prot_L-elsbetiae_contig638.15045.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig638.15045.1
Unique Nameprot_L-elsbetiae_contig638.15045.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length752
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig638.15045.1 vs. uniprot
Match: D8LBP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP2_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 7.900e-55
Identity = 241/589 (40.92%), Postives = 272/589 (46.18%), Query Frame = 0 
Query:  165 MACMLYFRKKTKGGGKRATVLKPKTDIAGHTDKVVTAVGEEA--ETPLVDALAMRKETDVAGPQPPANSARPALAPFGSVGGTAAPVNTTRTTPPVAKTAPPPIAPXXXXXXARVGPSSPFSAGMERQLDMFVMSRPEDGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEQLKASRRAALARVASQKXXXXXXXXXXXXXXXXXXXXXXAEAAKRADALRSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERVEAVLAYDEARADEREKQVRNETYARIRREERRRELALRRQEDERAEKMRLYEGGGRYNAGAS-STPASVPPPAVQSARSFFSITGSASVSDSAAVGGDCGPATVSSAPWDKPKSRNRKTWRRAGSGHAQEAADALTGALSSRESAHAVVQEGNELHVLESNQQPPPQATQQTRTIPGPCGNSSSSSRSGTSSRLEALPPPSPDAGCSAGCFGTPXXXXXXXXXXXXXXXLRNPRLSPTRRRGYSGGARSDASTATSAGPGGRKSSGSSGRKV-VHDRRRIATTPVWKRPAVPLSKPYVAVPKKENG 749
            M CMLY RKK +           K    G T +V  A+GE    E P   ALA  K      P PP  SA  A APFGSVG T  P  T          APP             GP SPFSAGMER+LD+FVMSRP+D  G                                                      E+LKASRRAALAR ASQ    XXXXXXXXXXXXXXXXXXX               X                           RERV AVLAYDEA+ADERE++VRNETYARIRREERRRELAL+RQEDER E MR+YE G RY   +  +T    P PAV SARSFFSIT SAS++++  V GD GP   SSA      SR RKTWRR    H +E  DAL GA S+   A  V +   EL  L+S    P QA QQ  T                                                        + P LSPTR    S  ARS +++AT+       + GS  RK     RRRI+TTPVWKRPAVPLSKPYV VP+K+ G
Sbjct:    1 MECMLYLRKKARKKKVMTATTHVKDSATGQTGRVA-ALGESGKEEAPCAAALAPSKVECSFTPVPPPQSATMAPAPFGSVGETPKPAVTMS----AGDRAPP---------SRTTGPPSPFSAGMERELDVFVMSRPKDKSGMSSAVVLEAQRRARRRALSMQKRKTAEEERKAGALESAKKPPTVADI-------ERLKASRRAALARAASQIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSIVAAEKKQRERQLGLVRQAEAEAKRERVAAVLAYDEAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERYKGTSPVATVLPAPVPAVHSARSFFSITDSASIAET--VVGDNGPGVASSA------SRRRKTWRRVDPDHIEEVQDALEGACSNSGGAQDVRKA--ELDALKSTHHQP-QANQQGSTPAQHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDDDSGEMVTVSRRLRKPPLLSPTRPSFSSRYARSASASATTGVAA--SAYGSRNRKQGALGRRRISTTPVWKRPAVPLSKPYVPVPQKDTG 555
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig638.15045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBP2_ECTSI7.900e-5540.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 471..491
NoneNo IPR availableCOILSCoilCoilcoord: 419..446
NoneNo IPR availableCOILSCoilCoilcoord: 369..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig638contigL-elsbetiae_contig638:17531..20801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig638.15045.1mRNA_L-elsbetiae_contig638.15045.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig638 17531..20801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig638.15045.1 ID=prot_L-elsbetiae_contig638.15045.1|Name=mRNA_L-elsbetiae_contig638.15045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=752bp
PPCSSRRLNPQEHSPSPGGDGSKNLELGNMSLIDRARALCAAADDVQRAT
IEASRRIAAIHGSPKRPQKKKKPTAPTKEPPDICARPPSDVPPPRGEGWR
RLGPVSVVCGSNRISAPPQTSRRALTRDVEVSVDGSCYSVVPADIDPGGG
FCVSLDRDFAGETNMACMLYFRKKTKGGGKRATVLKPKTDIAGHTDKVVT
AVGEEAETPLVDALAMRKETDVAGPQPPANSARPALAPFGSVGGTAAPVN
TTRTTPPVAKTAPPPIAPAPAPAPARVGPSSPFSAGMERQLDMFVMSRPE
DGYGGGGGGGGGSSAIVRGAQRRARRRAFVEQKRKAAADERNLEDSESAK
QPPTAAATEQLKASRRAALARVASQKQKAEARRQQEEVKSDEDRRKREAE
AAKRADALRSVAAARASAAAAEKRQRERERELARSAEAEAKRERVEAVLA
YDEARADEREKQVRNETYARIRREERRRELALRRQEDERAEKMRLYEGGG
RYNAGASSTPASVPPPAVQSARSFFSITGSASVSDSAAVGGDCGPATVSS
APWDKPKSRNRKTWRRAGSGHAQEAADALTGALSSRESAHAVVQEGNELH
VLESNQQPPPQATQQTRTIPGPCGNSSSSSRSGTSSRLEALPPPSPDAGC
SAGCFGTPPQQGGGGEAAIGGGGLRNPRLSPTRRRGYSGGARSDASTATS
AGPGGRKSSGSSGRKVVHDRRRIATTPVWKRPAVPLSKPYVAVPKKENGR
L*
back to top