPT    DL     L  ++ + R          +HFL P L  L++ K RV  +EKA+FAELLA EP A P P +++      +RRSF IR+R    GGA +        P      M   TT    P  A++ ++ A+     + D                   D+  A+ PL  +L  M +   W NPF  V     A     P YF F+K PMNLT++RD L   +Y  +A+  AD+ LV  NA  +NRP DPVY FA  L      EL  +        QQ
Sbjct:   24 LHLITPEAELAAAEEPTANAADLPALASLAHFEKQLRAMPLPHPIDMAHFLPPALLPLLRAKWRVVQAEKANFAELLASEPPA-PQPRKKVPFTEAAMRRSFFIRRR---EGGAPS--------PATVGGSMPFPTTG-GRPITARRLRRPARITGEMTPD-------------------DVSDALTPLHQRLTRMSFGKAWGNPFTQVITPETAAALRVPNYFNFVKEPMNLTWMRDKLRGAEYAAIADYVADIALVRANAQRYNRPGDPVYGFADTLYDVCAQELAQLGYIAPPRPQQ 291
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A5D6YD80_9STRA (Bromo domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.810e-18
Identity = 44/124 (35.48%), Postives = 76/124 (61.29%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L++ + PL+++L  + W GW      +NPF+    + N      P YF+++K PM+LT +++ + K +Y  V +  +D++L+V NA TFNR  +PV+Q A++L   + S+L   + TLEDL Q+
Sbjct:  167 LQTLLAPLVTELRGLTWAGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARVEQFTSDIKLMVANAKTFNREGEPVFQMAIELEQLYESKLVGYRATLEDLQQE 290
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A3F2RFR5_9STRA (Bromo domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.550e-17
Identity = 41/124 (33.06%), Postives = 74/124 (59.68%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L+  + PL+++L  + W GW       NPF+  F K N      P YF+++K PM+LT +++ + + +Y+ + +   D++L+  NA TFNR  +PV+Q A+++   + S+LP  K+  +DL Q+
Sbjct:  151 LQKLLAPLVTELRGLTWAGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKIDQFTTDIKLMAANAKTFNRVGEPVHQMAIEIEQLYESKLPGYKKMFDDLQQE 274
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: K3X1N2_GLOUD (Bromo domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1N2_GLOUD)

HSP 1 Score: 91.7 bits (226), Expect = 5.140e-17
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L+  + PL+++L  + W GW       NPF+    + N      P YF+F+K PM+LT +++ + K +Y  + +  +D++L+V NA TFNR  +PV+Q A++L   + S+L   K TL+DL Q+
Sbjct:  169 LQKLLAPLVTELRGLTWVGWIVNGKAGNPFIQKITRENCKRLGVPNYFDFVKEPMDLTRMKEKVEKAEYVRIDQFTSDIKLMVANAKTFNRVGEPVHQMAIELEQLYVSKLAGYKTTLDDLQQE 292
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: M4BEQ4_HYAAE (Bromo domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ4_HYAAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.060e-16
Identity = 40/124 (32.26%), Postives = 73/124 (58.87%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L+  + PL+++L A+ W GW       NPF+  F K N      P YF+++K PM+LT +++ + + +YT + +   D++L+  NA  FNR  +PV+Q A+++   + S+L   K+  ++L Q+
Sbjct:  142 LQKLLAPLVAELRALTWAGWVVSGKAGNPFLQKFTKDNCKRLGVPNYFDYVKTPMDLTRMKEKVERAEYTKIEQFTTDIKLMAANAKAFNRVGEPVHQMAIEIERLYESKLSAYKKMFDELHQE 265
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A7S2V5Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.870e-16
Identity = 46/123 (37.40%), Postives = 74/123 (60.16%), Query Frame = 2 
Query:  620 APSPPLD-LKSAVKPLISQLVAMKWPG-WSNPFMTVFKKSNAPP----RYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLED 970
            AP P  D ++  ++P+++ L  M + G W NPF TV  + N        YF+FI+RPMNLT+I++ +N  KY+++ E+  D+EL+V NA  +NRP++ VY FA  LR  +   +  +   + D
Sbjct:  218 APLPRADQVQKVLRPVVNSLWKMNFGGQWGNPFRTVIDQENCVALGVANYFDFIERPMNLTWIKEKMNSKKYSSLGELTDDVELMVQNAHKYNRPNEEVYIFATTLREKYYKIISSISEQVLD 340
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A8K1CEI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 1.120e-15
Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L+  + PLI++L ++ W GW       NPF+    K N      P YF+F++ PM+LT I++ + K +Y+ + +   D++L+V+NA TFNR  +PV+Q A +L   + S++     T E+L Q+
Sbjct:  169 LQKVLAPLITELRSLTWSGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRIDQFTVDIKLMVHNAKTFNRVGEPVHQMAGELEQLYESKVVAYGATFEELQQE 292
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BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A7S3YJB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJB1_HETAK)

HSP 1 Score: 84.3 bits (207), Expect = 1.760e-15
Identity = 37/116 (31.90%), Postives = 69/116 (59.48%), Query Frame = 2 
Query:  644 KSAVKPLISQLVAMKWPGWSNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQ 979
            +  +KP+   L+A +W  W NPF  V  + N      P YF+ I+ PMNL +I+  ++K+KY T  + +AD++L++ NA+T+NR  +PV+  A  +R  ++ ++  ++  +  L +
Sbjct:   42 QGVLKPITEILLAKEWKKWGNPFTAVITRENCHKMDVPDYFDVIQTPMNLKWIKAKVDKHKYLTFQQFDADIDLMLENAMTYNREGEPVFAMAKVIRDVYKQKVADLQPAIAVLRE 157
[Close]
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A2D4BWE1_PYTIN (Bromo domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE1_PYTIN)

HSP 1 Score: 84.3 bits (207), Expect = 1.730e-14
Identity = 39/124 (31.45%), Postives = 71/124 (57.26%), Query Frame = 2 
Query:  641 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 982
            L+  + PLI++L  + W  W       NPF+    K N      P YF+F+  PM+LT +++ + K +Y ++ +  +D++L+V NA TFNR  +PV+Q A++L   + +++     T ++L Q+
Sbjct:  168 LQKVLVPLIAELRGLTWSAWIVSGKPGNPFLQKITKENCRRLGVPNYFDFVAEPMDLTRVKEKVEKAEYYSIQQFTSDIKLMVQNAKTFNRVGEPVHQMAIELEQLYEAKVVSYAATFDELQQE 291
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP76_9PHAE1.090e-11967.33Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CA18_9STRA2.380e-2834.33Bromodomain-containing protein n=1 Tax=Tribonema m... [more]
A0A5D6YD80_9STRA7.810e-1835.48Bromo domain-containing protein n=1 Tax=Pythium br... [more]
A0A3F2RFR5_9STRA1.550e-1733.06Bromo domain-containing protein n=2 Tax=Phytophtho... [more]
K3X1N2_GLOUD5.140e-1735.48Bromo domain-containing protein n=1 Tax=Globispora... [more]
M4BEQ4_HYAAE4.060e-1632.26Bromo domain-containing protein n=1 Tax=Hyaloperon... [more]
A0A7S2V5Q0_9STRA9.870e-1637.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CEI2_PYTOL1.120e-1534.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3YJB1_HETAK1.760e-1531.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2D4BWE1_PYTIN1.730e-1431.45Bromo domain-containing protein n=2 Tax=Pythium in... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6390contigL-elsbetiae_contig6390:7467..10701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score377.5
Seed ortholog evalue6.3e-102
Seed eggNOG ortholog2880.D7FUU3
KEGG koko:K10523
KEGG Pathwayko04340,ko04341,map04340,map04341
KEGG ModuleM00384
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000302,GO:0001101,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0006355,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009553,GO:0009555,GO:0009611,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009734,GO:0009737,GO:0009738,GO:0009739,GO:0009743,GO:0009751,GO:0009753,GO:0009755,GO:0009756,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010167,GO:0010182,GO:0010200,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010604,GO:0014070,GO:0016020,GO:0019005,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0023052,GO:0030162,GO:0030163,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031461,GO:0031625,GO:0032501,GO:0032502,GO:0032870,GO:0032991,GO:0033993,GO:0042221,GO:0042493,GO:0042542,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045935,GO:0046677,GO:0048229,GO:0048511,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051246,GO:0051252,GO:0051338,GO:0051347,GO:0051603,GO:0051716,GO:0051972,GO:0051973,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071322,GO:0071365,GO:0071396,GO:0071495,GO:0071704,GO:0080090,GO:0097305,GO:0097306,GO:0098588,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700,GO:1901701,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2000278,GO:2000573,GO:2001141
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1778@2759
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04121
Ec32 ortholog descriptionBromodomain protein
Ec32 orthologEc-06_001120.1
Exons3
Model size1270
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6390.15058.1prot_L-elsbetiae_contig6390.15058.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6390 7534..10470 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816705.150476-UTR-L-elsbetiae_contig6390:7466..75331622816705.150476-UTR-L-elsbetiae_contig6390:7466..7533Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6390 7467..7533 +
1691683753.3910072-UTR-L-elsbetiae_contig6390:7466..75331691683753.3910072-UTR-L-elsbetiae_contig6390:7466..7533Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6390 7467..7533 +
1622816705.2016647-UTR-L-elsbetiae_contig6390:10470..107011622816705.2016647-UTR-L-elsbetiae_contig6390:10470..10701Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6390 10471..10701 +
1691683753.435741-UTR-L-elsbetiae_contig6390:10470..107011691683753.435741-UTR-L-elsbetiae_contig6390:10470..10701Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6390 10471..10701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816705.165717-CDS-L-elsbetiae_contig6390:7533..80041622816705.165717-CDS-L-elsbetiae_contig6390:7533..8004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 7534..8004 +
1691683753.405379-CDS-L-elsbetiae_contig6390:7533..80041691683753.405379-CDS-L-elsbetiae_contig6390:7533..8004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 7534..8004 +
1622816705.1809902-CDS-L-elsbetiae_contig6390:9164..94491622816705.1809902-CDS-L-elsbetiae_contig6390:9164..9449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 9165..9449 +
1691683753.4160295-CDS-L-elsbetiae_contig6390:9164..94491691683753.4160295-CDS-L-elsbetiae_contig6390:9164..9449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 9165..9449 +
1622816705.191317-CDS-L-elsbetiae_contig6390:10254..104701622816705.191317-CDS-L-elsbetiae_contig6390:10254..10470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 10255..10470 +
1691683753.4262464-CDS-L-elsbetiae_contig6390:10254..104701691683753.4262464-CDS-L-elsbetiae_contig6390:10254..10470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6390 10255..10470 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6390.15058.1

>prot_L-elsbetiae_contig6390.15058.1 ID=prot_L-elsbetiae_contig6390.15058.1|Name=mRNA_L-elsbetiae_contig6390.15058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MPWNCGHQDCDKGPCGGVHLLTPASELAALAEPTGVDLMDRHHLNRYDSE
SRRTLKKGFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPI
QQLSMVLLRRSFLIRKRVTIAGGAANANEGEEGPPVLPDVPMANQTTNKF
SPAYAKKAKQIAKRPRPPSDDDEEGAAKAFSSAPAPSPPLDLKSAVKPLI
SQLVAMKWPGWSNPFMTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKY
TTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLE
DLAQQAAGGSGGSGQVDKKQRIL*
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mRNA from alignment at L-elsbetiae_contig6390:7467..10701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6390.15058.1 ID=mRNA_L-elsbetiae_contig6390.15058.1|Name=mRNA_L-elsbetiae_contig6390.15058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3235bp|location=Sequence derived from alignment at L-elsbetiae_contig6390:7467..10701+ (Laminarionema elsbetiae ELsaHSoW15)
GCCAGGCTCGGTTGGCATCCACACTGTACTGCTGCGTGGAGAGGGGAGAG
AGAAGGGGGCGAAGGGGATGCCTTGGAACTGTGGCCATCAAGACTGCGAC
AAGGGTCCATGCGGTGGCGTCCACCTGCTCACTCCAGCCTCGGAGCTTGC
AGCACTAGCAGAACCGACCGGGGTTGACCTGATGGATCGCCACCACCTGA
ACCGCTACGACTCAGAAAGTCGGCGCACGCTCAAGAAGGGTTTCTCGCAC
TTCCTCTCTCCGCAGCTTCAGGCGCTTATCAAGGAAAAACCACGCGTTGC
GCTGTCAGAGAAGGCAGATTTTGCGGAGCTCTTGGCGGAAGAGCCTTCGG
CGAGCCCATGGCCTATCCAGCAGCTGTCGATGGTTCTGCTACGGCGATCG
TTCTTGATTCGGAAGAGGGTCACCATTGCTGGGGGCGCGGCCAATGCTAA
CGAAGGAGAGGAAGGACCGCCCGTGCTGCCAGACGTGCCGATGGCGAATC
AAACGACGAACAAATTCTCTCCCGCCTACGCCAAGAAGGTACAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGTACAGCTCGGGGCTGCTGTGTGC
ACTACTAGTGTGCACCACCAGCAGCGTGTTGCAGCGGCATACACACCCAC
GGAGAAGAATACCGTAGGTGACACAAGATAGCACACCCCCTGGACCGAGT
TTTAGAGCCCCTTTAGTCCGTAACGAAGAGGGTGCAAGCACCAAACAGGC
ACATTTTCGTACAGCCTGTTGTGTAACTCTGTGCAATGGGCATCGGGTGC
CAAAGATCAAATGACCGCAAAGCTGAGAAGCTCGGGATCATGGGGAGATA
TGTACAAGAATTCCCCGCCGCGGATGCTATCCGCCGAACACGCAAGAAGA
AGAGCGTTTTTAGCTCAAGAGGGTCTGATAACCCCTATGCATTTAGATCA
CAAGACAGTTGAATGATCTGATAATCATCCACGTCAGGCACGGAGCCTTA
TATGTAGGCCACTCTGATAAGCGACTCTACCTTCGGCACGCACTACGATA
ACCGGAACTCTCTCACTGCTGATCTGATAATCAGAGGAATTTAGATAGGG
ACGATGCCCGGGGCCTGATAGCCGACAATGAAACTGGTATTTACACTCAC
ATAGACATCGGACACCGAACACACGACGACTCACTCTGGCCCCCAACACG
GCGCACTGAACAGCGCGGGCCAAAGAGACATCCTGGAAACAAGAACCAGA
GGCAGGTGGTACCTCCGATCCAATTCATCACACACGCGGAACCCTCGGAT
TCCCCCGCATCATGCTTGCAACAATCTGGCCATGCGTGAGTATTCACAAC
ACAGCCGTCGACTAGATCTTTCCAACGTCACCCCTTTCGGCACTGGCACT
CTCCTTCCTGGGGAGGAAGGAGGAATCGAGCTTTGAAAAACTGTCCAGGG
GGGTGTGGTATCTTTTGTCACCTACGGTAGGCCCCTATTCCTGCCTCGTG
GGCTACTTGCTCTTTGGGCTTGCACGAGCACCAGGAGAGACGTGCAACCG
TTCGGCCGTTTTTTTATTGACACCCACGTTACGCCCTAAGTTTACATATT
TTGCACCCAGCGCAGATACAGACCAGGGTACATATGCTCAATACGCCGCT
CCCGGTTTCTGTGTAACCGCTCGCTCTCCGTACAACATACACCAGCAGGC
CAAACAAATCGCGAAGCGACCAAGGCCCCCAAGCGACGATGACGAGGAAG
GAGCAGCGAAAGCTTTCTCGTCTGCACCTGCACCTTCGCCGCCCCTCGAC
TTGAAGTCCGCCGTGAAGCCGCTGATCTCCCAGCTCGTGGCGATGAAGTG
GCCCGGCTGGAGCAACCCCTTCATGACTGTCTTCAAGAAGAGCAACGCGC
CGCCTCGGTACTTCGAGTTCATCAAGAGGCCGATGAACCTCACGTTTATC
AGAGACAATCTGAACAAGAACAAATACACAACGGTGAGTGCATCGTTGAT
AGTTTAATTTACACCCCCTTTTTCACGCCATTCACGCCCTGGGGGGGGGG
GGGTACGTAAAAGAACGGTGCTCGGGTTGGTCATCGGCCACGTAGATGAC
TAGTATTATTTTACTCTTTTTTTTTTTTTCGCTTTTTTTTTGGCGAGATC
GCTATGCTAAAAAAGGCCAGGTTGGTGAAGTGAAAAGAACCAACATACCT
GTAGCTGCTGTGCCTACCCGAGGGTGTGGAACAAAGAATGACGCGAATCG
ATGTTCCAGTCGCGGAGTATGGATTATTTCGGACGACCCGCACTTGTCCG
AGTGACCTCGCAGTCGAAACCACGCCCTGCTCTTGCCGATGTGTGTAGTT
TCCTAGCAGATCTCAACGCTCTGTTGACGCAAAAAATCGTGCTGCAGTCT
GCCTCCCAACTGGCTCCCTCTCTCGCCTTCGTCTCTCTCTTCCCTATCTA
ATTTCTATCTAATTTCTGCGATGCCAAGGGTGAGTAGTGCTTGCAGAAAC
TACCCCCCAAACGTTTGGCCATCTCTAAAAGTCACACATCTCAACTACAC
AGCAGTCTCAAAGTCGCGTTTTATCCGCTTCTCCGTGCCTGGGTGTGCAC
CGGGGGCCTGCCTATGCTCAGCTGTCCCAGGATATCCCGCCTCAAAACAA
ATCCACCCGGGTACCGATGTGCCTCCTTAAAAACCAGGAGTCAAATAACA
CTGCTACTACTGTGACTAGAGGAAACTTCACGCTATGTACATACAAGTGT
GGCGAAACGAGGCACACACCCTCCTCCCGTTCCCGCAGGTGGCCGAGATT
GAGGCGGATCTGGAACTCGTCGTGAACAACGCCCTCACGTTCAACCGACC
GCACGACCCGGTGTACCAATTCGCCCTCGACCTGCGGTCGGCTTTTCGTA
GCGAGCTACCCCATGTCAAGCGAACTCTCGAAGATCTAGCGCAGCAAGCG
GCCGGGGGCAGTGGCGGCAGCGGGCAGGTCGACAAGAAGCAACGGATCCT
ATGACTTCCGTGTTTTTTTTTGGGGTGCTGTGCTGTGTGGTGCCGTGTGG
TGTGTGGTTGGAGTCGTTTGCTTTTGCACGGCGGACTCCTCTTTCCCGGG
GTGTGTTGTGTCTACTGCTGCTGTGGTCCCCGGAGCCCACCAAGATGTTT
TGAGTTGTATTTCCCTGTCTGGCATCGTATTTTTATGTCCACATCGGTGT
TTGTTCGGTGGTTTTGTTCTGTAAATACTCGCGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6390:7467..10701+

>mRNA_L-elsbetiae_contig6390.15058.1 ID=mRNA_L-elsbetiae_contig6390.15058.1|Name=mRNA_L-elsbetiae_contig6390.15058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1944bp|location=Sequence derived from alignment at L-elsbetiae_contig6390:7467..10701+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTTGGAACTGTGGCCATCAAGACTGCGACAAGGGTCCATGCGGTGG
CGTCCACCTGCTCACTCCAGCCTCGGAGCTTGCAGCACTAGCAGAACCGA
CCGGGGTTGACCTGATGGATCGCCACCACCTGAACCGCTACGACTCAGAA
AGTCGGCGCACGCTCAAGAAGGGTTTCTCGCACTTCCTCTCTCCGCAGCT
TCAGGCGCTTATCAAGGAAAAACCACGCGTTGCGCTGTCAGAGAAGGCAG
ATTTTGCGGAGCTCTTGGCGGAAGAGCCTTCGGCGAGCCCATGGCCTATC
CAGCAGCTGTCGATGGTTCTGCTACGGCGATCGTTCTTGATTCGGAAGAG
GGTCACCATTGCTGGGGGCGCGGCCAATGCTAACGAAGGAGAGGAAGGAC
CGCCCGTGCTGCCAGACGTGCCGATGGCGAATCAAACGACGAACAAATTC
TCTCCCGCCTACGCCAAGAAGATGCCTTGGAACTGTGGCCATCAAGACTG
CGACAAGGGTCCATGCGGTGGCGTCCACCTGCTCACTCCAGCCTCGGAGC
TTGCAGCACTAGCAGAACCGACCGGGGTTGACCTGATGGATCGCCACCAC
CTGAACCGCTACGACTCAGAAAGTCGGCGCACGCTCAAGAAGGGTTTCTC
GCACTTCCTCTCTCCGCAGCTTCAGGCGCTTATCAAGGAAAAACCACGCG
TTGCGCTGTCAGAGAAGGCAGATTTTGCGGAGCTCTTGGCGGAAGAGCCT
TCGGCGAGCCCATGGCCTATCCAGCAGCTGTCGATGGTTCTGCTACGGCG
ATCGTTCTTGATTCGGAAGAGGGTCACCATTGCTGGGGGCGCGGCCAATG
CTAACGAAGGAGAGGAAGGACCGCCCGTGCTGCCAGACGTGCCGATGGCG
AATCAAACGACGAACAAATTCTCTCCCGCCTACGCCAAGAAGGCCAAACA
AATCGCGAAGCGACCAAGGCCCCCAAGCGACGATGACGAGGAAGGAGCAG
CGAAAGCTTTCTCGTCTGCACCTGCACCTTCGCCGCCCCTCGACTTGAAG
TCCGCCGTGAAGCCGCTGATCTCCCAGCTCGTGGCGATGAAGTGGCCCGG
CTGGAGCAACCCCTTCATGACTGTCTTCAAGAAGAGCAACGCGCCGCCTC
GGTACTTCGAGTTCATCAAGAGGCCGATGAACCTCACGTTTATCAGAGAC
AATCTGAACAAGAACAAATACACAACGGCCAAACAAATCGCGAAGCGACC
AAGGCCCCCAAGCGACGATGACGAGGAAGGAGCAGCGAAAGCTTTCTCGT
CTGCACCTGCACCTTCGCCGCCCCTCGACTTGAAGTCCGCCGTGAAGCCG
CTGATCTCCCAGCTCGTGGCGATGAAGTGGCCCGGCTGGAGCAACCCCTT
CATGACTGTCTTCAAGAAGAGCAACGCGCCGCCTCGGTACTTCGAGTTCA
TCAAGAGGCCGATGAACCTCACGTTTATCAGAGACAATCTGAACAAGAAC
AAATACACAACGGTGGCCGAGATTGAGGCGGATCTGGAACTCGTCGTGAA
CAACGCCCTCACGTTCAACCGACCGCACGACCCGGTGTACCAATTCGCCC
TCGACCTGCGGTCGGCTTTTCGTAGCGAGCTACCCCATGTCAAGCGAACT
CTCGAAGATCTAGCGCAGCAAGCGGCCGGGGGCAGTGGCGGCAGCGGGCA
GGTCGACAAGAAGCAACGGATCCTATGAGTGGCCGAGATTGAGGCGGATC
TGGAACTCGTCGTGAACAACGCCCTCACGTTCAACCGACCGCACGACCCG
GTGTACCAATTCGCCCTCGACCTGCGGTCGGCTTTTCGTAGCGAGCTACC
CCATGTCAAGCGAACTCTCGAAGATCTAGCGCAGCAAGCGGCCGGGGGCA
GTGGCGGCAGCGGGCAGGTCGACAAGAAGCAACGGATCCTATGA
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