mRNA_L-elsbetiae_contig6369.15029.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6369.15029.1
Unique NamemRNA_L-elsbetiae_contig6369.15029.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A6A7G741_9CRUS (Uncharacterized protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G741_9CRUS)

HSP 1 Score: 228 bits (581), Expect = 6.200e-69
Identity = 126/273 (46.15%), Postives = 175/273 (64.10%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGIVPDHATSA------VSALMPIGGTQAEKFHRNAIATTDTPEGATGGSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACVDLELGEKLVRAEELDSSIMRLGSNQRFASAIRAGEALLKLYGPLCASPRMYSRTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGD--NDPTVIKFKHLANHPETHRNYL 795
            KG+G FALR FKRG+KIM ERP+L S  G+VP  A  A      V  L+P  G+  +KF RNA++  +  +GA+G      LF+ MSRVNH C+ N LH  +    Q +K+LVAS +I AGDEITF Y  I  G      R+    ++++F C CLAC D  +G  L+RA+ELD  I++LGS+  FA +IRAG++LL++Y  L +SP+MY RTYYD+FQ+A+T++ TL +  KY+K A + +  FYG    ND  V ++    +HP +HRNYL
Sbjct:   64 KGVGIFALRTFKRGEKIMVERPILYSRSGLVPVDADVAPGAQWAVDLLLPRDGSLQDKFDRNAMSCAED-QGASG------LFITMSRVNHDCVGNTLHHYV--DSQGVKILVASHEILAGDEITFSYTDIVRG------RRTFLAQKFDFSCGCLACTDPSIGNLLLRAKELDQKIIQLGSSGNFAGSIRAGKSLLRIYDSLQSSPKMYLRTYYDMFQMAITKRSTLQDGIKYMKRAMQFALEFYGEQLKNDEIVTQYAKYLSHPSSHRNYL 321          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A1E7ESY5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ESY5_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.190e-50
Identity = 115/273 (42.12%), Postives = 158/273 (57.88%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTS-PGG------IVPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGATGGSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACVDLELGEKLVRAEELDSSIMRLGSNQRFASAIRAGEALLKLYGPLCASPRMYSRTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNYLI 798
            KGLG FA+RDF RG+KI+ ER ++T  P G      +   +   AV AL  +G    EKF  N +A     E   G     GLFV+ SRVNH CI N+ H      G  +++LVAS DI AG EITF Y G G   +     + + +    F C+CLAC  L++  KL R  +LD +IM LGSN     ++RAG+ALL+LY    +S  MYSRTYYDLFQ+A+T+++TL +   +I+ A     LFYG + + +V K+K    +P +HRNY +
Sbjct:   83 KGLGLFAMRDFSRGEKILVERAVITRRPIGPPIQEAMEDPNVAKAVMALAGVG--LHEKFVTNCVALGGHEEADAGS----GLFVHFSRVNHDCIGNSAHYYDPKIG--LEILVASHDITAGLEITFSYVG-GDDTE----ERAMKLSLRGFTCTCLACQTLDVASKLDRMIQLDRNIMVLGSNGHIDESLRAGKALLELYVEFQSSDMMYSRTYYDLFQLAITKRKTLKQGGFFIQKAYEHGLLFYGREENDSVRKYKKYVLNPSSHRNYRV 342          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A7R9ZGI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGI6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.440e-22
Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPG-GIVPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGATGGSEEQGLFVNMSRVNHACIANALHG-SIRMSGQNIKLLVASVDIPAGDEITFPY 366
            KG G FALRDF + DKIMAERP+L +P     P  A  AV+AL+P GG+  EK  RN++A  D+ +G+ GG     LF+ MSRV H C+ N++H  S R+    +K+LVAS  I AG+EI F Y
Sbjct:   76 KGFGIFALRDFSKNDKIMAERPILRAPFLQQAPASARDAVAALVPHGGSLEEKIGRNSMACDDSADGSNGG-----LFIIMSRVTHDCLGNSIHHFSDRLQ---VKILVASKAILAGEEIAFSY 191          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A7S0JB58_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JB58_9EUKA)

HSP 1 Score: 84.0 bits (206), Expect = 1.920e-16
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  499 LDSSIMRLGSNQRFASAIRAGEALLKLYGPLCASPRMYSRTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNYLI 798
            +D  I+  G  +++   IR   AL+K+Y  L   P++YSRTYYDLFQ+A+ R+ TL +A  Y++ A     L  G   D TV +++ L   P +H  +LI
Sbjct:    1 MDQIILECGKRRQYDRGIRCANALIKIYDELGEHPKVYSRTYYDLFQLAIARRSTLDKANGYLRLALEHRKLLVGDTPDETVREYEQLMKTPSSHMGFLI 100          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: Q6MWN4_NEUCS (Uncharacterized protein B22K18.010 n=4 Tax=Neurospora TaxID=5140 RepID=Q6MWN4_NEUCS)

HSP 1 Score: 80.9 bits (198), Expect = 1.750e-13
Identity = 90/303 (29.70%), Postives = 131/303 (43.23%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGI-------VPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGAT--------------------GGSEEQGLFVNMSRVNHACIANALHG-SIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACV---DLELG--EKLVRAEELDSSIMRLGSNQRFA-SAIRAGEALLKLYGPLCASPRMYSRTYYDLFQV-AVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNYLICG 804
            KG G  A +D  +G +IMAE+PL   P  +       V  H T  +  L        +K  + A  +     G T                    GG    GLF+  SR+NHAC  N  +  + R++ + I    A  DI  G+EIT  Y  IG  A     RQ I   ++NF C+C  C    DL     E+L     LD +I+  GSN +     +R   +LL   G    + ++Y R YYD FQ+ A T  +  + A + I+ A   +    G D++ TV  F+ LA +P  H  + + G
Sbjct:   18 KGTGVIATQDIAKGTRIMAEKPLFIVPTNVMERGMQVVEKHLTEQLKTL--------DKDQQRAFLSLHNCHGTTFSPFLAICKTNMLGLGSPPIGG----GLFIEASRINHACNPNTQNSWNSRINRETIH---AVRDIKKGEEITISY--IGHFAPYV-ERQSILKIKFNFDCTCELCSLPPDLRRASDERLATIHRLDQAILSAGSNVKLGLGMVRRMLSLLDDEGTY--NSQVY-RAYYDAFQMMAATDDK--ARAGELIRMALEHARTVEGNDSE-TVKNFERLAANPTRHMAWGLYG 296          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: F7W9P1_SORMK (WGS project CABT00000000 data, contig 2.53 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7W9P1_SORMK)

HSP 1 Score: 76.3 bits (186), Expect = 6.730e-12
Identity = 81/296 (27.36%), Postives = 126/296 (42.57%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGIVPDHATSAVSALMP--IGGTQAEKFH-----RNAIATTDTPEGATGGSEEQGL---------FVNMSRVNHACIANALHG-SIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACV-----DLELGEKLVRAEELDSSIMRLGSNQRFASAIRAGEALLKLYGPLCASPRMYS----RTYYDLFQV--AVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNYLICG 804
            KG G  A +D  +G +IMAE+PL   P  I+       V   +   + G   ++ H      N   T  +P  A   +   GL         F+  SR+NHAC  N  +  + R+S + I    A  DI  G+EIT  Y G          RQ     ++ F C+C  C       +   E+L    ELD +I+  G N      ++ G  +++    L  +  MY+    R YYD FQ+  A+  K   + A + I+ +   + +  G D+   V KF+ LA +P  H  + + G
Sbjct:   18 KGTGVVATQDIAKGTRIMAEKPLFIVPTNIM-QSGNQVVEKYIAQQLKGLDKDQQHAFLILHNCHGTNFSPFLAISKTNMLGLGSPPIGGGLFIEASRINHACKPNTQNSWNERISRETIH---AVRDIKKGEEITISYMGHFASYD---ERQAFLKDKFKFDCACEVCSLPPDQRMASDERLTTVHELDQAILSAGRN------VKLGLRMVRKMLLLLETEGMYNSQVYRAYYDAFQMMAAIDDK---ARAGEMIRMSLEHARVVEGHDSK-IVKKFERLAANPTRHMAWGLYG 296          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A395NP96_TRIAR (Set domain-containing 5 n=1 Tax=Trichoderma arundinaceum TaxID=490622 RepID=A0A395NP96_TRIAR)

HSP 1 Score: 76.3 bits (186), Expect = 8.110e-12
Identity = 82/303 (27.06%), Postives = 119/303 (39.27%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGG-----IVPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGATG--------------GSE--EQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLV--ASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACV-----DLELGEKLVRAEELDSSIMRLG-SNQRFASAIRAGEALLKLYGPLCASPRMYSRTYYDLFQVAV-----TRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNY-LICG 804
            KG G  A     +G +I++E PL   P       +V D    AV  L        +K  + A  +     G                 GSE  E  +F+  SR+NHAC  NA +       +NI+ L   A  DI  G+EIT  Y G          RQ    + + F C C  C        E   +L + + +D++I  LG S   +  A+    A+ +L+           R YYD FQ+AV     TR +  +E        A  + +   GD+ P   + K LA +P  H  Y L+ G
Sbjct:   28 KGQGLIATSRILKGTRILSEAPLFKVPRNTSDLKVVNDLIVKAVKGL--------DKAQQRAFLSLHNAHGRDKQPFLGISRTNALPLGSEAREGAIFLEASRINHACRHNAQN----TWNENIRRLTIHAVRDIEEGEEITISYLG---ATSDYAERQAFLKRTFFFDCGCELCSLPPAQRAESDLRLRKIQFIDNTIASLGDSMSEYKDALHLVNAMFRLFKEEGVWDASIPRAYYDAFQIAVANGDDTRAKVFAER-------AHAARVIVEGDDSPVAARLKQLAANPRRHPAYGLVVG 308          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A8K0REH6_9PLEO (Uncharacterized protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0REH6_9PLEO)

HSP 1 Score: 75.5 bits (184), Expect = 1.480e-11
Identity = 75/284 (26.41%), Postives = 119/284 (41.90%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGI--VPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGATG-----------GSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACVDLELGEKL---VRAEELDSSIMRLGSNQRFASAIRAG----EALLKLYGPLCASPRMYSRTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNY 792
            KG G  A+RD  RG +I++ERPL T P     +     + +  L  +   Q + F+R   A  D  + A G           GS+  GLF+  SR+NHAC +NA   +   + + + +  A  DI   +EI   Y     G     +RQ      + F C+C  C  L L ++    +R+EE+      +G  +    A  A     + +++             RTYYD  Q+A+      + AK + + A     +  G D+ P   + K     P +HR Y
Sbjct:   36 KGQGLVAIRDLFRGTRILSERPLFTVPRDTRSLQVAKKAVLRNLKSLSDEQRKAFYRLHNAHGDDEDSALGIARTNTLPLGAGSDTGGLFLQASRINHACNSNA-QNTWNSNTEQLNIH-ACRDITKDEEICISYLD---GWDNYASRQRNLKNHFGFTCTCTLC-SLPLAQREQSDLRSEEMTRLDSIVGDGRSIVIAPLACLYHVQTMIQFMAEEHIDDARIPRTYYDALQIAIAHG-DQARAKVFAERAYSNRRVLEG-DDSPETKRVKEFMERPSSHRLY 311          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: J3P709_GAET3 (SET domain-containing protein n=1 Tax=Gaeumannomyces tritici (strain R3-111a-1) TaxID=644352 RepID=J3P709_GAET3)

HSP 1 Score: 73.2 bits (178), Expect = 1.460e-10
Identity = 85/287 (29.62%), Postives = 118/287 (41.11%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGIVP-----DHATSAVSALMPIGGTQAEKFHRNAIATTDTPE-GAT--------GGSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACV-----DLELGEKLVRAEELDSSIMRLGSN-QRFASAIRA---GEALLKLYGPLCASPRMYSRTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNY 792
            KGLG  A     +G +I++E PL   P   +      D  +  V+AL      QA    RN+     T E G T          +   G+F+  SR+NHAC+ NA +      G     + A  DI  G+EIT  Y            RQ    + + F CSC  C+           +L   + LD SI   G   Q  AS ++A      LLKL+          SR YYD FQ+AV      + A+ + + AA   ++  G D+ PTV + K  A  P  H  Y
Sbjct:   18 KGLGLVATTKIAKGTRILSEAPLFRVPQSTISKKQVCDSLSKKVAALSD-DKRQAFFSLRNSFEDEATRELGITRTNALPIGSNAATGGIFLEASRINHACLQNAQN--TWNEGLQQLTIHAIRDINQGEEITIMYIEDRANRAA---RQRTLQRDFRFTCSCQLCLLPPSLRASSDARLDEIQRLDKSI---GDGIQITASPLQALHNVRKLLKLFEEEGLQDASVSRAYYDAFQIAVVHG-DRARARVFGERAAATRAIVEG-DDSPTVRRMKDQARDPTRHPTY 293          
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Match: A0A0C4E827_MAGP6 (MYND-type zinc finger protein samB n=1 Tax=Magnaporthiopsis poae (strain ATCC 64411 / 73-15) TaxID=644358 RepID=A0A0C4E827_MAGP6)

HSP 1 Score: 72.8 bits (177), Expect = 2.330e-10
Identity = 82/289 (28.37%), Postives = 119/289 (41.18%), Query Frame = 1
Query:    1 KGLGTFALRDFKRGDKIMAERPLLTSPGGI-----VPDHATSAVSALMPIGGTQAEKFHRN----------AIATTDTPEGATGGSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDEITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLAC-----VDLELGEKLVRAEELDSSIMRLGSN-QRFASAIRAGEALLKLYGPLCASPRMYS----RTYYDLFQVAVTRKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNY 792
            KGLG  A     +G +I++E PLL  P        V +  ++ V+AL           H +           + T   P G+  G    G+FV  SR+NHACI NA +      G     + A  DI  G+EIT  Y            RQ    + + F CSC  C     +      +L   + LD S+   G   Q   S ++A   + KL   LC    ++     R YYD  Q+AV      + A+ + + AA   ++  G D+ PTV + K LA  P  H +Y
Sbjct:   18 KGLGLVAATKIAKGTRILSEAPLLRVPRFTNSKEQVRESLSNKVAALSDDKRQAFFSLHNSFEDETTRELGIVRTNTLPLGSNAGMG--GIFVEASRINHACIQNAQN--TWNEGLQQLTIHAIRDINRGEEITIIYLTDRTNYAA---RQRTLQRNFRFTCSCQLCSLPPSLRASSDARLDEIQRLDESV---GDGIQITVSPLQALHDVRKLL-KLCEDEGLHDASVPRAYYDALQIAVVNG-DRARARVFGERAAATRAIMEG-DDSPTVRRMKDLARDPTRHPSY 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6369.15029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7G741_9CRUS6.200e-6946.15Uncharacterized protein n=1 Tax=Hirondellea gigas ... [more]
A0A1E7ESY5_9STRA1.190e-5042.12Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7R9ZGI6_9STRA5.440e-2249.19Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0JB58_9EUKA1.920e-1638.00Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
Q6MWN4_NEUCS1.750e-1329.70Uncharacterized protein B22K18.010 n=4 Tax=Neurosp... [more]
F7W9P1_SORMK6.730e-1227.36WGS project CABT00000000 data, contig 2.53 n=1 Tax... [more]
A0A395NP96_TRIAR8.110e-1227.06Set domain-containing 5 n=1 Tax=Trichoderma arundi... [more]
A0A8K0REH6_9PLEO1.480e-1126.41Uncharacterized protein n=1 Tax=Paraphoma chrysant... [more]
J3P709_GAET31.460e-1029.62SET domain-containing protein n=1 Tax=Gaeumannomyc... [more]
A0A0C4E827_MAGP62.330e-1028.37MYND-type zinc finger protein samB n=1 Tax=Magnapo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6369contigL-elsbetiae_contig6369:5083..6859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.1
Seed ortholog evalue1.2e-26
Seed eggNOG ortholog55529.EKX51628
KEGG koko:K11426,ko:K20346
KEGG TC9.B.188
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03036,ko04131
Exons3
Model size1082
Cds size756
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6369.15029.1prot_L-elsbetiae_contig6369.15029.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6369 5134..6584 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816702.8224008-UTR-L-elsbetiae_contig6369:5082..51331622816702.8224008-UTR-L-elsbetiae_contig6369:5082..5133Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6369 5083..5133 +
1691683751.7254322-UTR-L-elsbetiae_contig6369:5082..51331691683751.7254322-UTR-L-elsbetiae_contig6369:5082..5133Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6369 5083..5133 +
1622816702.8704786-UTR-L-elsbetiae_contig6369:6584..68591622816702.8704786-UTR-L-elsbetiae_contig6369:6584..6859Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6369 6585..6859 +
1691683751.7646992-UTR-L-elsbetiae_contig6369:6584..68591691683751.7646992-UTR-L-elsbetiae_contig6369:6584..6859Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6369 6585..6859 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816702.8343432-CDS-L-elsbetiae_contig6369:5133..54001622816702.8343432-CDS-L-elsbetiae_contig6369:5133..5400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 5134..5400 +
1691683751.7359731-CDS-L-elsbetiae_contig6369:5133..54001691683751.7359731-CDS-L-elsbetiae_contig6369:5133..5400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 5134..5400 +
1622816702.8500142-CDS-L-elsbetiae_contig6369:5727..60481622816702.8500142-CDS-L-elsbetiae_contig6369:5727..6048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 5728..6048 +
1691683751.7460263-CDS-L-elsbetiae_contig6369:5727..60481691683751.7460263-CDS-L-elsbetiae_contig6369:5727..6048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 5728..6048 +
1622816702.8609984-CDS-L-elsbetiae_contig6369:6416..65841622816702.8609984-CDS-L-elsbetiae_contig6369:6416..6584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 6417..6584 +
1691683751.7554362-CDS-L-elsbetiae_contig6369:6416..65841691683751.7554362-CDS-L-elsbetiae_contig6369:6416..6584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6369 6417..6584 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6369.15029.1

>prot_L-elsbetiae_contig6369.15029.1 ID=prot_L-elsbetiae_contig6369.15029.1|Name=mRNA_L-elsbetiae_contig6369.15029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MAERPLLTSPGGIVPDHATSAVSALMPIGGTQAEKFHRNAIATTDTPEGA
TGGSEEQGLFVNMSRVNHACIANALHGSIRMSGQNIKLLVASVDIPAGDE
ITFPYNGIGCGAKVCGNRQVIFMKRWNFRCSCLACVDLELGEKLVRAEEL
DSSIMRLGSNQRFASAIRAGEALLKLYGPLCASPRMYSRTYYDLFQVAVT
RKRTLSEAKKYIKAAARESSLFYGGDNDPTVIKFKHLANHPETHRNYLIC
G*
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mRNA from alignment at L-elsbetiae_contig6369:5083..6859+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6369.15029.1 ID=mRNA_L-elsbetiae_contig6369.15029.1|Name=mRNA_L-elsbetiae_contig6369.15029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1777bp|location=Sequence derived from alignment at L-elsbetiae_contig6369:5083..6859+ (Laminarionema elsbetiae ELsaHSoW15)
AAAGGCTTGGGAACTTTCGCTCTGCGAGACTTCAAACGAGGGGACAAGAT TATGGCGGAGAGACCCTTGCTGACGAGCCCTGGAGGGATCGTTCCCGACC ATGCCACTAGCGCCGTGAGCGCTTTGATGCCCATCGGTGGAACCCAGGCC GAAAAATTCCACCGGAACGCTATCGCTACCACTGACACGCCTGAAGGAGC AACGGGAGGCTCTGAGGAGCAGGGCCTGTTTGTCAACATGTCCCGGGTCA ACCACGCCTGCATCGCCAACGCTCTGCACGGCTCGATCCGCATGTCGGGC CAGAACATTAAGCTTTTGGTAGGTTCCATCGAACATTGGTTCCCAGGGTC CATAACTGTCTCTCTGTCATCCGAAGATTATTTACGGTAGGCATTCGGCG GGTTGTACTCGCGGAAGGCCTGCATATTTCGCACTGGCCACTTAAGCAGC TTACGTTCACGGCCGCCATGCCCCCTAGCGTATTTAGATTCCTACCAATC AGTGTGAATCTCTGTACGAGGTGCAACTTTTCAAAGAAAACGCCGGCGAA ACAATGGCCGCCTTTGATCTCTCGTACCCTATGTAGAAATGTGATGGTGT TATTCTCCGCTCTCGTCTGTCACTCCTACATTGTATCCTCCTCAGGTGGC TTCAGTGGATATTCCAGCTGGCGACGAGATCACGTTTCCCTACAACGGCA TCGGCTGCGGTGCGAAGGTCTGCGGAAACAGGCAGGTGATATTCATGAAG CGATGGAACTTCCGCTGCTCATGCTTAGCGTGTGTCGACCTTGAGCTCGG CGAAAAGCTGGTTCGCGCCGAGGAGCTTGATAGCTCCATTATGAGGCTGG GAAGCAATCAGCGCTTCGCGAGCGCCATCAGGGCGGGAGAAGCTCTGCTC AAGCTGTATGGACCACTGTGTGCTTCGCCCAGGATGTACTCTCGCACGTA CTACGACCTGTTTCAGGTAAAGTGGGGAGGACATACGAGTGGGCACTCGG ATAACGCTCGTCGCGAGGAACCCTGGATATAGACACTTCAGGAAGTTCAT ACTTCACTGCAGTGTCCAGGTCTTCAAGCGCCACAACGACCACACGGGGA CATTGCAGATACGAAGGGCACCCGATAACCAGATTGTTGACAGTCGGCAG GTAAACTCACTACTCTCACGTGTACATCTGTATATTGTTTTGTATTCTTC TCTAGCTTGTGCCCGCGCTCGTCTTTTAAGACCCAGTGCTTGTTAATTCA ATCGACTTTTCTTGCAAACCATTCTCTGCGTAGAAAGAACGAAGATATAC ACCTCTTACGAAACGACTTCATCGTTCTTTGCAGGTCGCCGTGACGAGGA AGCGCACCCTCTCTGAAGCGAAGAAGTACATCAAGGCTGCTGCGCGCGAG AGCTCTCTCTTCTACGGCGGAGACAACGATCCCACCGTGATCAAGTTCAA ACACCTGGCAAATCACCCGGAAACCCACCGGAACTACTTGATCTGCGGTT GATATTAAGGCCTATTGCGTGCAGATCGATGCAGTCCCTGGCCCTTAGCA TACTCAGGGCAAGCTAAGAGCTCTATCGGCTGGGCACTAGTAACAGCCGA CAATTTGGCATTAAACGTTTTTTCCTCACAGCTGATTCCTGACACCGCAC ATTATTAGTAGCGCGAACACGTGAATGCTTGCGCGGGCGCGCGAACGTGT GAGGATGGCAGCAGGACTTCAGATGAGGGGAGCGCACGTGCCCGGATAAA TACAATGCATCATTAGCGAAAGGTCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6369:5083..6859+

>mRNA_L-elsbetiae_contig6369.15029.1 ID=mRNA_L-elsbetiae_contig6369.15029.1|Name=mRNA_L-elsbetiae_contig6369.15029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig6369:5083..6859+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGAGAGACCCTTGCTGACGAGCCCTGGAGGGATCGTTCCCGACCA
TGCCACTAGCGCCGTGAGCGCTTTGATGCCCATCGGTGGAACCCAGGCCG
AAAAATTCCACCGGAACGCTATCGCTACCACTGACACGCCTGAAGGAGCA
ACGGGAGGCTCTGAGGAGCAGGGCCTGTTTGTCAACATGTCCCGGGTCAA
CCACGCCTGCATCGCCAACGCTCTGCACGGCTCGATCCGCATGTCGGGCC
AGAACATTAAGCTTTTGATGGCGGAGAGACCCTTGCTGACGAGCCCTGGA
GGGATCGTTCCCGACCATGCCACTAGCGCCGTGAGCGCTTTGATGCCCAT
CGGTGGAACCCAGGCCGAAAAATTCCACCGGAACGCTATCGCTACCACTG
ACACGCCTGAAGGAGCAACGGGAGGCTCTGAGGAGCAGGGCCTGTTTGTC
AACATGTCCCGGGTCAACCACGCCTGCATCGCCAACGCTCTGCACGGCTC
GATCCGCATGTCGGGCCAGAACATTAAGCTTTTGGTGGCTTCAGTGGATA
TTCCAGCTGGCGACGAGATCACGTTTCCCTACAACGGCATCGGCTGCGGT
GCGAAGGTCTGCGGAAACAGGCAGGTGATATTCATGAAGCGATGGAACTT
CCGCTGCTCATGCTTAGCGTGTGTCGACCTTGAGCTCGGCGAAAAGCTGG
TTCGCGCCGAGGAGCTTGATAGCTCCATTATGAGGCTGGGAAGCAATCAG
CGCTTCGCGAGCGCCATCAGGGCGGGAGAAGCTCTGCTCAAGCTGTATGG
ACCACTGTGTGCTTCGCCCAGGATGTACTCTCGCACGTACTACGACCTGT
TTCAGGTGGCTTCAGTGGATATTCCAGCTGGCGACGAGATCACGTTTCCC
TACAACGGCATCGGCTGCGGTGCGAAGGTCTGCGGAAACAGGCAGGTGAT
ATTCATGAAGCGATGGAACTTCCGCTGCTCATGCTTAGCGTGTGTCGACC
TTGAGCTCGGCGAAAAGCTGGTTCGCGCCGAGGAGCTTGATAGCTCCATT
ATGAGGCTGGGAAGCAATCAGCGCTTCGCGAGCGCCATCAGGGCGGGAGA
AGCTCTGCTCAAGCTGTATGGACCACTGTGTGCTTCGCCCAGGATGTACT
CTCGCACGTACTACGACCTGTTTCAGGTCGCCGTGACGAGGAAGCGCACC
CTCTCTGAAGCGAAGAAGTACATCAAGGCTGCTGCGCGCGAGAGCTCTCT
CTTCTACGGCGGAGACAACGATCCCACCGTGATCAAGTTCAAACACCTGG
CAAATCACCCGGAAACCCACCGGAACTACTTGATCTGCGGTTGAGTCGCC
GTGACGAGGAAGCGCACCCTCTCTGAAGCGAAGAAGTACATCAAGGCTGC
TGCGCGCGAGAGCTCTCTCTTCTACGGCGGAGACAACGATCCCACCGTGA
TCAAGTTCAAACACCTGGCAAATCACCCGGAAACCCACCGGAACTACTTG
ATCTGCGGTTGA
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