mRNA_L-elsbetiae_contig6372.15034.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A6H5JD70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD70_9PHAE) HSP 1 Score: 287 bits (734), Expect = 8.870e-91 Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEPPHYTSGSSDLGSDE 481 GMTPIAACFSCLLYSWWTNTSFRGPLLLCS +L+VGNFLYGLALTYDAFWMVLVGR+LIGLGGARGVNRRYIADTIPI RTAYSAAFVAAGA+GMAFGPA+SAV V+FT+AGVEFNGLTNPGWIMFVLW+++G +IQ EFQEPPHY S +SDLGSDE Sbjct: 220 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSAMLIVGNFLYGLALTYDAFWMVLVGRLLIGLGGARGVNRRYIADTIPIASRTAYSAAFVAAGALGMAFGPAVSAVVIAVDFTLAGVEFNGLTNPGWIMFVLWVVMGALIQYEFQEPPHYMSDNSDLGSDE 379
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: D8LS38_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS38_ECTSI) HSP 1 Score: 287 bits (734), Expect = 2.880e-90 Identity = 139/160 (86.88%), Postives = 149/160 (93.12%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEPPHYTSGSSDLGSDE 481 GMTPIAACFSCLLYSWWTNTSFRGPLLLCS +L+VGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPI RTAYSAAFVAAGA+GMAFGPALSAV +FT+AGV+FNGLTNPGWIM VLW+I+G +IQ EFQEPP YTSG+SDLGSDE Sbjct: 281 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSAMLIVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIASRTAYSAAFVAAGALGMAFGPALSAVLIAADFTLAGVQFNGLTNPGWIMLVLWVIMGALIQYEFQEPPQYTSGNSDLGSDE 440
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A835YJ60_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ60_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.540e-62 Identity = 100/146 (68.49%), Postives = 124/146 (84.93%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 GMTPIAAC SC +YS+WTNTSF+GPLL C+VLL+VGN +YGLAL+YDAFWMVLVGR+LIGLGGARGVNRRYIADT+P+ DRT +SA+FVA GA+GMAFGP +AV N ++F + V+ NGLT PGW MF++W +LG ++F+EP Sbjct: 374 GMTPIAACISCGVYSYWTNTSFKGPLLACAVLLIVGNIMYGLALSYDAFWMVLVGRLLIGLGGARGVNRRYIADTVPMEDRTFFSASFVAVGALGMAFGPFAAAVINLLDFEIGFVKVNGLTGPGWFMFIMWTLLGLATLIKFKEP 519
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A2K1L6U4_PHYPA (SPX domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6U4_PHYPA) HSP 1 Score: 150 bits (379), Expect = 3.210e-39 Identity = 70/146 (47.95%), Postives = 104/146 (71.23%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 G P++A S L+YSWW+N S+ PL++ +++L+ GN +Y LAL +++ W++L+GR L GLGGAR +NRRYI+D +P T+ SAAFV+A A+GMA GPAL+ + +NF + G N +T+PGW+MFV W I +I + F+EP Sbjct: 314 GSMPLSALVSSLVYSWWSNFSYTSPLIVSTLVLIAGNLMYALALPFNSIWLLLLGRFLCGLGGARAINRRYISDHVPTKQLTSASAAFVSASALGMAVGPALAGALSKLNFKIYGAPVNFVTSPGWMMFVAWAIYLLLIVLFFKEP 459
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A2K1JKD7_PHYPA (SPX domain-containing protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JKD7_PHYPA) HSP 1 Score: 150 bits (379), Expect = 3.560e-39 Identity = 71/152 (46.71%), Postives = 107/152 (70.39%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAG-VEFNGLTNPGWIMFVLWIILGWIIQVEFQEPPHYTS 454 G P+AA S L+YSWW+N S++ PL++ S +L+ GNFLY +AL +D+ W++L+GR L GLGGAR +NRRYI D +P+ T+ SAAF++A A+GMA GPAL+ + + +NF + G + N +T PGW++F+ W + I+ F+EP T+ Sbjct: 345 GSMPLAALVSALVYSWWSNFSYKAPLIVSSFILMAGNFLYAIALHFDSVWLLLIGRFLCGLGGARAINRRYICDHVPLKQLTSASAAFISASALGMAVGPALAGLLSRINFKIYGTLPVNFVTAPGWLLFLSWSLYLIIVLFFFKEPDRATA 496
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A3R7J3A5_9STRA (SPX domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J3A5_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.270e-39 Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGV-NFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 GMTP+A+ S +LYSWW N S++ L +V L++GN LYGLALTYD+ M L GRML G GGAR +NRRYIAD +RT SA FV A A+GMA GPAL+A + + ++++AGVE T+PGW+MFVLW + + + F+EP Sbjct: 296 GMTPVASLASAVLYSWWANRSYKASLSFATVCLILGNLLYGLALTYDSVAMALAGRMLNGFGGARAINRRYIADNYSREERTQASALFVTASALGMAGGPALAAALHYLPDYSIAGVEITTETSPGWVMFVLWSVYLVALVLWFKEP 442
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A2K1L4D7_PHYPA (SPX domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L4D7_PHYPA) HSP 1 Score: 149 bits (375), Expect = 1.140e-38 Identity = 69/146 (47.26%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 G P+AA S L+YSWW+N S+ PLL+ +++L+ GN +Y LAL +++ W++L+GR L GLGGAR +NRRYI+D +P+ T+ SAAFV+A A+GMA GPAL+ + +NF + G N +T+PGW++F W +I + F+EP Sbjct: 313 GSMPLAALVSSLIYSWWSNFSYTAPLLISTLILMAGNLMYALALYFNSIWLLLLGRFLCGLGGARAINRRYISDHVPVKQLTSASAAFVSASALGMAVGPALAGALSKLNFKIYGAPVNFVTSPGWLLFAAWAGYFLLIVLFFKEP 458
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A8K1CQA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQA2_PYTOL) HSP 1 Score: 148 bits (374), Expect = 1.260e-38 Identity = 77/147 (52.38%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFN-GVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 GMTPIA+ S +LYSWW N S++ PLL +V LV+GN LYGLAL Y++ M + GR+L G GGAR +NRRYIAD +RT SA FV A A+GMA GPAL+A + +F++ GV+ T PGW+MFV W+I I + F+EP Sbjct: 303 GMTPIASLLSAVLYSWWANRSYKSPLLFATVCLVIGNLLYGLALYYNSIAMAITGRLLNGFGGARAINRRYIADNYSREERTQASAQFVTASALGMAAGPALAAALDYAPDFSLLGVQVTVETAPGWVMFVFWLIYLLAIALFFEEP 449
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A2R5GPU0_9STRA (SPX domain-containing membrane protein At1g63010 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPU0_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.300e-38 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 2 Query: 5 MTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGVNFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEPPHYTSGSSDLGS 475 MTP+AA S + YS+W+N SF+ PLL ++LL+ GN LYGLA D M+L+GR + GLGGAR VNRRYIAD+I + RT SAAFVAAGA+GMA GP L+++F+G++ V G+ N +T P + M +W + G ++ F+EP T S S Sbjct: 320 MTPVAAMLSAIAYSYWSNYSFKAPLLCSTLLLICGNLLYGLAWDADVTVMILLGRFVTGLGGARAVNRRYIADSISMEHRTRASAAFVAAGALGMASGPFLASIFSGMDLVVLGLTMNEMTAPSFFMVAIWTLYGCLVIFFFKEPRRETGKSKSRPS 476
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Match: A0A3R7JSJ4_9STRA (Calcium-transporting ATPase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JSJ4_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.690e-38 Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 2 GMTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMVLVGRMLIGLGGARGVNRRYIADTIPIVDRTAYSAAFVAAGAVGMAFGPALSAVFNGV-NFTVAGVEFNGLTNPGWIMFVLWIILGWIIQVEFQEP 439 GMTP+A+ S +LYSWW N S++ L +V L++GN LYGLALTYD+ M L GRML G GGAR +NRRYIAD +RT SA FV A A+GMA GPAL+A + + ++++AGVE T+PGW+MFVLW + + + F+EP Sbjct: 1351 GMTPVASLASAVLYSWWANRSYKASLSFATVCLILGNLLYGLALTYDSVAMALAGRMLNGFGGARAINRRYIADNYSREERTQASALFVTASALGMAGGPALAAALHYLPDYSIAGVEITTETSPGWVMFVLWSVYLVALVLWFKEP 1497 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6372.15034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6372.15034.1 >prot_L-elsbetiae_contig6372.15034.1 ID=prot_L-elsbetiae_contig6372.15034.1|Name=mRNA_L-elsbetiae_contig6372.15034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp MTPIAACFSCLLYSWWTNTSFRGPLLLCSVLLVVGNFLYGLALTYDAFWMback to top mRNA from alignment at L-elsbetiae_contig6372:7545..10179- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6372.15034.1 ID=mRNA_L-elsbetiae_contig6372.15034.1|Name=mRNA_L-elsbetiae_contig6372.15034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2635bp|location=Sequence derived from alignment at L-elsbetiae_contig6372:7545..10179- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6372:7545..10179- >mRNA_L-elsbetiae_contig6372.15034.1 ID=mRNA_L-elsbetiae_contig6372.15034.1|Name=mRNA_L-elsbetiae_contig6372.15034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=966bp|location=Sequence derived from alignment at L-elsbetiae_contig6372:7545..10179- (Laminarionema elsbetiae ELsaHSoW15)back to top |