mRNA_L-elsbetiae_contig639.15055.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: D7G1U2_ECTSI (Glycine cleavage system H protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U2_ECTSI) HSP 1 Score: 268 bits (684), Expect = 4.460e-89 Identity = 138/170 (81.18%), Postives = 151/170 (88.82%), Query Frame = 1 Query: 100 MASVAVARFGGAMRSSGAAMRTMRTMAGPSP-LARAGWIAGG-GNKRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVPDTLLDPAAYEALCEES 603 MASVAVARF GA+RS GAA+RTMR GPSP LAR GW+A G GNKRCMSTVYAESHEYLT +GDT VGITAFAAKALGD+VFVDLPEVGDE EAGDSFGSVESVKAASDVY+P SGEVLEVN ALT++PGILNEDPMGKGWF+KIK+T+ PDTL+DPAAYE CE+S Sbjct: 1 MASVAVARFSGALRS-GAAVRTMRAFTGPSPSLARTGWLAAGAGNKRCMSTVYAESHEYLTVEGDTAKVGITAFAAKALGDVVFVDLPEVGDELEAGDSFGSVESVKAASDVYSPASGEVLEVNEALTESPGILNEDPMGKGWFIKIKMTEPAPDTLMDPAAYETHCEDS 169
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A7S2BEF1_9STRA (Glycine cleavage system H protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BEF1_9STRA) HSP 1 Score: 158 bits (399), Expect = 8.080e-46 Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 232 RCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCEE 600 R +ST YAESHEY+ +GD GTVGITA AA ALGDIVFVDLP+VG EF+ DSFG+VESVKAASDVY+P+ GEV+EVN L D P +N+ PM GWFMKIK++D + L+D AAYE C E Sbjct: 42 RPLSTYYAESHEYVKVEGDIGTVGITAHAADALGDIVFVDLPDVGSEFKQTDSFGTVESVKAASDVYSPIDGEVVEVNEVLEDEPETVNDSPMEHGWFMKIKMSDSSQLEGLMDDAAYEKFCVE 165
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A7S2WUU3_9STRA (Glycine cleavage system H protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUU3_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.210e-45 Identity = 75/127 (59.06%), Postives = 98/127 (77.17%), Query Frame = 1 Query: 220 GGNKRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCE 597 GG R ST +AESHEY+ DGD GT+GITA AA+ALGDIV+VDLP+ G ++E +SFGSVESVKAASDVY PV+GEV+EVN L+D+P ++NE P+ GWF+KIK++D + L+D AY+ C+ Sbjct: 44 GGLARPFSTYFAESHEYIKMDGDVGTIGITAHAAEALGDIVYVDLPDEGSDYEQKESFGSVESVKAASDVYVPVAGEVVEVNEELSDSPSLVNESPLEDGWFVKIKVSDKSQLEGLMDEGAYKTFCD 170
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A1V9ZWQ1_9STRA (Glycine cleavage system H protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWQ1_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.290e-44 Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 229 KRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVPDT-LLDPAAYEALCE 597 +R ST Y HEYLT GD GT+GIT FA ALGD+V+VDLP++G++F GDSFGSVESVKAASDVY PVSGEV+ +N L D+P ++NE P+ GWF+KIK++D T LLD AY+ CE Sbjct: 14 RRAFSTKYTPQHEYLTIKGDEGTIGITDFAQNALGDVVYVDLPKIGEKFSKGDSFGSVESVKAASDVYVPVSGEVIAINENLVDSPNLVNESPLEDGWFIKIKLSDAAEATELLDEEAYKTHCE 137
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A836CGJ1_9STRA (Glycine cleavage system H protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ1_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.330e-43 Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 229 KRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCEESK 606 +R S +AESHEY+ DGD GT+GIT FAA LG++VFV+LPEVG F+ DSFGSVESVKAASDVY PV GE+ VN L+++ ++N DPMG GWF KIKI D +L+D AAY+A CE+SK Sbjct: 37 RRWASYHFAESHEYVKVDGDVGTIGITQFAADNLGEVVFVELPEVGATFDKTDSFGSVESVKAASDVYMPVGGEITSVNEELSESQELVNNDPMGDGWFAKIKIADKGELASLMDEAAYKAFCEDSK 163
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A7R9Z823_9STRA (Glycine cleavage system H protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z823_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.840e-42 Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 223 GNKRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCEE 600 G+ R ST + +HEY+ + GT GIT FA ALGDIVFVDLPEVGDEFE GDSFGSVESVKAASDVYAPVSGE++EVN LTD PG++N G WF+KIK+TD+ D L+ Y+ CE+ Sbjct: 30 GSFRFASTHFTPAHEYVKVEDGVGTCGITDFAQAALGDIVFVDLPEVGDEFEKGDSFGSVESVKAASDVYAPVSGEIVEVNETLTDEPGLVNTAAEGDAWFIKIKVTDESELDDLMTSDMYKEHCEK 156
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A7S2V4N2_9STRA (Glycine cleavage system H protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N2_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.370e-42 Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 238 MSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCEES 603 ST YA SHE++ DGD GTVGITA AA LGD+V+V+LP+ G +F G+SFGSVESVKAASDVY PVSGE++ N AL+DTPG +NE G GWFMKIK++D D L+D AY+ C+ S Sbjct: 34 FSTKYAPSHEWIKVDGDIGTVGITAHAADQLGDVVYVELPDEGADFSKGESFGSVESVKAASDVYTPVSGEIVAANEALSDTPGTVNESAEGDGWFMKIKLSDPSELDDLMDLEAYQKHCDSS 156
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A1T4WD05_9DELT (Glycine cleavage system H protein n=2 Tax=Paucidesulfovibrio TaxID=2910985 RepID=A0A1T4WD05_9DELT) HSP 1 Score: 147 bits (371), Expect = 3.810e-42 Identity = 70/120 (58.33%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 247 VYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVPDTLLDPAAYEALCEESK 606 +YA+SHE++ DGDT TVGIT FA + LGDI FV+LP+VGD F+ GD FGSVESVKAAS++Y+P+ GE++ VN AL D P +NEDP+G+GW +K+K+ P+ LLD AAY+AL E + Sbjct: 7 LYAKSHEWVKVDGDTATVGITDFAQQQLGDITFVELPDVGDTFDQGDEFGSVESVKAASELYSPICGEIVAVNDALEDAPEKVNEDPLGEGWLLKLKVAQ-APEGLLDYAAYQALVESEE 125
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A7S2M5Z8_9STRA (Glycine cleavage system H protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5Z8_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.280e-42 Identity = 88/168 (52.38%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 100 MASVAVARFGGAMRSSGAAMRTMRTMAGPSPLARAGWIAGGGNKRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITDDVP-DTLLDPAAYEALCEE 600 MAS ++ RS AMR+ S L+ A G+ R M+T Y +HEY DG+ TVGIT FA ALGDIVFVDLPE DEFEA DSFGSVESVKAASDVYAPVSG+VLEVN ALTD P ++N + WF+K++ITD+ L+ AY+ CE+ Sbjct: 1 MASASIMLANATRRSVFQAMRSS------SRLSTAVTSPSFGSARFMATYYTPAHEYCKVDGNVATVGITDFAQAALGDIVFVDLPEPDDEFEAKDSFGSVESVKAASDVYAPVSGKVLEVNEALTDEPALVNTSAEDEAWFIKLEITDESELSGLMGADAYKEHCEK 162
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Match: A0A1V9YH61_9STRA (Glycine cleavage system H protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH61_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.250e-41 Identity = 74/124 (59.68%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 229 KRCMSTVYAESHEYLTKDGDTGTVGITAFAAKALGDIVFVDLPEVGDEFEAGDSFGSVESVKAASDVYAPVSGEVLEVNAALTDTPGILNEDPMGKGWFMKIKITD-DVPDTLLDPAAYEALCE 597 +R +T + HEYL +G TVGIT FA ALGDIV+VDLP VG +F GDSFGSVESVKAASDVYAP SGEV+ +N ALT +P ++NE P+ GWFMKIK+T+ + LLD AAY CE Sbjct: 15 RRAFATKFTPEHEYLNINGGEATVGITDFAQNALGDIVYVDLPSVGQKFAKGDSFGSVESVKAASDVYAPASGEVIAINEALTSSPELVNESPLVDGWFMKIKLTNPSETEELLDEAAYATHCE 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig639.15055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig639.15055.1 >prot_L-elsbetiae_contig639.15055.1 ID=prot_L-elsbetiae_contig639.15055.1|Name=mRNA_L-elsbetiae_contig639.15055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp MASVAVARFGGAMRSSGAAMRTMRTMAGPSPLARAGWIAGGGNKRCMSTVback to top mRNA from alignment at L-elsbetiae_contig639:2167..7550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig639.15055.1 ID=mRNA_L-elsbetiae_contig639.15055.1|Name=mRNA_L-elsbetiae_contig639.15055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5384bp|location=Sequence derived from alignment at L-elsbetiae_contig639:2167..7550+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig639:2167..7550+ >mRNA_L-elsbetiae_contig639.15055.1 ID=mRNA_L-elsbetiae_contig639.15055.1|Name=mRNA_L-elsbetiae_contig639.15055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig639:2167..7550+ (Laminarionema elsbetiae ELsaHSoW15)back to top |