prot_L-elsbetiae_contig636.15021.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig636.15021.1
Unique Nameprot_L-elsbetiae_contig636.15021.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig636.15021.1 vs. uniprot
Match: A0A6H5JHJ8_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ8_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 4.330e-48
Identity = 83/107 (77.57%), Postives = 93/107 (86.92%), Query Frame = 0 
Query:   66 APHFLPFYPSIVLDTGVKMTTVPDWLRKQAPVDAAAGKEYVGRLTGKVTLKVKCSSAVRTKLLAAHKVNFIKIQYRPRILMRTWDQDGEFNSSAGQHVPVSRLLDAL 172
            APHFLPFYP+I LDTG K+  VPDWL+KQAP DAA GKEY+GRL GKVTLKV C SAVRTKLLAAHKVNF+KIQ RP +++RTWDQDGEF S AG+HVPV RLLDA+
Sbjct:    7 APHFLPFYPTIELDTGAKVKQVPDWLKKQAPEDAATGKEYIGRLMGKVTLKVACLSAVRTKLLAAHKVNFVKIQSRPCLVVRTWDQDGEFTSRAGEHVPVCRLLDAV 113
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig636.15021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHJ8_9PHAE4.330e-4877.57SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig636contigL-elsbetiae_contig636:13078..15588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig636.15021.1mRNA_L-elsbetiae_contig636.15021.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig636 13033..15588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig636.15021.1 ID=prot_L-elsbetiae_contig636.15021.1|Name=mRNA_L-elsbetiae_contig636.15021.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MSEASTSRRRGVRERRPPPVFSSSPRAAPKKVEKVQVKKARLDEVTAIPR
PSDPTAFVQAAQQAKAPHFLPFYPSIVLDTGVKMTTVPDWLRKQAPVDAA
AGKEYVGRLTGKVTLKVKCSSAVRTKLLAAHKVNFIKIQYRPRILMRTWD
QDGEFNSSAGQHVPVSRLLDALNNDSSSSVSCSIVKAGGSSSPPYSPPSS
PPTPPPTAASGRTRGASAAA
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