mRNA_L-elsbetiae_contig6378.15041.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.120e-23 Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 368 IKLLIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGGH-----------IDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQH 775 + L++AG+N N+RR DG TPL+ AA G+V A+ LLL AKA+PLLT SG +PLDVAA+ GH EVV ELI+Q G C G GG +DIMA+L DAGVVD G AL+ AAG GGEA +KFLL+ Sbjct: 131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCG----------GSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQ 269
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 103 bits (258), Expect = 6.130e-22 Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 2 Query: 395 NSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVR-PSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQH 775 N NSRR DG TPL+ AA G+V+A +LLL AKA+PLLT V PSG T +PLD AA+ GH EVV ELI+Q G C R + + +++IM +L +AGVVD G AL+ AAG GGE +KFLL+ Sbjct: 140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQ 269
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 101 bits (251), Expect = 9.320e-21 Identity = 65/126 (51.59%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 416 DGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHR---GGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHK 778 DG T LH+AA+ G V ++ LLR ANPLL P G+T VPLD+AAK GH +VVRELIQ+ G + C H H+DIMA+L +AGVVD G+AL AAG G EA+VKFLL+H+ Sbjct: 239 DGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELG--IEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHR 362
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7FXF2_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF2_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.360e-19 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 365 LIKLLIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVR--PSGHTHVPLDVAAKG-HLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQH 775 +++ +++AG N + R G T L AA G ++ +++LL A ANPLLT P G V LD AA+G H VVR +I G C G +D+MA+L+D GVVD G AL+ AA CG EA+VKFLLQ Sbjct: 30 VMRAMVKAGVNVDRRHHSGATALSAAASDGQLDIVEVLLGANANPLLTTPNSLPGGPPLVALDAAARGGHAVVVRRMIGHLGIEGCG----------GATNQRMDVMAILVDVGVVDNGYALVGAAACGAEASVKFLLQQ 159
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 3.280e-19 Identity = 61/117 (52.14%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 377 LIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLT-FVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQA 718 L+EAGAN NSRRFDG TPL +AA G+V+A++LLL AK +PLLT + S +PLDVAA GHLEVV ELI+Q G C R + R H+D++ +L +AGVVD G A Sbjct: 36 LLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLA 152
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 8.920e-19 Identity = 56/117 (47.86%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 1 PRATMNEGLHFAACNGLTQRTVSLLLGGVVDIDQGGVDGFTPLMLAAGRGHLRIVEILLNKGANVTAVGGLGGSALHGSVQGGYLAVTKLLLKAGAGLEVAMPTEGCTPLHLAAEHG 351 PR NE LHFAA G TQRT ++L G+++I+QG DG+TPLM+A+ RG+ RIV IL+ +GANV V LG +A AGA LE A T G PLHLAA+ G Sbjct: 10 PRGPKNE-LHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKG 125
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 3.160e-16 Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 2 Query: 425 TPLHVAADMGHVNAIKLLLRAKANPLLTFVRP-SGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW--CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDK-GQALISAAGCGGEAAVKFLLQHK 778 TPL++AA GH+ A+K+LL AKANPLLT SG + VPL+VAA+ G VVREL+++ G R C R G +DIM+++M AGVVD G AL++A G G EAAV FLL+ + Sbjct: 14 TPLYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQ 136
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 2.660e-15 Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 25 LHFAACNGLTQRTVSLLLGGVVDIDQGGVD-GFTPLMLAAGRGHLRIVEILLNKGANVTAVGGLGGSALHGSVQGGYLAVTKLLLKAGAGLEVAMPTEGCTPLHLAAEHG 351 L+ AA +G +RTV++L G V+ID G D G TPLM A+ G+LR+V +LL GA V+ G +ALH S+ +LAV+K L+KAGAG+E A +G TPLH+AA G Sbjct: 8 LYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVE-ARGVDG-TPLHVAAAKG 115
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.780e-15 Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 25 LHFAACNGLTQRTVSLLLGGVVDIDQGGVD-GFTPLMLAAGRGHLRIVEILLNKGANVTAVGGLGGSALHGSVQGGYLAVTKLLLKAGAGLEVAMPTEGCTPLHLAAEHG 351 L+ AA +G +RTV++L G VDID G D G TPLM A+ G+LR+V +LL GA V+ G +ALH S+ +LAV++ L+KAGAG+E A +G TPLH+AA G Sbjct: 8 LYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVE-ARGVDG-TPLHVAAAKG 115
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.760e-14 Identity = 65/181 (35.91%), Postives = 84/181 (46.41%), Query Frame = 2 Query: 371 KLLIEAGANSNSRRFDGVTPLHVAADMG---------------------------------HVNAIKLLLRAKANPLLTFVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG-----------HIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHK 778 K+L++AGA+ + +G TPLH+ AD G RAKANPLLT SG T VPLD AA+ G EVV+EL+QQ + C G GG ++D+MA+L D GV+D G+ALI+AAG EA VK LLQ + Sbjct: 101 KMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCG----------GASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQQR 271 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6378.15041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6378.15041.1 >prot_L-elsbetiae_contig6378.15041.1 ID=prot_L-elsbetiae_contig6378.15041.1|Name=mRNA_L-elsbetiae_contig6378.15041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp MNEGLHFAACNGLTQRTVSLLLGGVVDIDQGGVDGFTPLMLAAGRGHLRIback to top mRNA from alignment at L-elsbetiae_contig6378:3797..4574- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6378.15041.1 ID=mRNA_L-elsbetiae_contig6378.15041.1|Name=mRNA_L-elsbetiae_contig6378.15041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=778bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:3797..4574- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6378:3797..4574- >mRNA_L-elsbetiae_contig6378.15041.1 ID=mRNA_L-elsbetiae_contig6378.15041.1|Name=mRNA_L-elsbetiae_contig6378.15041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:3797..4574- (Laminarionema elsbetiae ELsaHSoW15)back to top |