mRNA_L-elsbetiae_contig638.15044.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A6H5KPI6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPI6_9PHAE) HSP 1 Score: 651 bits (1680), Expect = 1.230e-215 Identity = 443/679 (65.24%), Postives = 485/679 (71.43%), Query Frame = 1 Query: 1033 AVVKVDGSREVPRFLRPVMVLLALSLLAISG------------NRLFQAFRGGGAGGEGWSGGLVLFGPAAYAAGGVQLPEAVVDDIFERADKDNDGVIGDEEIQFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGPEGERDGGWVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDVVVATEDCALGG-SWFWSPGGGGRGGADSAEAS--LGGLVLATAVSVAAAFCFRALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPEARLAVAGTATGKSAVSDGSAA---GGNGRGAGSPTRLGRSGGSGRGDADREMIEQPRRRLSGSGVSCKPSSSSARLVASSKEGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITGRLSSARSSTGASVGESVRKERARRLQIASRHHSSSRDEREVCKECYKEWRWYRPGKHTCCKCHEQFCDRKGCGLATHSFGACPVGGSCMCSSCLDLGAGGGRRGLPSPAASRSFD 3015 A K G REVPRFLRPVMVLL LSLLAI G LFGPAAYAAGGVQLPEAVVDDIFE ADKD +GVIGDEEIQ+LVERAGGS LDDASEIEAGV SVIKNLDRNADHALSRSDLN YWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLG+TRPAFKRNLVRSMQWKLWGMGEEPAAP GLRA SS+CGAVSL+WDQT P+NS LSFPVHK+VLRRA LG EGERDGGWVTVMAGP G FFDAGL+PGAAYRYALQAWNALGHS SVE+DVV ++EDCA G SWFWSPGGG +GGLV+ATAV+VA A C RAL XXXXXXXXX XXXXXXXXXXXXXXXXXXX R + A+ GTA G SA++ + + G RG S + S GSG GD +R +PR ++ GSG S +P SS +KE LR XXXXXXXXXXXXXXXXXX G++ A++G+SVR+ERA+R+ + HSSSRD+++VCKEC KEWRWYR GKHTCCKCHEQFCDRK CG +H+FGACPVGG+CMCSSCL LG GRR P S SFD Sbjct: 3 AATKNSGDREVPRFLRPVMVLLTLSLLAIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGPAAYAAGGVQLPEAVVDDIFEHADKDKNGVIGDEEIQYLVERAGGSRLDDASEIEAGVASVIKNLDRNADHALSRSDLNVYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRAT--SSACGAVSLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGGTFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCAPGRTSWFWSPGGGXXXXXXXXXXXXXVGGLVVATAVTVAVASCLRALSXXXXXXXXXXVRRGASGDVVGSXXXXXXXXXXXXXXXXXXXRRESERM--------RQQPGAAITGTA-GNSAMAAAAVSDRDGDKSRGGASSPKSVHSNGSGWGDRERA---EPRTKMLGSG-STRPVSSRR-----TKERLRRASSDVSPPXXXXXXXXXXXXXXXXXXLARAGVSS----------AAIGDSVRRERAKRMMMYG--HSSSRDDKDVCKECGKEWRWYRRGKHTCCKCHEQFCDRKECGSHSHAFGACPVGGTCMCSSCLQLG---GRRSFPL-LGSMSFD 645
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S4V3N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3N0_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.790e-41 Identity = 97/281 (34.52%), Postives = 146/281 (51.96%), Query Frame = 1 Query: 1237 EAVVDDIFERADKDNDGVIGDEEI-QFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLG---PEGER-----DGG-----------------------WVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDV 1983 EA F D+D DG++ E+ FL E GG+ D +E+E GV +++ LDRN D L +SD+ YW L +LL DE A WV+HA QLP+ + + F NMVTGYDFPEL G + +LG+ R +F++ +VR + ++ G+G P P+ ++ + SC V++ WD+++ FPVH Y ++R +G +G R D G W T+ G F D+GL G Y Y +QAWN++G S+ +D+ Sbjct: 134 EASAFSFFSSVDEDGDGMLEPPEVANFLRESIGGTAFDTQAEVETGVNKIMEKLDRNHDLGLDKSDVEAYWKHLESLLNADEVADWVVHAVQLPEYLGNIFRENMVTGYDFPELVENDGEAIRTELGIERSSFRKKIVRHIHARMLGIGSTPTIPSEIK--HKLESCSTVNISWDRSTAEG----FPVHSYRIKRRAVGLHDGDGPRKVITLDAGPGTHHMVNSPSNVQSLSLPLASDWATIYVGGESEFVDSGLELGHNYVYRVQAWNSVGRSAWATVDI 408
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S4R8Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8Z4_9STRA) HSP 1 Score: 169 bits (428), Expect = 9.510e-40 Identity = 101/283 (35.69%), Postives = 146/283 (51.59%), Query Frame = 1 Query: 1237 EAVVDDIFERADKDNDGVIGDEEI-QFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGPEGERDGG---------------------------------WVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDV 1983 EA F D D DG++ +E+ FL E GGS D +E+EAGV V++ LDRN D L +SD++ +W +L +LL DE A WV++A QLP+ + + F N VTGYDFPEL G ++ +L + + +F+R L+ ++ +L G+G P P+ ++ SSS VS WD++S SFPVH Y ++R +G + DG WVTV G F D+GL G Y Y QAWN++G S V +D+ Sbjct: 110 EASAFSFFRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTPTVPSKMKYKLESSST--VSFSWDKSSAE----SFPVHIYRIQRRDVGLHHDGDGTRKVVNHLAARPRTHQTADPPSTVQRLSSPSTSEWVTVYVGGECEFVDSGLELGHNYVYRAQAWNSIGRSDWVTVDI 386
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: B8C5W8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W8_THAPS) HSP 1 Score: 153 bits (386), Expect = 8.920e-34 Identity = 92/268 (34.33%), Postives = 143/268 (53.36%), Query Frame = 1 Query: 1249 DDIFERADKDNDGVIGDEEI-QFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPL-----GPEGERD-----------------GGWVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDV 1983 D F D D+DG++ EE+ FL ++ GGS D S ++ V +V+K LD+N D + SD+ YW +L +LLT +E ++WV++A QLP+ V F+ N +TGYDFPE+ G +L +LG+ + +F+ +VR MQ ++ G+G P PT +C AVS W+++S +R+ FPVH Y ++R + G E + W TV G F D+ + G Y Y +QAWN++G S +D+ Sbjct: 81 DTFFHSLDSDHDGILEPEEVASFLKDQIGGSQFDTQSAVDKEVSTVMKRLDQNHD-GIEMSDVLDYWMQLESLLTAEEVSEWVVYAVQLPKTVGKIFLENGITGYDFPEIVENGGEVLLNELGIDKTSFRNKIVRQMQARMLGIGSIPDKPTQFYYKL--DNCKAVSFTWERSS---ARV-FPVHSYRIQRRAINLFENGSTNENNMPIANDFSMVTYPPVSTSDWKTVYVGGENEFVDSSVETGHNYIYRIQAWNSVGRSGWEVVDL 341
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S2KT34_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KT34_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.800e-32 Identity = 92/289 (31.83%), Postives = 138/289 (47.75%), Query Frame = 1 Query: 1270 DKDNDGVIGDEEI-QFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGP--------------------------EGE------------------------RDGGWVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDV 1983 D + DGV+ E+ F+ GGS D +E+ V+ ++ LD+N D L SD+ ++W +L ++LTVDE WVL+A QLP++VA+ FV + VTGYDFPEL G + +LG+ + +F++ L+RS+ KL G+G P P + + SC V+L W + + +SFPVH Y ++R + EG+ WVTV G + +F D+ L Y Y LQAWN +GHS D+ Sbjct: 127 DTNRDGVVKPNEMANFIRNSIGGSAFDTETEVNFEVERIMGELDQNQDENLDLSDVFSHWKQLESVLTVDEVKDWVLYAVQLPEKVANTFVEHSVTGYDFPELIENDGDAMRVELGIEKQSFRKKLLRSIHAKLLGIGSVPTTPPSFK--HNLESCSVVNLTWKKPAA----ISFPVHSYRVQRRAVSQRRPTRNNLDFCEEKRNEIDAVQDIFGEGKCNTYLSDKEAHEQNDKFISKEYSASSADWVTVYIGVDTSFLDSNLEHDHKYVYRLQAWNPIGHSPWATRDI 409
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S3V9U2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9U2_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.000e-31 Identity = 82/196 (41.84%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 1258 FERADKDNDGVIGDEE-IQFLVERAGGSLLDD-ASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGPEG 1839 F D+D DG I E I F++E GGS DD +E++ V ++KNLD N D L D+ +YW++L +LLTVDE A WV+HA QLP + D + VTGYDFPEL G L +L +T +F+ ++R MQ ++ G+G P P+G+ A S C A+ L WD+T FPVHKY + R +G G Sbjct: 221 FNFVDRDGDGKIRRPELIDFVMENIGGSDFDDEVNEVKPEVDRMMKNLDLNNDDGLDTGDVTSYWEKLESLLTVDEVADWVVHAVQLPSYIGDIVRDKHVTGYDFPELVEDNGKALVDELHITEKSFRTKIIRLMQARMLGIGSVPRKPSGIVATVES--CEAIKLTWDRTLADG----FPVHKYRVMRRTVGGGG 410
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S1B4T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4T7_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.720e-31 Identity = 88/267 (32.96%), Postives = 135/267 (50.56%), Query Frame = 1 Query: 1258 FERADKDNDGVIGDEEIQFLVERA-GGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPL------------GPEGER-------------------DGGWVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHS 1962 F D D+D I EE+ V + GG+ D EI++ V ++ K+LD N D +S D+ +W++L LLT DE A+WV +A QLP+ VA+ F +N VTG+DF EL G LE+ LG+ + F++ L+R ++ ++ G+G P + ++ ++ SC +VS WD+ FPVH Y ++R + G + + D W V G + F D GL G +Y Y +QAWNA+G S Sbjct: 57 FSAVDTDHDDTIDLEELSNFVGKVIGGTQFDTPLEIQSEVNAMFKSLDLNHDKRISFKDVKEHWNKLECLLTADEVAEWVKYAVQLPENVANTFRDNAVTGFDFSELVVNNGEALERYLGIEKELFRKKLLRLIKARMLGVGTVPDSVLNIK--HSVDSCSSVSFTWDKPIA----RGFPVHSYRIQRRAIMKVPRFIAVDSTGAQNKSVDLDATPNESTVVAQIKLSDENWADVFIGADTEFVDTGLELGYSYIYRIQAWNAVGRS 317
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A7S4R7C1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7C1_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.140e-31 Identity = 90/277 (32.49%), Postives = 137/277 (49.46%), Query Frame = 1 Query: 1258 FERADKDNDGVIGDEEIQ-FLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNT-YWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGPEGERDGG---------------------------------WVTVMAGPNGAFFDAGLRPGAAYRYALQAWNALGHSSSVEIDV 1983 F D+D+DG++ ++++ FL + GG D +E+EAGV V++ LD +W +L +LL DE A WV++A QLP+ + + F N VTGYDFPEL G ++ +L + + +F+R L+ ++ +L G+G P P+ ++ SSS VS WD++S SFPVH Y ++R +G + DG WVTV G F D+GL G Y Y QAWN++G S V +D+ Sbjct: 244 FRSVDQDDDGMLDPQDLEHFLWKSIGGPAFDTHAEVEAGVNKVMEKLDXXXXXXXXXXXXXXXFWVQLESLLNADEVADWVIYAVQLPEYMGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTPTVPSKMKYKLESSST--VSFSWDKSSAE----SFPVHIYRIQRRDVGLHHDGDGTRKVVNHLAARPRTHQTADPPSTVQRLSSPSTSEWVTVYVGGECEFVDSGLELGHNYVYRAQAWNSIGRSDWVTVDI 514
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: D8LHW7_ECTSI (FYVE zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW7_ECTSI) HSP 1 Score: 141 bits (355), Expect = 4.480e-30 Identity = 87/241 (36.10%), Postives = 129/241 (53.53%), Query Frame = 1 Query: 1258 FERADKDNDGVIGDEEIQFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAPTGLRAANASSSCGAVSLDWDQTSPSNSRLSFPVHKYVLRRAPLGPEGERDGGWVTVMAGPNGA----FFDAGLRPGAAYRYALQAWNALGHSSS 1968 F D+++DGV+ + EI+ V GGS LDD SEI GV +V+ LD ++D + +L+++ +RLG +LTV+EAA WV HA QLP+EVA+AF +N ++ YDFPEL GA L DLG+ R F++ +V++++ +L G+G+EP P L P GG +A +G+ F D+GL PG Y Y ++AWN +GHS + Sbjct: 145 FNSLDENSDGVLAENEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSDKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEPPLPV-----------------------------------------LHPPSYLGGGKADDVASVSGSSSFVFVDSGLSPGKTYVYRVRAWNLIGHSEA 342
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Match: A0A6H5L898_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L898_9PHAE) HSP 1 Score: 129 bits (325), Expect = 2.060e-26 Identity = 89/234 (38.03%), Postives = 135/234 (57.69%), Query Frame = 1 Query: 1048 DGSREVP-------RFLRPVMVLLALSLLAISGNRLFQAFRGGG------AGGEGWSGGLVLFGPAAYAAG---GVQLP-EAVVDDIFERADKDNDGVIGDEEIQFLVERAGGSLLDDASEIEAGVKSVIKNLDRNADHALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGVTRPAFKRNLVRSMQWKLWGMGEEPAAP 1698 DG RE+ R+ +P ++ A+ G +A GG AGGEG G A A G GV+ P ++ F D+++DGV+ ++EI+ V GGS LDD SEI GV +V+ LD +++ + +L+++ +RLG +LTV+EAA WV HA QLP+EVA+AF +N ++ YDFPEL GA L DLG+ R F++ +V++++ +L G+G+EP P Sbjct: 86 DGRRELDVAARVAARWPKPSGRKQPVATAALDGGEADEASSGGSWGFDRNAGGEG--------GGDARARGWQYGVRKPRQSEAATFFNSLDENSDGVLAEDEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSEKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEPPLP 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig638.15044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig638.15044.1 >prot_L-elsbetiae_contig638.15044.1 ID=prot_L-elsbetiae_contig638.15044.1|Name=mRNA_L-elsbetiae_contig638.15044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=969bp MPDAGVQVDFEADDYPEGDGASSVGSTGDEADTARRSGRVGAGGSGGGRMback to top mRNA from alignment at L-elsbetiae_contig638:9144..17090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig638.15044.1 ID=mRNA_L-elsbetiae_contig638.15044.1|Name=mRNA_L-elsbetiae_contig638.15044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7947bp|location=Sequence derived from alignment at L-elsbetiae_contig638:9144..17090+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig638:9144..17090+ >mRNA_L-elsbetiae_contig638.15044.1 ID=mRNA_L-elsbetiae_contig638.15044.1|Name=mRNA_L-elsbetiae_contig638.15044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5814bp|location=Sequence derived from alignment at L-elsbetiae_contig638:9144..17090+ (Laminarionema elsbetiae ELsaHSoW15)back to top |